Literature DB >> 34866600

Improved resolution crystal structure of Acanthamoeba actophorin reveals structural plasticity not induced by microgravity.

Stephen Quirk1, Raquel L Lieberman2.   

Abstract

Actophorin, a protein that severs actin filaments isolated from the amoeba Acanthamoeba castellanii, was employed as a test case for crystallization under microgravity. Crystals of purified actophorin were grown under microgravity conditions aboard the International Space Station (ISS) utilizing an interactive crystallization setup between the ISS crew and ground-based experimenters. Crystals grew in conditions similar to those grown on earth. The structure was solved by molecular replacement at a resolution of 1.65 Å. Surprisingly, the structure reveals conformational changes in a remote β-turn region that were previously associated with actophorin phosphorylated at the terminal residue Ser1. Although crystallization under microgravity did not yield a higher resolution than crystals grown under typical laboratory conditions, the conformation of actophorin obtained from solving the structure suggests greater flexibility in the actophorin β-turn than previously appreciated and may be beneficial for the binding of actophorin to actin filaments.

Entities:  

Keywords:  Acanthamoeba castellanii; actin; actophorin; cofilin; conformational change; microgravity

Mesh:

Substances:

Year:  2021        PMID: 34866600      PMCID: PMC8647214          DOI: 10.1107/S2053230X21011419

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  30 in total

Review 1.  ADF/cofilin weakens lateral contacts in the actin filament.

Authors:  A McGough; W Chiu
Journal:  J Mol Biol       Date:  1999-08-20       Impact factor: 5.469

2.  Mathematical model for diffusion of a protein and a precipitant about a growing protein crystal in microgravity.

Authors:  Onofrio Annunziata; John G Albright
Journal:  Ann N Y Acad Sci       Date:  2002-10       Impact factor: 5.691

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Journal:  FEBS Lett       Date:  1980-11-17       Impact factor: 4.124

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Authors:  L Blanchoin; T D Pollard
Journal:  J Biol Chem       Date:  1999-05-28       Impact factor: 5.157

5.  Interactions of ADF/cofilin, Arp2/3 complex, capping protein and profilin in remodeling of branched actin filament networks.

Authors:  L Blanchoin; T D Pollard; R D Mullins
Journal:  Curr Biol       Date:  2000-10-19       Impact factor: 10.834

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

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Authors:  S Quirk; S K Maciver; C Ampe; S K Doberstein; D A Kaiser; J VanDamme; J S Vandekerckhove; T D Pollard
Journal:  Biochemistry       Date:  1993-08-24       Impact factor: 3.162

8.  Purification and characterization of actophorin, a new 15,000-dalton actin-binding protein from Acanthamoeba castellanii.

Authors:  J A Cooper; J D Blum; R C Williams; T D Pollard
Journal:  J Biol Chem       Date:  1986-01-05       Impact factor: 5.157

Review 9.  Biophysics of actin filament severing by cofilin.

Authors:  W Austin Elam; Hyeran Kang; Enrique M De la Cruz
Journal:  FEBS Lett       Date:  2013-02-05       Impact factor: 4.124

10.  Characterization of actin filament severing by actophorin from Acanthamoeba castellanii.

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Journal:  J Cell Biol       Date:  1991-12       Impact factor: 10.539

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  2 in total

1.  Structure and activity of a thermally stable mutant of Acanthamoeba actophorin.

Authors:  Stephen Quirk; Raquel L Lieberman
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2022-03-28       Impact factor: 1.056

2.  Implementation of Telescoping Boxes in Adaptive Steered Molecular Dynamics.

Authors:  Yi Zhuang; Nikhil Thota; Stephen Quirk; Rigoberto Hernandez
Journal:  J Chem Theory Comput       Date:  2022-07-13       Impact factor: 6.578

  2 in total

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