| Literature DB >> 34858663 |
Shahram Bamdad1, Fatemeh Sanie-Jahromi1, Marzieh Alamolhoda1, Nasrin Masihpour1, Mohammad-Hossein Karimi2.
Abstract
BACKGROUND: To investigate the association of glutathione s-transferase omega 2 (GSTO2) (142N > D) and transforming growth factor-β1 (TGF-β1) (869T > C) gene polymorphisms on the pathogenesis of two common types of glaucoma (including primary open-angle glaucoma (POAG) and chronic angle-closure glaucoma (CACG)) in the Iranian population.Entities:
Year: 2021 PMID: 34858663 PMCID: PMC8632431 DOI: 10.1155/2021/1061650
Source DB: PubMed Journal: J Ophthalmol ISSN: 2090-004X Impact factor: 1.909
The primer, PCR methods, restriction enzymes, and product size for TGF-β1 and GST-O2.
| Locus | Primers | Product size | Method (restriction enzyme) |
|---|---|---|---|
| GSTO2 (142N > D) | (Sense primer) 5′-AACCCTCCTAAAGCACCC-3′ | NN: 185bp | RFLP-PCR (MboI) |
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| TGF- | (Sense primer) common:5-TCCGTGGGATACTGAGACACC-3 | CC: 110bp | ARMS-PCR |
Demographics of the study population.
| Glaucoma patients |
| Male | Female | Mean age (±SD) | Glaucoma staging (AAO classification) | Clinical demographics | |||
|---|---|---|---|---|---|---|---|---|---|
| 100 | 60 | 40 | 34.66 ± 14.25 | Mild | Moderate | Severe | Mean IOP (±SD) (mmHg) | Mean CCT (±SD) ( | |
| POAG | 56 | 34 | 22 | 34.13 ± 12.9 | 20 | 21 | 15 | 19.22 ± 3.45 | 527 ± 23.81 |
| CACG | 44 | 26 | 18 | 35.33 ± 15.81 | 19 | 16 | 9 | 17.17 ± 2.02 | 510 ± 15.93 |
| Control group | 106 | 50 | 56 | 38.26 ± 12.71 | N/A | 16.31 ± 2.51 | 530 ± 18.22 | ||
CCT: central corneal thickness, IOP: intraocular pressure. The clinical demographics reported in patients are during the period they have been treated with timolol, latanoprost, and Brimogan.
The frequencies of GSTO2 (142N > D) and TGF-β1 (869T > C) genotypes in POAG, CACG patients, and control groups.
| Locus | Genotype | POAG, N (%) | CACG, N (%) | Control, N (%) | OR1 | OR2 | 95% CI1 | 95% CI2 |
|---|---|---|---|---|---|---|---|---|
| GSTo2 (N142D) | DD | 16 (28.6) | 12 (27.3) | 38 (35.8) | 0.71 | 0.54 | 0.35–1.44 | 0.25–1.14 |
| ND | 33 (58.9) | 29 (65.9) | 51 (48.1) | 1.55 |
| 0.80–2.98 | 1.00–4.33 | |
| NN | 7 (12.5) | 3 (6.8) | 17 (16.0) | 0.75 | 0.38 | 0.29–1.93 | 0.11–1.38 | |
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| TGF- | TT | 12 (21.4) | 13 (29.5) | 29 (27.4) | 0.72 | 1.11 | 0.34–1.56 | 0.51–2.42 |
| CT | 25 (44.6) | 18 (40.9) | 54 (50.9) | 0.78 | 0.67 | 0.40–1.42 | 0.33–1.36 | |
| CC | 19 (33.9) | 13 (29.5) | 23 (21.7) | 1.85 | 1.51 | 0.90–3.81 | 0.68–3.35 | |
N: number, OR: odds ratio, CI: confidence interval. ORand OR: odds of each genotype to reference in POAG and CACG patient groups/the odds of each genotype to reference for the control group. P value< 0.05. CIand CI: confidence interval of OR1 and OR2 in POAG and CACG patients groups.
The frequencies of GSTO2 (142N > D) and TGF-β1 (869T > C) genotypes in patients with glaucoma and controls after grouping according to gender.
| Locus | Genotype | Patients, male, | Control, male, | Patients, female, | Control, female, |
| OR1 | 95% CI 1 |
| OR2 | 95% CI 2 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| GSTO2 (142N > D) | DD | 20 (33.33) | 23 (46) | 8 (20) | 15 (26.78) | 4.77 (0.09) | 0.59 | 0.27–1.27 | 1.06 (0.59) | 0.68 | 0.26–1.81 |
| ND | 35 (58.33) | 19 (38) | 27 (67.5) | 32 (57.14) |
| 1.06–4.92 | 1.56 | 0.67–3.63 | |||
| NN | 5 (8.33) | 8 (16) | 5 (12.5) | 9 (16.07) | 0.48 | 0.15–1.56 | 0.75 | 0.23–2.42 | |||
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| TGF- | TT | 14 (23.33) | 10 (20) | 11 (27.5) | 13 (23.21) | 0.79 (0.67) | 1.22 | 0.49–3.04 | 5.06 (0.08) | 1.25 | 0.49–3.18 |
| CT | 28 (46.66) | 21 (42) | 15 (37.5) | 33 (58.92) | 1.21 | 0.57–2.58 |
| 0.18–0.96 | |||
| CC | 18 (30) | 19 (38) | 14 (35) | 10 (17.85) | 0.70 | 0.32–1.55 | 2.48 | 0.96–6.36 | |||
χ 1 2 and χ22 are the associations between genotype distribution and patients/control groups in male and female. OR and OR are the odds of each genotype to reference in the patients group/the odds of each genotype to reference for the control group in male and female. CI and CI are the confidence interval of OR1 and OR2 in each gender group. P value < 0.05.