| Literature DB >> 34851140 |
Allyson G Costa1,2,3,4, Brenda K S Carvalho1,2, Mariana Araújo-Pereira5,6,7, Hiochelson N S Ibiapina1,2, Renata Spener-Gomes1,2, Alexandra B Souza1,2, Adriano Gomes-Silva8, Alice M S Andrade5,7, Elisangela C Silva9,10,11, María B Arriaga5,6,7, Aline Benjamin8, Michael S Rocha7,12, Adriana S R Moreira9, Jamile G Oliveira13, Marina C Figueiredo14, Megan M Turner14, Betina Durovni8,13, Solange Cavalcante8,13, Afranio L Kritski9, Valeria C Rolla8, Timothy R Sterling14, Bruno B Andrade5,6,7, Marcelo Cordeiro-Santos1,2,15.
Abstract
The interferon gamma release assay (IGRA) has emerged as a useful tool for identifying latent tuberculosis infection (LTBI). This assay can be performed through testing platforms such as the QuantiFERON-TB Gold Plus (QFT-Plus) assay. This in vitro test has been incorporated into several guidelines worldwide and has recently been considered by the World Health Organization (WHO) for the diagnosis of LTBI. The possibility of systematically implementing IGRAs such as the QFT-Plus assay in centers that perform LTBI screening has been accelerated by the decreased availability of the tuberculin skin test (TST) in several countries. Nevertheless, the process to implement IGRA testing in routine clinical care has many gaps. The study utilized the expertise acquired by the laboratory teams of the Regional Prospective Observational Research in Tuberculosis (RePORT)-Brazil consortium during study protocol implementation of LTBI screening of tuberculosis (TB) close contacts. RePORT-Brazil includes clinical research sites from Brazilian cities and is the largest multicenter cohort of TB close contacts in the country to date. Operational and logistical challenges faced during IGRA implementation in all study laboratories are described, as well as the solutions that were developed and led to the successful establishment of IGRA testing in RePORT-Brazil. The descriptions of the problems identified and resolved in this study can assist laboratories implementing IGRAs, in addition to manufacturers of IGRAs providing effective technical support. This will facilitate the implementation of IGRA testing in countries with large TB burdens, such as Brazil. IMPORTANCE The IGRA has emerged as a useful tool for identifying persons with LTBI. Although the implementation of IGRAs is of utmost importance, to our knowledge there is scarce information on the identification of logistical and technical challenges for systematic screening for LTBI on a large scale. Thus, the descriptions of the problems identified and resolved in this study can assist laboratories implementing IGRAs, in addition to manufacturers of IGRAs providing effective technical support. This will facilitate the implementation of IGRA testing in countries with large TB burdens, such as Brazil.Entities:
Keywords: IGRA; LTBI; QuantiFERON-Plus; quality control; screening; tuberculosis
Mesh:
Year: 2021 PMID: 34851140 PMCID: PMC8635161 DOI: 10.1128/Spectrum.01163-21
Source DB: PubMed Journal: Microbiol Spectr ISSN: 2165-0497
FIG 1Description of IGRA/QFT-Plus implementation in the study. The first step was to check whether all equipment and reagents were available and in good condition. Then, the team was trained to perform the test following GCLP and according to the manufacturer’s recommendations.
FIG 2Two different conditions for IGRA/QFT-Plus sample collection and processing in the study. (A) Setup A, utilized by sites 1 and 2 and characterized by performing the collection and processing of samples in the same place, without a vehicle. (B) Setup B, utilized by sites 3, 4, and 5 and characterized by performing the collection and processing of samples in different places, with transportation of the samples by vehicle.
FIG 3Frequencies of IGRA/QFT-Plus results in each setup and site, stratified by year of the study. The sites are grouped as setup A (sites 1 and 2) and setup B (sites 3, 4, and 5).
FIG 4Frequencies of conformities and nonconformities of samples in each setup and site, stratified by year of the study. The sites are grouped as setup A (sites 1 and 2) and setup B (sites 3, 4, and 5).
FIG 5Number of occurrences of the nonconformity temperature deviation in each setup and site, stratified by quarter (Q) and year of the study. The sites are grouped as setup A (sites 1 and 2) and setup B (sites 3, 4, and 5). The color of the circles indicates the year of nonconformity recorded, and the size is proportional to the number of occurrences.
Time and temperature quality control measurements by year in the study period
| Parameter and year | Setup A | Setup B |
|
|---|---|---|---|
| Time between sending and receiving (median [IQR]) (min) | |||
| 2016 | 55.8 (20.1–75.1) | 140.0 (102.0–176.0) | <0.001 |
| 2017 | 58.7 (22.2–82.8) | 121.0 (83.5–155.0) | <0.001 |
| 2018 | 61.8 (25.1–90.1) | 89.0 (29.0–164.0) | <0.001 |
| 2019 | 49.5 (20.1–66.1) | 135.0 (96.0–171.0) | <0.001 |
| Temp for sending samples (median [IQR]) (°C) | |||
| 2016 | 19.6 (18.1–21.2) | 17.8 (16.0–19.1) | <0.001 |
| 2017 | 21.9 (19.6–24.1) | 18.0 (16.0–19.5) | <0.001 |
| 2018 | 21.5 (19.3–23.8) | 18.3 (16.8–19.8) | <0.001 |
| 2019 | 20.6 (19.0–22.2) | 18.1 (16.6–19.2) | <0.001 |
| Temp for receiving samples (median [IQR]) (°C) | |||
| 2016 | 20.1 (18.8–21.4) | 19.6 (17.9–21.6) | <0.001 |
| 2017 | 22.1 (20.6–24.1) | 20.7 (19.5–22.9) | <0.001 |
| 2018 | 21.9 (20.0–23.9) | 20.4 (18.6–22.9) | <0.001 |
| 2019 | 20.7 (19.5–22.1) | 20.5 (18.9–22.6) | <0.001 |
| Temp variation (receiving vs sending) (median [IQR]) (°C) | |||
| 2016 | 0.54 (0.0–0.8) | 1.82 (0.0–3.7) | <0.001 |
| 2017 | 0.26 (0.0–0.1) | 2.72 (1.2–4.1) | <0.001 |
| 2018 | 0.37 (0.0–0.4) | 2.06 (0.9–4.1) | <0.001 |
| 2019 | 0.15 (0.0–0.2) | 2.35 (1.1–4.3) | <0.001 |
Setup A contains sites 1 and 2 and is characterized by performing the collection and processing of samples in the same place. Setup B contains sites 3, 4, and 5 and is characterized by performing the collection and processing of samples in different places. The numbers of samples for each setup changed over time, as follows: 2016: setup A, 190 samples; setup B, 173 samples; 2017: setup A, 366 samples; setup B, 258 samples; 2018: setup A, 505 samples; setup B, 471 samples; 2019: setup A, 570 samples; setup B, 333 samples.
Data were compared between the setups using the Mann-Whitney U test. All P values indicate statistical significance.
FIG 6Dynamics of the temperature at the time of shipment and receipt of study samples and the temperature variation over time in each setup, stratified by quarter (Q) and year during the study period. (A) Average temperature of sending samples calculated by quarter and year in each setup. (B) Average temperature of receiving samples calculated by quarter and year in each setup. (C) The difference between receiving and sending temperatures (Δ) was calculated for each quarter and year in each setup. Purple lines indicate setup A, and green lines indicate setup B. The light green blocks indicate the limit accepted by the IGRA test manufacturer as acceptable for the storage and handling of the samples (17°C to 27°C).
FIG 7Correlation between the variation of receiving versus sending time and sample temperature. (A) Dynamics of the presence of nonconformity in the sample receiving temperature versus the time variation (variation of receiving versus sending). Nonconformity was defined when the receiving temperature was <17°C or >27°C. (B) Correlation between temperature variation and time variation.