Literature DB >> 34847370

Characterization of gut microbial structural variations as determinants of human bile acid metabolism.

Daoming Wang1, Marwah Doestzada1, Lianmin Chen1, Sergio Andreu-Sánchez1, Inge C L van den Munckhof2, Hannah E Augustijn1, Martijn Koehorst3, Angel J Ruiz-Moreno1, Vincent W Bloks4, Niels P Riksen2, Joost H W Rutten2, Leo A B Joosten5, Mihai G Netea6, Cisca Wijmenga7, Alexandra Zhernakova7, Folkert Kuipers3, Jingyuan Fu8.   

Abstract

Bile acids (BAs) facilitate intestinal fat absorption and act as important signaling molecules in host-gut microbiota crosstalk. BA-metabolizing pathways in the microbial community have been identified, but it remains largely unknown how the highly variable genomes of gut bacteria interact with host BA metabolism. We characterized 8,282 structural variants (SVs) of 55 bacterial species in the gut microbiomes of 1,437 individuals from two cohorts and performed a systematic association study with 39 plasma BA parameters. Both variations in SV-based continuous genetic makeup and discrete clusters showed correlations with BA metabolism. Metagenome-wide association analysis identified 809 replicable associations between bacterial SVs and BAs and SV regulators that mediate the effects of lifestyle factors on BA metabolism. This is the largest microbial genetic association analysis to demonstrate the impact of bacterial SVs on human BA composition, and it highlights the potential of targeting gut microbiota to regulate BA metabolism through lifestyle intervention.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  bacterial genetics; bile acid metabolism; human gut microbiome; metagenome; population-based cohort study; structural variation

Mesh:

Substances:

Year:  2021        PMID: 34847370     DOI: 10.1016/j.chom.2021.11.003

Source DB:  PubMed          Journal:  Cell Host Microbe        ISSN: 1931-3128            Impact factor:   21.023


  8 in total

Review 1.  Moving beyond descriptive studies: harnessing metabolomics to elucidate the molecular mechanisms underpinning host-microbiome phenotypes.

Authors:  Stephanie L Bishop; Marija Drikic; Soren Wacker; Yuan Yao Chen; Anita L Kozyrskyj; Ian A Lewis
Journal:  Mucosal Immunol       Date:  2022-08-15       Impact factor: 8.701

2.  Influence of the microbiome, diet and genetics on inter-individual variation in the human plasma metabolome.

Authors:  Lianmin Chen; Daria V Zhernakova; Alexander Kurilshikov; Sergio Andreu-Sánchez; Daoming Wang; Hannah E Augustijn; Arnau Vich Vila; Rinse K Weersma; Marnix H Medema; Mihai G Netea; Folkert Kuipers; Cisca Wijmenga; Alexandra Zhernakova; Jingyuan Fu
Journal:  Nat Med       Date:  2022-10-10       Impact factor: 87.241

3.  Genome-centric investigation of bile acid metabolizing microbiota of dairy cows and associated diet-induced functional implications.

Authors:  Limei Lin; Zheng Lai; Huisheng Yang; Jiyou Zhang; Weibiao Qi; Fei Xie; Shengyong Mao
Journal:  ISME J       Date:  2022-10-19       Impact factor: 11.217

4.  Short- and long-read metagenomics expand individualized structural variations in gut microbiomes.

Authors:  Liang Chen; Na Zhao; Jiabao Cao; Xiaolin Liu; Jiayue Xu; Yue Ma; Ying Yu; Xuan Zhang; Wenhui Zhang; Xiangyu Guan; Xiaotong Yu; Zhipeng Liu; Yanqun Fan; Yang Wang; Fan Liang; Depeng Wang; Linhua Zhao; Moshi Song; Jun Wang
Journal:  Nat Commun       Date:  2022-06-08       Impact factor: 17.694

Review 5.  Metabolic Messengers: bile acids.

Authors:  Alessia Perino; Kristina Schoonjans
Journal:  Nat Metab       Date:  2022-03-25

Review 6.  Crosstalk between adipose tissue and the microbiota-gut-brain axis in metabolic diseases.

Authors:  Ziwei Yu; Yuting Wang; Zhi Yu; Mengjiang Lu; Bin Xu
Journal:  Int J Biol Sci       Date:  2022-02-07       Impact factor: 6.580

Review 7.  Combination of Whole Genome Sequencing and Metagenomics for Microbiological Diagnostics.

Authors:  Srinithi Purushothaman; Marco Meola; Adrian Egli
Journal:  Int J Mol Sci       Date:  2022-08-30       Impact factor: 6.208

Review 8.  Research Progress on the Therapeutic Effect of Polysaccharides on Non-Alcoholic Fatty Liver Disease through the Regulation of the Gut-Liver Axis.

Authors:  Xiang Chen; Menghan Liu; Jun Tang; Ning Wang; Yibin Feng; Haotian Ma
Journal:  Int J Mol Sci       Date:  2022-10-03       Impact factor: 6.208

  8 in total

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