| Literature DB >> 34828408 |
Tarin Tanji1, Emily Cohen1, Darrick Shen1, Chi Zhang1, Fei Yu1, Anne L Coleman1, Jie J Zheng1.
Abstract
Glaucoma is the leading cause of irreversible blindness worldwide, with elevated intraocular pressure (IOP) as the only known modifiable risk factor. Trabecular meshwork (TM)-inducible myocilin (the MYOC gene) was the first to be identified and linked to juvenile and primary open-angle glaucoma. It has been suggested that mutations in the MYOC gene and the aggregation of mutant myocilin in the endoplasmic reticulum (ER) of TM may cause ER stress, resulting in a reduced outflow of aqueous humor and an increase in IOP. We selected 20 MYOC mutations with experimentally determined melting temperatures of mutated myocilin proteins. We included 40 published studies with at least one glaucoma patient with one of these 20 MYOC mutations and information on age at glaucoma diagnosis. Based on data from 458 patients, we found that a statistically significant but weak correlation was present between age and melting temperature based on various assumptions for age. We therefore conclude that genetic analysis of MYOC mutations alone cannot be used to accurately predict age at glaucoma diagnosis. However, it might be an important prognostic factor combined with other clinical factors for critical and early detection of glaucoma.Entities:
Keywords: endoplasmic reticulum stress; intraocular pressure; myocilin; trabecular meshwork
Mesh:
Substances:
Year: 2021 PMID: 34828408 PMCID: PMC8623052 DOI: 10.3390/genes12111802
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.141
Number of Patients (known and unknown individual age).
| MYOC | MT * | N (Known + Unknown) ** | Frequency (%) |
|---|---|---|---|
| K423E [ | 34.2 | 13 (13 + 0) | 2.84 |
| I477N [ | 37.7 | 66 (16 + 50) | 14.41 |
| I477S [ | 39.7 | 20 (0 + 20) | 4.37 |
| Y427H [ | 40.3 | 35 (1 + 34) | 7.64 |
| C433R [ | 40.4 | 20 (13 + 7) | 4.37 |
| R272G [ | 41 | 5 (1 + 4) | 1.09 |
| S502P [ | 41 | 8 (8 + 0) | 1.75 |
| V426F [ | 41.5 | 17 (5 + 12) | 3.71 |
| N480K [ | 42.4 | 47 (47 + 0) | 10.26 |
| G246R [ | 42.5 | 7 (7 + 0) | 1.53 |
| G367R [ | 42.7 | 30 (30 + 0) | 6.55 |
| I499F [ | 42.8 | 7 (7 + 0) | 1.53 |
| G252R [ | 43 | 23 (23 + 0) | 5.02 |
| E323K [ | 44 | 12 (1 + 11) | 2.62 |
| T377M [ | 44.3 | 100 (85 + 15) | 21.83 |
| G364V [ | 45 | 22 (0 + 22) | 4.80 |
| P481L [ | 45.5 | 1 (1 + 0) | 0.22 |
| D380A [ | 46.6 | 19 (19 + 0) | 4.15 |
| A427T [ | 48.3 | 2 (2 + 0) | 0.44 |
| K398R [ | 53.8 | 4 (4 + 0) | 0.87 |
* MT: Melting Temperature. ** N (Known + Unknown): Number of patients (number of patients with known individual on set age + number of patients with unknown individual on set age). Total numbers 458 (283 + 175).
Figure 1Cartoon structure of the OLF domain of myocilin. The amino acids with known mutations used for statistical analysis are shown as green balls.
Figure 2Plot of age at diagnosis versus the respective myocilin melting temperatures. Known individuals are blue; unknown individual ages at diagnosis are red. Pearson correlation coefficient between age of diagnosis and melting temperature is 0.37626. Linear regression of age of diagnosis (Age) on melting temperature (MT) is: Age = −38.05 + 1.65 × MT (p < 0.0001); R-squared = 0.142; n = 458.
Figure 3Age at diagnosis vs melting temperature, using randomly generated data points according to literature with summary statistics. Age for those with known individual ages (blue) and those with unknown individual ages (red) whose ages were imputed by a value randomly drawn from a Gaussian distribution with known mean age and standard deviation, SD, (SD was calculated as [maximum age–minimum age]/4 if SD was not given) and truncated by the given range. Pearson correlation coefficient between age of diagnosis and melting temperature is 0.34489. Linear regression of age of diagnosis (Age) on melting temperature (MT) is Age = −34.82 + 1.58 × MT (p < 0.0001); R-squared = 0.119; n = 458.