| Literature DB >> 34813588 |
Aparna Krishnavajhala1, Brittany A Armstrong1, Alexander R Kneubehl1, Sarah M Gunter1, Julie Piccione2, Hee J Kim3, Rosa Ramirez4, Ivan Castro-Arellano4, Walter Roachell5, Pete D Teel3, Job E Lopez1.
Abstract
Borrelia turicatae is a causative agent of tick-borne relapsing fever (TBRF) in the subtropics and tropics of the United States and Latin America. Historically, B. turicatae was thought to be maintained in enzootic cycles in rural areas. However, there is growing evidence that suggests the pathogen has established endemic foci in densely populated regions of Texas. With the growth of homelessness in the state and human activity in city parks, it was important to implement field collection efforts to identify areas where B. turicatae and its vector circulate. Between 2017 and 2020 we collected Ornithodoros turicata ticks in suburban and urban areas including public and private parks and recreational spaces. Ticks were fed on naïve mice and spirochetes were isolated from the blood. Multilocus sequence typing (MLST) was performed on eight newly obtained isolates and included previously reported sequences. The four chromosomal loci targeted for MLST were 16S ribosomal RNA (rrs), flagellin B (flaB), DNA gyrase B (gyrB), and the intergenic spacer (IGS). Given the complexity of Borrelia genomes, plasmid diversity was also evaluated. These studies indicate that the IGS locus segregates B. turicatae into four genomic types and plasmid diversity is extensive between isolates. Furthermore, B. turicatae and its vector have established endemic foci in parks and recreational areas in densely populated settings of Texas.Entities:
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Year: 2021 PMID: 34813588 PMCID: PMC8651100 DOI: 10.1371/journal.pntd.0009868
Source DB: PubMed Journal: PLoS Negl Trop Dis ISSN: 1935-2727
Designations of Borrelia turicatae isolates used in this study and their biological sources, time of collection, and origin.
| Isolate Designation & Origin | Host | Isolation Date (Month/Year) | Locality |
|---|---|---|---|
| LCC1, Cave | 12/2017 | Bexar Co., San Antonio, TX | |
| MCC1, Cave | 12/2017 | Bexar Co., San Antonio, TX | |
| WOC1, Cave | 12/2017 | Bexar Co., San Antonio, TX | |
| LOC1, Cave | 6/2017 | Travis Co., Austin, TX | |
| LOC3, Cave | 8/2018 | Travis Co., Austin, TX | |
| BUC1, Cave | 8/2018 | Travis Co., Austin, TX | |
| BRP1 | 7/2017 | Travis Co., Austin, TX | |
| BRP1a | 11/2017 | Travis Co., Austin, TX | |
| BRP2 | 11/2017 | Travis Co., Austin, TX | |
| LAFB1, Den | 2019 | Bexar Co., San Antonio, TX | |
| 91E135 | 1991 | Crockett Co., Ozona, TX | |
| TCB-1 | Domestic Dog | 1999 | Clay Co., TX |
| TCB-2 | Domestic Dog | 2001 | Lubbock Co., TX |
| FCB† | Domestic Dog | 1992 | Sumter Co., FL |
| CSB, Canine blood | Domestic Dog | 3/2020 | Brazos Co., College Station, TX |
| BTE5EL | Human Isolate | 2015 | Martin Co., TX |
*Reported by Bissett et al. [2]
†Reported by Schwan et al. [12]
‡ Reported by Christensen et al. [13]
Oligonucleotides used for PCR and MLST of relapsing fever spirochetes, Texas, USA*.
| Primer | Gene Locus | Sequence (5’-3’) |
|---|---|---|
|
|
| |
| UniB | TACAAGGAGGTGATCCAGC | |
| FD3 | AGAGTTTGATCCTGGCTTAG | |
| 16S (+) | TACAGGTGCTGCATGGTTGTCG | |
| 16S (-) | TAGAAGTTCGCCTTCGCCTCTG | |
| Rec4 | ATGCTAGAAACTGCATGA | |
| P10 REV | ACATAAGGGCCATGATGATT | |
| P6 REV | TTTACAGCGTAGACTACCAG | |
|
|
| |
| flaB-Exp-For | ATGATCATAAATCATAATACGTCAGCTATAAATG | |
| flaB-Exp-Rev | TCTAAGCAATGATAATACATACTGAGGCAC | |
| flaLL | ACATATTCAGATGCAGACAGAGGT | |
| flaRL | GCAATCATAGCCATTGCAGATTGT | |
|
|
| |
| gyrB 3’ | GGCTCTTGAAACAATAACAGACATCGC | |
| gyrB 5’+3 | GCTGATGCTGATGTTGATGG | |
|
|
| |
| IGSF | GTATGTTTAGTGAGGGGGGTG | |
| IGSR | GGATCATAGCTCAGGTGGTTAG |
*For, forward; Rev, reverse.
† Reported by Wang et al [28]
‡ Reported by Porcella et al [29]
§ Reported by Barbour et al [30]
¥ Reported by Bunikis et al [31]
Fig 1Locality map of Borrelia turicatae sequences and isolates used in the study.
Sequences originated from newly acquired isolates (squares), previously published isolates (triangles), and sequences obtained from GenBank (circles). The red triangle in the map denotes three collection sites within a 50-meter proximity and blue square indicates two collections from the same location at two different time points. The city limits of San Antonio and Austin, Texas are shown as green and grey, respectively. Scales are shown in the bottom left of the figure and insert. Below are links to the shapefiles used: State outline: https://www.arcgis.com/home/item.html?id=9a43e9a3e2df4a159a57bcef5de96018. Austin city limits: https://regional-open-data-capcog.opendata.arcgis.com. San Antonio city limits: https://geoportal-mpo.opendata.arcgis.com.
Fig 2Phylogram of the intergenic spacer sequences from Borrelia turicatae.
Sequences were obtained from infected canines (*), a human (•), and all others B. turicatae IGS sequences originated from infected ticks. The phylogenetic tree was generated with 1,000 bootstrap replicates. The scale bar for branch lengths represents the number of nucleotide substitutions per site (0.0020).
Fig 3Plasmid profiles of 16 Borrelia turicatae isolates from Texas and Florida.
Shown are previously reported and new isolates of Borrelia turicatae. The isolate designations are shown on top and are organized by genotype. Molecular size standards (MSS) in kilobases are shown on the left. CP: circular plasmid; CH: chromosome; MP: megaplasmid.