Literature DB >> 34808239

Noninvasive Tape-Stripping with High-Resolution RNA Profiling Effectively Captures a Preinflammatory State in Nonlesional Psoriatic Skin.

Lam C Tsoi1, Xianying Xing2, Enze Xing2, Rachael Wasikowski2, Shuai Shao3, Chang Zeng2, Olesya Plazyo2, Joseph Kirma2, Yanyung Jiang2, Allison C Billi2, Mrinal K Sarkar2, Jessica L Turnier4, Ranjitha Uppala2, Kathleen M Smith5, Yolanda Helfrich2, John J Voorhees2, Emanual Maverakis6, Robert L Modlin7, J Michelle Kahlenberg8, Victoria E Scott9, Johann E Gudjonsson10.   

Abstract

Tape stripping is a minimally invasive, nonscarring method that can be utilized to assess gene expression in the skin but is infrequently used given technical constraints. By comparing different tape stripping technologies and full-thickness skin biopsy results of lesional and nonlesional psoriatic skin from the same patients, we demonstrate that tape stripping with optimized high-resolution transcriptomic profiling can be used to effectively assess and characterize inflammatory responses in the skin. Upon comparison with single-cell RNA-sequencing data from psoriatic full-thickness skin biopsies, we illustrate that tape-stripping efficiently captures the transcriptome of the upper layers of the epidermis with sufficient resolution to assess the molecular components of the feed-forward immune amplification pathway in psoriasis. Notably, nonlesional psoriatic skin sampled by tape stripping demonstrates activated, proinflammatory changes when compared to healthy control skin, suggesting a prepsoriatic state, which is not captured on full-thickness skin biopsy transcriptome profiling. This work illustrates an approach to assess inflammatory response in the epidermis by combining noninvasive sampling with high throughput RNA-sequencing, providing a foundation for biomarker discoveries and mechanism of action studies for inflammatory skin conditions.
Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2021        PMID: 34808239      PMCID: PMC9117571          DOI: 10.1016/j.jid.2021.09.038

Source DB:  PubMed          Journal:  J Invest Dermatol        ISSN: 0022-202X            Impact factor:   7.590


  21 in total

1.  Use of RT-PCR and DNA microarrays to characterize RNA recovered by non-invasive tape harvesting of normal and inflamed skin.

Authors:  Rita Wong; Vynga Tran; Vera Morhenn; She-Pin Hung; Bogi Andersen; Elaine Ito; G Wesley Hatfield; Nicholas R Benson
Journal:  J Invest Dermatol       Date:  2004-07       Impact factor: 8.551

2.  Risankizumab versus Ustekinumab for Moderate-to-Severe Plaque Psoriasis.

Authors:  Kim A Papp; Andrew Blauvelt; Michael Bukhalo; Melinda Gooderham; James G Krueger; Jean-Philippe Lacour; Alan Menter; Sandra Philipp; Howard Sofen; Stephen Tyring; Beate R Berner; Sudha Visvanathan; Chandrasena Pamulapati; Nathan Bennett; Mary Flack; Paul Scholl; Steven J Padula
Journal:  N Engl J Med       Date:  2017-04-20       Impact factor: 91.245

3.  Novel p19 protein engages IL-12p40 to form a cytokine, IL-23, with biological activities similar as well as distinct from IL-12.

Authors:  B Oppmann; R Lesley; B Blom; J C Timans; Y Xu; B Hunte; F Vega; N Yu; J Wang; K Singh; F Zonin; E Vaisberg; T Churakova; M Liu; D Gorman; J Wagner; S Zurawski; Y Liu; J S Abrams; K W Moore; D Rennick; R de Waal-Malefyt; C Hannum; J F Bazan; R A Kastelein
Journal:  Immunity       Date:  2000-11       Impact factor: 31.745

4.  Association analyses identify six new psoriasis susceptibility loci in the Chinese population.

Authors:  Liang-Dan Sun; Hui Cheng; Zai-Xing Wang; An-Ping Zhang; Pei-Guang Wang; Jin-Hua Xu; Qi-Xing Zhu; Hai-Sheng Zhou; Eva Ellinghaus; Fu-Ren Zhang; Xiong-Ming Pu; Xue-Qin Yang; Jian-Zhong Zhang; Ai-E Xu; Ri-Na Wu; Li-Min Xu; Lin Peng; Cynthia A Helms; Yun-Qing Ren; Chi Zhang; Shu-Mei Zhang; Rajan P Nair; Hong-Yan Wang; Guo-Shu Lin; Philip E Stuart; Xing Fan; Gang Chen; Trilokraj Tejasvi; Pan Li; Jun Zhu; Zhi-Ming Li; Hong-Mei Ge; Michael Weichenthal; Wen-Zheng Ye; Cheng Zhang; Song-Ke Shen; Bao-Qi Yang; Yuan-Yuan Sun; Shan-Shan Li; Yan Lin; Jian-Hua Jiang; Cun-Tao Li; Ri-Xin Chen; Juan Cheng; Xin Jiang; Peng Zhang; Wei-Min Song; Jin Tang; Hao-Qin Zhang; Li Sun; Jing Cui; Li-Jun Zhang; Biao Tang; Fei Huang; Qian Qin; Xiao-Ping Pei; Ai-Min Zhou; Li-Mei Shao; Jian-Lan Liu; Feng-Yu Zhang; Wei-Dong Du; Andre Franke; Anne M Bowcock; James T Elder; Jian-Jun Liu; Sen Yang; Xue-Jun Zhang
Journal:  Nat Genet       Date:  2010-10-17       Impact factor: 38.330

5.  Immunohistochemical studies of infiltrating cells in early and chronic lesions of psoriasis.

Authors:  S Onuma
Journal:  J Dermatol       Date:  1994-04       Impact factor: 4.005

6.  Transcriptome analysis of psoriasis in a large case-control sample: RNA-seq provides insights into disease mechanisms.

Authors:  Bingshan Li; Lam C Tsoi; William R Swindell; Johann E Gudjonsson; Trilokraj Tejasvi; Andrew Johnston; Jun Ding; Philip E Stuart; Xianying Xing; James J Kochkodan; John J Voorhees; Hyun M Kang; Rajan P Nair; Goncalo R Abecasis; James T Elder
Journal:  J Invest Dermatol       Date:  2014-01-17       Impact factor: 8.551

7.  Epigenetic control of IL-23 expression in keratinocytes is important for chronic skin inflammation.

Authors:  Hui Li; Qi Yao; Alberto Garcia Mariscal; Xudong Wu; Justus Hülse; Esben Pedersen; Kristian Helin; Ari Waisman; Caroline Vinkel; Simon Francis Thomsen; Alexandra Avgustinova; Salvador Aznar Benitah; Paola Lovato; Hanne Norsgaard; Mette Sidsel Mortensen; Lone Veng; Björn Rozell; Cord Brakebusch
Journal:  Nat Commun       Date:  2018-04-12       Impact factor: 14.919

8.  Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways.

Authors:  Rajan P Nair; Kristina Callis Duffin; Cynthia Helms; Jun Ding; Philip E Stuart; David Goldgar; Johann E Gudjonsson; Yun Li; Trilokraj Tejasvi; Bing-Jian Feng; Andreas Ruether; Stefan Schreiber; Michael Weichenthal; Dafna Gladman; Proton Rahman; Steven J Schrodi; Sampath Prahalad; Stephen L Guthery; Judith Fischer; Wilson Liao; Pui-Yan Kwok; Alan Menter; G Mark Lathrop; Carol A Wise; Ann B Begovich; John J Voorhees; James T Elder; Gerald G Krueger; Anne M Bowcock; Gonçalo R Abecasis
Journal:  Nat Genet       Date:  2009-01-25       Impact factor: 38.330

9.  Skin tape sampling technique identifies proinflammatory cytokines in atopic dermatitis skin.

Authors:  Taras Lyubchenko; Hannah K Collins; Elena Goleva; Donald Y M Leung
Journal:  Ann Allergy Asthma Immunol       Date:  2020-09-05       Impact factor: 6.347

10.  Amelioration of epidermal hyperplasia by TNF inhibition is associated with reduced Th17 responses.

Authors:  Lisa C Zaba; Irma Cardinale; Patricia Gilleaudeau; Mary Sullivan-Whalen; Mayte Suárez-Fariñas; Mayte Suárez Fariñas; Judilyn Fuentes-Duculan; Inna Novitskaya; Artemis Khatcherian; Mark J Bluth; Michelle A Lowes; James G Krueger
Journal:  J Exp Med       Date:  2007-11-26       Impact factor: 14.307

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