Literature DB >> 34807727

Diversity and function of microbial communities in the sand sheath of Agropyron cristatum by metagenomic analysis.

Yuehua Wang1, Meixiao Wu1, Yijing Wang1, Xuefei Wang2, Ming Yu2, Guixia Liu1, Hui Tang1.   

Abstract

The roots of most gramineous plants are surrounded by a variety of microorganisms; however, few studies have focused on the rhizosheath of psammophytes. Therefore, in this study, we used Illumina HiSeq high-throughput sequencing technology to analyse the composition and functional diversity of microbial communities in the rhizosheath of sand-grown Agropyron cristatum (L.) Gaertn. We found that the number of species and functions of microbial communities gradually decreased from the rhizosheath to the bulk soil. Thus, the microbial composition of the rhizosheath was richer and more diverse, and the abundance of bacteria, including Sphingosinicella, Rhizorhabdus, Friedmanniella, Geodermatophilus, Blastococcus, and Oscillatoria, was higher, and the abundance of fungi, such as Mycothermus, was higher. The abundance of CO2 fixation-related genes (acsA, Pcc, and cbbL) in the carbon cycle; NO3-, NO2-, NH2OH, and N2 transformation genes (nrtP, nirS, hao, and nifK) in the nitrogen cycle; soxB/A/C, Sat, and dsrB genes in the sulphur cycle; and 1-phosphate mannitol dehydrogenase (MtlD) gene and polyketide synthase gene (pks) were higher in the rhizosheath than in the bulk soil, as well as genes related to phosphorus uptake in the phosphorus cycle. Our findings showed that the rhizosheath may host the predominant microbial species related to the formation of a rhizosheath.

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Keywords:  Agropyron cristatum; Illumina sequencing; community structure; diversité fonctionnelle; functional diversity; rhizogaine; rhizosheath; structure de la communauté; séquençage Illumina

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Year:  2021        PMID: 34807727     DOI: 10.1139/cjm-2021-0129

Source DB:  PubMed          Journal:  Can J Microbiol        ISSN: 0008-4166            Impact factor:   2.419


  1 in total

1.  Baas Becking meets One Health.

Authors:  Willem van Schaik
Journal:  Nat Microbiol       Date:  2022-04       Impact factor: 17.745

  1 in total

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