| Literature DB >> 34806886 |
Gerard Comas-Vilà1, Pedro Salvador1.
Abstract
The prediction of isomer shifts in 57Fe Mossbauer spectra is typically achieved by building calibration lines using the values of the density at the nuclear position. Using Slater-type orbital basis or large and specific Gaussian-type orbital basis has been thus far mandatory to achieve accurate predictions with density functional theory methods. In this work, we show that replacing the value of the density at the nucleus by the density integrated in a sphere of radius 0.06 au centered on the Fe nuclei yields excellent calibration lines (r2 = 0.976) with a high predictive power (q2 = 0.975, MAE = 0.055 mm·s-1) while using the conventional def2-TZVP basis set and X-ray geometrical parameters. Our data set comprises 69 57Fe-containing compounds and 103 signals. We also find B3LYP performing significantly better than the PW91 functional.Entities:
Year: 2021 PMID: 34806886 PMCID: PMC8675134 DOI: 10.1021/acs.jctc.1c00722
Source DB: PubMed Journal: J Chem Theory Comput ISSN: 1549-9618 Impact factor: 6.006
Calculated and Experimental IS’s (in mm/s) for (μ-oxo) and (μ-hydroxo) Di-iron Systems 1–17 and Some Mono-iron Complexes 18–25 Using ⟨ρ⟩0.06 Values at B3LYP/def2-TZVP Level of Theorya,b
| experimental | calculated | ||||||
|---|---|---|---|---|---|---|---|
| complex | OS | δ4.2K | ρ(0) | ⟨ρ⟩0.06 | δ | code | |
| (1) Fe2(salmp)22– | 0 | +2 | 1.11 | 11580.197 | 1.346847 | 1.13 | KASFUF |
| +2 | 1.11 | 11580.237 | 1.346853 | 1.12 | |||
| (1a) Fe2(salmp)22– | 4 | +2 | 1.11 | 11580.194 | 1.346847 | 1.13 | KASFUF |
| +2 | 1.11 | 11580.234 | 1.346853 | 1.12 | |||
| (2) Fe2(OH)(OAc)2(Me3TACN)2+ | 0 | +2 | 1.16 | 11580.006 | 1.346800 | 1.26 | DIBWUG10 |
| +2 | 1.16 | 11580.010 | 1.346801 | 1.26 | |||
| (3) Fe2(salmp)2– | 9/2 | +2.5 | 0.83 | 11580.963 | 1.346960 | 0.84 | KASGAM |
| +2.5 | 0.83 | 11580.950 | 1.346958 | 0.85 | |||
| (4) Cl3FeOFeCl32– | 0 | +3 | 0.36 | 11583.163 | 1.347164 | 0.31 | FACTEI |
| +3 | 0.36 | 11583.162 | 1.347164 | 0.31 | |||
| (5) Fe2O(OAc)2(Me3TACN)22+ | 0 | +3 | 0.47 | 11581.684 | 1.347037 | 0.64 | DIBXAN10 |
| +3 | 0.47 | 11581.678 | 1.347036 | 0.65 | |||
| (6) Fe2O(OAc)2(bipy)2Cl2 | 0 | +3 | 0.41 | 11582.077 | 1.347090 | 0.51 | VABMUG |
| +3 | 0.41 | 11582.091 | 1.347090 | 0.50 | |||
| (7) Fe2(salmp)2 | 0 | +3 | 0.56 | 11581.633 | 1.347060 | 0.58 | KASFOZ |
| +3 | 0.56 | 11581.635 | 1.347060 | 0.58 | |||
| (8) Fe2(cat)4(H2O)22– | 0 | +3 | 0.56 | 11581.811 | 1.347057 | 0.59 | TEMKUR |
| +3 | 0.56 | 11581.813 | 1.347057 | 0.59 | |||
| (9) Fe2(O)2(6-Me3-TPA)22+ | 0 | +3 | 0.50 | 11581.973 | 1.347086 | 0.52 | YOCKAC |
| +3 | 0.50 | 11581.973 | 1.347086 | 0.52 | |||
| (10) (Fe(Me3TACN)(TTC))2O | 0 | +3 | 0.46 | 11582.123 | 1.347100 | 0.48 | YOHMOX |
| +3 | 0.46 | 11582.123 | 1.347100 | 0.48 | |||
| (11) Fe2O2(5-Et3-TPA)23+ | 9/2 | +3.5 | 0.14 | 11582.786 | 1.347227 | 0.15 | DEKNOW |
| +3.5 | 0.14 | 11582.786 | 1.347227 | 0.15 | |||
| (12) (Fe(TAML)2)2O2– | 0 | +4 | –0.07 | 11583.843 | 1.347333 | –0.13 | KAJBIH |
| +4 | –0.07 | 11583.843 | 1.347333 | –0.13 | |||
| (13) Fe2(OH)(O2P(OPh)2)3(HBpz3)22+ | 1 | +3 | 0.44 | 11581.911 | 1.347108 | 0.46 | PIMTAG |
| +3 | 0.44 | 11581.896 | 1.347105 | 0.47 | |||
| (14) Fe2O(Piv)2(Me3TACN)22+ | 0 | +3 | 0.48 | 11582.036 | 1.347099 | 0.48 | ZOCPEM |
| +3 | 0.48 | 11582.058 | 1.347101 | 0.48 | |||
| (15) Fe2O(TMIP)2(OAc)22+ | 0 | +3 | 0.52 | 11582.000 | 1.347104 | 0.47 | JIGNUI |
| +3 | 0.52 | 11582.015 | 1.347108 | 0.46 | |||
| (16) Fe2O(HBpz3)2(OAc)2 | 0 | +3 | 0.52 | 11581.856 | 1.347084 | 0.52 | CACZIP10 |
| +3 | 0.52 | 11581.861 | 1.347086 | 0.51 | |||
| (17) Fe2OH(HBpz3)2(OAc)2 | 0 | +3 | 0.47 | 11581.871 | 1.347100 | 0.47 | COCJIN |
| +3 | 0.47 | 11581.828 | 1.347097 | 0.48 | |||
| (18) Fe(phen)2Cl2 | 2 | +2 | 1.05 | 11580.533 | 1.346874 | 1.06 | CPENFE01 |
| (19) Fe(opda)2Cl2 | 2 | +2 | 0.91 | 11580.424 | 1.346837 | 1.17 | FUJQOQ |
| (20) Fe(Py)4Cl2 | 2 | +2 | 1.16 | 11580.219 | 1.346824 | 1.20 | TPYFEC |
| (21) Fe(HB(mtdaR)3)2 | 0 | +2 | 0.49 | 11581.593 | 1.347070 | 0.56 | JOHCEP |
| (22) [(Me3cy-ac)FeN]2+ | 0 | +2 | –0.29 | 11584.129 | 1.347389 | –0.27 | ref ( |
| (23) FeCl(MBTHx)2 | 5/2 | +3 | 0.43 | 11582.669 | 1.347128 | 0.40 | CELVEU |
| (24) H2B(MesIm)2Fe(NMes)2 | 3/2 | +3 | –0.25 | 11584.484 | 1.347403 | –0.31 | ZACWUZ |
| (25) [H2B(MesIm)2Fe(NMes)2]+ | 0 | +4 | –0.48 | 11585.100 | 1.347486 | –0.53 | ZACXAG |
Electron densities in atomic units.
The ligands are encoded as follows: salmp = 2-bis(salicylideneamino)methylphenolate, opda = 1,2-phenylenediamine, Me3TACN = 1,4,7-trimethyl-1,4,7-triazacyclonane, HB(mtdaR)3 = tris(mercaptothiadiazolyl)borate, TPA = tris(2-pyridylmethyl)amine, cy-ac = anion of 1,4,8,11-tetraazacyclotetradecane-1-acetate, cat = catecholato-O,O,O′-bis(catecholato-O,O′), HBpz3 = hydrotis-1-(pyrazolyl)borate, Piv = pivalate, TTC = tetrachlorocatecholato-O,O′ dianion, TMIP = tris(methylimidazol-2-yl)phosphine, MBTHx = bis(N-methylbenzothiohydroxamato), H2B(MesIm)2 = dihydrobis[1-(2,4,6-trimethylphenyl)imidazole-2-ylidene]borato, and TAML = tetra-amido macrocyclic ligand.
Calculated and Experimental IS’s (in mm/s) for Simple Fe Ions 44–54, Fe–S Compounds 55–62, and Fe-Porphyrin systems 63–69 Using ⟨ρ⟩0.06 Values at B3LYP/def2-TZVP Level of Theorya,b
| experimental | calculated | ||||||
|---|---|---|---|---|---|---|---|
| Complex | OS | δ4.2K | ρ(0) | ⟨ρ⟩0.06 | δ | code | |
| (44) FeF64– | 2 | +2 | 1.48 | 11579.703 | 1.346767 | 1.34 | ICSD 26603 |
| (45) FeCl42– | 2 | +2 | 1.05 | 11581.197 | 1.346893 | 1.01 | DEBWEM |
| (46) FeBr42– | 2 | +2 | 1.12 | 11581.194 | 1.346881 | 1.05 | DEBWIQ |
| (47) Fe(NCS)42– | 2 | +2 | 0.97 | 11581.038 | 1.346928 | 0.92 | KEFFEG |
| (48) Fe(H2O)62+ | 2 | +2 | 1.39 | 11579.688 | 1.346772 | 1.33 | ICSD 16589 |
| (49) Fe(bipy)2Cl2+ | 5/2 | +3 | 0.54 | 11582.032 | 1.347082 | 0.52 | CAVDOS05 |
| (50) FeF63– | 5/2 | +3 | 0.61 | 11582.155 | 1.347126 | 0.41 | TUKBOQ |
| (51) FeCl63– | 5/2 | +3 | 0.56 | 11582.177 | 1.347069 | 0.56 | DALLIL |
| (52) FeCl4– | 5/2 | +3 | 0.36 | 11583.208 | 1.347158 | 0.33 | MICYFE10 |
| (53) FeO42– | 1 | +6 | –0.90 | 11587.208 | 1.347668 | –1.01 | ICSD 32756 |
| (54) FeCl5(H2O)2– | 5/2 | +3 | 0.49 | 11582.272 | 1.347090 | 0.50 | VOCBAQ |
| (55) Fe(DTSQ)22– | 2 | +2 | 0.67 | 11582.068 | 1.346977 | 0.80 | PTSQFE10 |
| (56) Fe(SPh)42– | 2 | +2 | 0.66 | 11581.983 | 1.346984 | 0.78 | PTHPFE10 |
| (57) [Fe2S2(S2- | 5 | +3 | 0.28 | 11583.315 | 1.347162 | 0.32 | XLDTSF |
| +3 | 0.28 | 11583.315 | 1.347162 | 0.32 | |||
| (58) [Fe2S2(OPh- | 5 | +3 | 0.37 | 11583.059 | 1.347159 | 0.32 | GIBCUP |
| +3 | 0.37 | 11583.058 | 1.347159 | 0.32 | |||
| (59) [Fe2S2(C4H4N)4]2– | 5 | +3 | 0.26 | 11582.859 | 1.347217 | 0.17 | CONSED10 |
| +3 | 0.26 | 11582.860 | 1.347217 | 0.17 | |||
| (60) Fe(SEt)4– | 5/2 | +3 | 0.25 | 11583.239 | 1.347139 | 0.37 | CANDAW10 |
| (61) Fe(PPh3)2(“S2”)2 | 1 | +4 | 0.16 | 11583.052 | 1.347211 | 0.19 | SOCVUB |
| (62) Fe(PPh3)(“ S2”)2 | 0 | +4 | 0.12 | 11583.183 | 1.347192 | 0.24 | SOCWAI |
| (63) Fe(OEP)CO | 0 | +2 | 0.27 | 11582.661 | 1.347158 | 0.33 | YEQPOA |
| (64) Fe(OEP) | 1 | +2 | 0.63 | 11581.467 | 1.346999 | 0.74 | DEDWUE |
| (65) Fe(OEC) | 1 | +2 | 0.62 | 11580.971 | 1.346973 | 0.81 | BUYKUB10 |
| (66) Fe(OEC)Cl | 3/2 | +3 | 0.22 | 11583.057 | 1.347222 | 0.16 | SUMWUS |
| (67) Fe(OEC)C6H5 | 3/2 | +3 | –0.08 | 11583.786 | 1.347310 | –0.07 | SUMXED |
| (68) FeCl(η4-MAC*)− | 5/2 | +3 | –0.04 | 11583.666 | 1.347301 | –0.04 | JESGUJ |
| (69) Fe(OEP)(4-NMe2Py)22+ | 1/2 | +3 | 0.26 | 11582.271 | 1.347170 | 0.30 | VOFLOR |
Electron densities in atomic units.
The ligands are encoded as follows: OEC = dianion of trans-7,8-dihydro-octaethylporphyrin, OEP = dianion of octaethylporphyrin, DTSQ = bis(dithiodithiosquarato,S,S′), η4-MAC* = 13,13-diethyl-2,2,5,5,7,7,10,10-octamethyl-1,4,8,11-tetra-azatetradecan-3,6,9,12,14-pentaone-N,N′,N″,N‴, “S2” = 1,2-benzenedithiolato-S,S′ dianion.
Figure 1Square of the correlation coefficient of the IS calibration vs the radius of the sphere around Fe. Values at R = 0 correspond to the calibration lines calculated using ρFe(0).
Figure 2IS calibration line for the B3LYP/def2-TZVP level of theory using all Fe complexes (103 Fe sites in total).
Figure 3Values of the Laplacian of the density along the Fe–Cl and Fe–O bonds for FeCl42– and FeO42– ions, respectively.
Figure 4Cross-validation results for the calibration line of Figure .
Calculated and Experimental IS’s (in mm/s) for Carboxylate Di-iron Complexes 26–37 and Nitrosyl Complexes 38–43 Using ⟨ρ⟩0.06 Values at B3LYP/def2-TZVP Level of Theorya,b
| experimental | calculated | ||||||
|---|---|---|---|---|---|---|---|
| complex | OS | δ4.2K | ρ(0) | ⟨ρ⟩0.06 | δ | code | |
| (26) Fe2(μ–O2C–CH3)4(C5H5N)2 | 0 | +2 | 1.12 | 11580.389 | 1.346848 | 1.13 | EGAFUN |
| +2 | 1.12 | 11580.358 | 1.346845 | 1.14 | |||
| (27) Fe2(μ–O2C–CH3)2(O2C–CH3)2–(THF)2 | 4 | +2 | 1.26 | 11580.472 | 1.346851 | 1.12 | EGAFAT |
| +2 | 1.26 | 11580.428 | 1.346847 | 1.13 | |||
| (27a) Fe2(μ–O2C–CH3)2(O2C–CH3)2–(THF)2 | 0 | +2 | 1.26 | 11580.378 | 1.346840 | 1.15 | EGAFAT |
| +2 | 1.26 | 11580.344 | 1.346839 | 1.15 | |||
| (28) Fe2(μ–O2C–CH3)2(O2C–CH3)2–(NH2CH2CH3)2 | 4 | +2 | 1.19 | 11580.525 | 1.346848 | 1.13 | ADIGID |
| +2 | 1.19 | 11580.525 | 1.346849 | 1.13 | |||
| (28a) Fe2(μ–O2C–CH3)2(O2C–CH3)2–(NH2CH2CH3)2 | 0 | +2 | 1.19 | 11580.531 | 1.346848 | 1.13 | ADIGID |
| +2 | 1.19 | 11580.547 | 1.346854 | 1.12 | |||
| (29) Fe2(μ–OH2)2(μ–O2C–CH3)2–(O2C–CH3)3(THF)2(OH2) | 4 | +2 | 1.35 | 11579.864 | 1.346780 | 1.31 | FEMTEX |
| +2 | 1.35 | 11579.769 | 1.346778 | 1.31 | |||
| (29a) Fe2(μ–OH2)2(μ–O2C–CH3)2–(O2C–CH3)3(THF)2(OH2) | 0 | +2 | 1.35 | 11579.919 | 1.346784 | 1.30 | FEMTEX |
| +2 | 1.35 | 11579.766 | 1.346778 | 1.31 | |||
| (30) Fe2BPMP(OPr)2+ | 0 | +2 | 1.24 | 11579.595 | 1.346802 | 1.25 | GATFUC |
| +2 | 1.24 | 11579.599 | 1.346803 | 1.25 | |||
| (31) Fe(II)Fe(III)BPMP(OPr)22+ | 1/2 | +2 | 1.15 | 11580.316 | 1.346865 | 1.09 | GATFOW |
| +3 | 0.50 | 11581.514 | 1.347034 | 0.65 | |||
| (32) Fe2(O2CH)2(BIPhMe)2 | 0 | +2 | 1.26 | 11579.831 | 1.346800 | 1.26 | SISKOU |
| +2 | 1.25 | 11580.319 | 1.346840 | 1.15 | |||
| (33) Fe2(OAc)2(TPA)22+ | 0 | +2 | 1.12 | 11580.138 | 1.346832 | 1.17 | VUNMIA |
| +2 | 1.12 | 11580.215 | 1.346844 | 1.14 | |||
| (34) Fe2(ImH)2(XDK)(O2CPh)2(MeOH) | 0 | +2 | 1.35 | 11579.625 | 1.346778 | 1.31 | YUZKAF10 |
| +2 | 1.12 | 11580.718 | 1.346874 | 1.06 | |||
| (35) Fe2(py)2(O2CArMes)4 | 0 | +2 | 1.14 | 11580.408 | 1.346853 | 1.12 | XIGDIA |
| +2 | 1.14 | 11580.409 | 1.346853 | 1.12 | |||
| (36) Fe2(H2O)(O2CPh)4(TMEN)2 | 0 | +2 | 1.25 | 11579.860 | 1.346793 | 1.28 | VUPJUL |
| +2 | 1.26 | 11579.807 | 1.346791 | 1.28 | |||
| (37) Fe2(H2O)(OAc)4(TMEN)2 | 2 | +2 | 1.27 | 11580.012 | 1.346818 | 1.21 | VUPJOF |
| +2 | 1.27 | 11580.013 | 1.346817 | 1.21 | |||
| (38) Fe(NO)2(S(p-Me)Ph)2– | 2 | +2 | 0.18 | 11582.701 | 1.347132 | 0.40 | SONMUE |
| (39) [Fe(SC2H3N3)(SC2H2N3)(NO)2] | 5/2 | +3 | 0.19 | 11583.189 | 1.347218 | 0.17 | EYABOV |
| (40) Fe2(S- | 0 | +3 | 0.15 | 11583.320 | 1.347249 | 0.09 | GIDKIN02 |
| +3 | 0.15 | 11583.320 | 1.347249 | 0.09 | |||
| (41)
Fe(S- | 5/2 | +3 | 0.26 | 11583.138 | 1.347180 | 0.27 | WEDXAF |
| (42) [Fe(NO)(dtc | 3/2 | +3 | 0.35 | 11582.603 | 1.347143 | 0.37 | PRCBFE |
| (43) [Fe2(NO)2(Et-HPTB)(O2CPh)]2+ | 0 | +3 | 0.67 | 11581.513 | 1.347036 | 0.64 | RABHAD |
| +3 | 0.67 | 11581.532 | 1.347039 | 0.64 |
Electron densities in atomic units.
The ligands are encoded as follows: BPMP = 2,6-bis(bis(2-pyridylmethyl) aminomethyl))-4-methylphenolato, BIPhMe = bis(1-methylamidazol-2-yl)phenylmethoxymethane, ImH = imidazole, XDK = acid anion of m-xylenediamine bis(Kemp’s triacid)-imide, HO2CArMes = 2,6-bis(mesityl)benzoic acid, TMEN = N,N,N′,N′-tetramethylethylenediamine, Et-HPTB = N,N,N′,N′-tetrakis(N-ethyl-2-benzimidazolylmethyl)-1,3,diaminopropane).
Figure 5Correlation between the experimental and calculated QS (B3LYP) values for all Fe complexes (103 Fe sites in total).