| Literature DB >> 34804922 |
Guoxue Zhu1, Yi Wang2, Wang Wang3, Fang Shang2, Bin Pei2, Yang Zhao1, Desong Kong4, Zhimin Fan2.
Abstract
BACKGROUND: Colorectal cancer (CRC) is one of the most common malignant gastrointestinal cancers in the world with a 5-year survival rate of approximately 68%. Although researchers accumulated many scientific studies, its pathogenesis remains unclear yet. Detecting and removing these malignant polyps promptly is the most effective method in CRC prevention. Therefore, the analysis and disposal of malignant polyps is conducive to preventing CRC.Entities:
Keywords: GC-MS; cancer tissue and paracarcinoma tissue; colorectal cancer; metabolomics; preoperative and postoperative serum
Year: 2021 PMID: 34804922 PMCID: PMC8599589 DOI: 10.3389/fonc.2021.729512
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1The schematic diagram of the experimental design.
Clinical features of colorectal cancer patients enrolled in this study.
| Characteristics | Number |
|---|---|
| Gender (male/female) | 28/20 |
| Age (mean ± SD) [min, max] | 65 ± 12 [36, 85] |
| Median age among male | 67 |
| Median age among female | 67 |
| Blood glucose (mmol/L) (mean ± SD) [min, max] | 5.07 ± 0.63 [3.90, 6.80] |
| Body mass index (kg/m2) (mean ± SD) [min, max] | 22.95 ± 3.20 [17.19, 30.39] |
| Tumor sites | |
| Colorectal (number) | 21 |
| Sigmoid colon (number) | 10 |
| Descending colon (number) | 2 |
| Ascending colon (number) | 15 |
| Pathologic subtypes | |
| Adenocarcinoma (number) | 46 |
| Mucoid carcinoma | 2 |
| Tumor size (cm) [min, max] | 2.5 × 2 × 0.8, 11 × 7 × 3 |
| Differentiation | |
| Low | 6 |
| Medium-low | 10 |
| Medium | 31 |
| High | 1 |
| Infiltration | |
| Adventitia | 11 |
| Deep myometrial | 4 |
| Serosal | 26 |
| Submucosal | 6 |
| Peripheral adipose | 1 |
| Tumor stage | |
| I | 7 |
| II | 19 |
| III | 21 |
| IV | 1 |
Figure 2Total ion chromatogram of cancer tissue (A) and paracarcinoma tissue (B) and preoperative (C) and postoperative (D) serum of 2 weeks in positive-ion mode.
Figure 3(A) PCA score plot of cancer tissue and paracarcinoma tissue samples in positive-ion mode with the statistical parameters (R2X = 0.964, Q2 = 0.897). (B) S-plot of OPLS-DA with the statistical parameters in positive-ion mode (R2X = 0.940, R2Y = 0.756, Q2 = 0.743). (C) VIP value plot between cancer tissue and paracarcinoma tissue samples in positive-ion mode. (D) Validation plot of the cancer tissue and paracarcinoma tissue samples in positive-ion mode obtained from 200 permutation tests.
Figure 4(A) PCA score plot of preoperative and postoperative serum of 2-week samples in positive-ion mode with the statistical parameters (R2X = 0.965, Q2 = 0.823). (B) S-plot of OPLS-DA with the statistical parameters in positive-ion mode (R2X = 0.939, R2Y = 0.639, Q2 = 0.844). (C) VIP value plot between preoperative and postoperative serum of 2-week samples in positive-ion mode. (D) Validation plot of the preoperative and postoperative serum of 2-week samples in positive-ion mode obtained from 200 permutation tests.
The identification of potential biomarkers in tissue level based on GC-MS.
| Differential metabolites | m/z | RT | VIP | Fold change | p |
|---|---|---|---|---|---|
|
| |||||
| L-Lactic acid | 318.0358 | 7.31 | 1.15 | 2.87 | 1.15E-10 |
| 2,3-Butanediol | 116.0217 | 7.78 | 1.16 | 0.19 | 9.97E-06 |
| 3-Hydroxybutyric acid | 373.0875 | 8.94 | 1.26 | 3.07 | 2.43E-16 |
| allo-Inositol | 405.1945 | 19.73 | 1.07 | 0.49 | 9.11E-09 |
| Cholesterol | 75.0181 | 27.94 | 1.06 | 0.39 | 1.12E-08 |
| Allose | 97.0683 | 17.98 | 1.21 | 4.02 | 7.61E-15 |
| chiro-Inositol | 381.1673 | 19.73 | 1.05 | 0.51 | 5.93E-08 |
| d-Mannose | 138.0889 | 17.98 | 1.23 | 5.89 | 6.43E-16 |
| Heptadecanoic acid | 146.0376 | 20.24 | 1.01 | 0.40 | 3.63E-08 |
| Inositol | 391.1874 | 19.73 | 1.12 | 0.48 | 1.25E-08 |
| Malic acid | 233.0896 | 13.2 | 1.05 | 0.09 | 1.40E-09 |
| Muco-inositol | 407.1886 | 19.73 | 1.01 | 0.53 | 6.86E-08 |
| myo-Inositol | 164.0926 | 19.76 | 1.24 | 9.40 | 7.65E-21 |
| Oleic acid | 117.0078 | 20.24 | 1.02 | 0.39 | 6.86E-08 |
| Pentasiloxane | 354.04859 | 8.92 | 1.26 | 2.94 | 1.05E-11 |
| scyllo-Inositol | 365.1554 | 19.73 | 1.08 | 0.48 | 1.01E-08 |
| Stearic acid | 116.0083 | 20.24 | 1.01 | 0.40 | 1.11E-07 |
|
| |||||
| Stearic acid | 298.2655 | 21.19 | 1.38 | 1.91 | 1.35E-02 |
| 3-Hydroxybutyric acid | 86.0744 | 8.93 | 2.13 | 5.99 | 2.90E-02 |
| 9,12-Octadecadienoic acid | 264.2632 | 20.98 | 2.24 | 3.63 | 6.28E-03 |
| Cholestane-3,5-diol | 329.3586 | 28.00 | 1.35 | 2.58 | 1.40E-02 |
| Cholesterol | 340.3024 | 20.98 | 2.16 | 3.50 | 4.01E-04 |
| Glucose | 96.0857 | 20.96 | 2.12 | 3.31 | 1.49E-02 |
| elaidic acid | 339.2998 | 20.97 | 2.16 | 3.17 | 8.60E-03 |
| γ-Tocopherol | 504.4245 | 27.86 | 1.58 | 2.35 | 8.40E-03 |
| L-5-Oxoproline | 258.0370 | 13.73 | 1.92 | 4.68 | 2.11E-03 |
| Oleic acid | 138.1276 | 20.96 | 2.19 | 3.51 | 1.31E-02 |
| Palmitic acid | 285.2381 | 19.40 | 1.44 | 2.04 | 1.60E-02 |
| trans-13-Octadecenoic acid | 84.0748 | 20.97 | 2.11 | 3.10 | 1.69E-02 |
| Xanthotoxin | 356.3373 | 21.18 | 1.06 | 1.78 | 1.33E-02 |
Figure 5Heatmap of differential metabolites between cancer tissue and paracarcinoma tissue samples (A) and preoperative and postoperative serum of 2-week samples (B).
Result from ingenuity pathway analysis with MetaboAnalyst 5.0.
| Pathway name | Match status | p | -log(p) | FDR | Impact |
|---|---|---|---|---|---|
|
| |||||
| Biosynthesis of unsaturated fatty acids | 2/36 | 0.025294 | 1.579 | 1 | 0 |
| Synthesis and degradation of ketone bodies | 1/5 | 0.035028 | 1.4556 | 1 | 0 |
| Ascorbate and aldarate metabolism | 1/8 | 0.055506 | 1.2557 | 1 | 0 |
| Butanoate metabolism | 1/15 | 0.10176 | 0.99242 | 1 | 0 |
| Pyruvate metabolism | 1/22 | 0.14595 | 0.83581 | 1 | 0 |
| Glycolysis/gluconeogenesis | 1/26 | 0.1703 | 0.76879 | 1 | 0 |
| Galactose metabolism | 1/27 | 0.17629 | 0.75378 | 1 | 0 |
| Phosphatidylinositol signaling system | 1/28 | 0.18224 | 0.73936 | 1 | 0.03736 |
| Inositol phosphate metabolism | 1/30 | 0.19402 | 0.71216 | 1 | 0.12939 |
| Steroid biosynthesis | 1/42 | 0.26153 | 0.58248 | 1 | 0.0282 |
| Primary bile acid biosynthesis | 1/46 | 0.28286 | 0.54843 | 1 | 0.05065 |
| Steroid hormone biosynthesis | 1/85 | 0.46338 | 0.33406 | 1 | 0.00528 |
|
| |||||
| Biosynthesis of unsaturated fatty acids | 4/36 | 7.2193E-05 | 4.1415 | 0.0060643 | 0 |
| Synthesis and degradation of ketone bodies | 1/5 | 0.035028 | 1.4556 | 0.98079 | 0 |
| Linoleic acid metabolism | 1/5 | 0.035028 | 1.4556 | 0.98079 | 1 |
| Butanoate metabolism | 1/15 | 0.10176 | 0.99242 | 1 | 0 |
| Glycolysis/gluconeogenesis | 1/26 | 0.1703 | 0.76879 | 1 | 2.10E-04 |
| Glutathione metabolism | 1/28 | 0.18224 | 0.73936 | 1 | 0.00709 |
| Fatty acid elongation | 1/39 | 0.24515 | 0.61057 | 1 | 0 |
| Fatty acid degradation | 1/39 | 0.24515 | 0.61057 | 1 | 0 |
| Steroid biosynthesis | 1/42 | 0.26153 | 0.58248 | 1 | 0.0282 |
| Primary bile acid biosynthesis | 1/46 | 0.28286 | 0.54843 | 1 | 0.05065 |
| Fatty acid biosynthesis | 1/47 | 0.2881 | 0.54045 | 1 | 0.01473 |
| Steroid hormone biosynthesis | 1/85 | 0.46338 | 0.33406 | 1 | 0.00528 |
| Biosynthesis of unsaturated fatty acids | 4/36 | 7.2193E-05 | 4.1415 | 0.0060643 | 0 |
| Synthesis and degradation of ketone bodies | 1/5 | 0.035028 | 1.4556 | 0.98079 | 0 |
| Linoleic acid metabolism | 1/5 | 0.035028 | 1.4556 | 0.98079 | 1 |
Figure 6Pathway enrichment analysis of CRC in cancer tissue and paracarcinoma tissue samples (A, B) and preoperative and postoperative serum of 2-week sample (C, D) levels.
Figure 7Schematic diagram of the disturbed metabolic pathway related to CRC.