Literature DB >> 34791508

An extended Human Connectome Project multimodal parcellation atlas of the human cortex and subcortical areas.

Chu-Chung Huang1, Edmund T Rolls2,3,4, Jianfeng Feng5,6, Ching-Po Lin5,7,8.   

Abstract

A modified and extended version, HCPex, is provided of the surface-based Human Connectome Project-MultiModal Parcellation atlas of human cortical areas (HCP-MMP v1.0, Glasser et al. 2016). The original atlas with 360 cortical areas has been modified in HCPex for ease of use with volumetric neuroimaging software, such as SPM, FSL, and MRIcroGL. HCPex is also an extended version of the original atlas in which 66 subcortical areas (33 in each hemisphere) have been added, including the amygdala, thalamus, putamen, caudate nucleus, nucleus accumbens, globus pallidus, mammillary bodies, septal nuclei and nucleus basalis. HCPex makes available the excellent parcellation of cortical areas in HCP-MMP v1.0 to users of volumetric software, such as SPM and FSL, as well as adding some subcortical regions, and providing labelled coronal views of the human brain.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Extended HCP atlas; HCPex; Human Connectome Project; Neuroimaging atlas; fMRI

Mesh：

Year:  2021        PMID： 34791508     DOI： 10.1007/s00429-021-02421-6

Source DB:  PubMed          Journal:  Brain Struct Funct        ISSN： 1863-2653            Impact factor:   3.270


  30 in total

1.  High-resolution intersubject averaging and a coordinate system for the cortical surface.

Authors:  B Fischl; M I Sereno; R B Tootell; A M Dale
Journal:  Hum Brain Mapp       Date:  1999       Impact factor: 5.038

2.  Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.

Authors:  Bruce Fischl; David H Salat; Evelina Busa; Marilyn Albert; Megan Dieterich; Christian Haselgrove; Andre van der Kouwe; Ron Killiany; David Kennedy; Shuna Klaveness; Albert Montillo; Nikos Makris; Bruce Rosen; Anders M Dale
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3.  Automatically parcellating the human cerebral cortex.

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Journal:  Cereb Cortex       Date:  2004-01       Impact factor: 5.357

4.  Testing anatomically specified hypotheses in functional imaging using cytoarchitectonic maps.

Authors:  Simon B Eickhoff; Stefan Heim; Karl Zilles; Katrin Amunts
Journal:  Neuroimage       Date:  2006-06-14       Impact factor: 6.556

5.  Performing label-fusion-based segmentation using multiple automatically generated templates.

Authors:  M Mallar Chakravarty; Patrick Steadman; Matthijs C van Eede; Rebecca D Calcott; Victoria Gu; Philip Shaw; Armin Raznahan; D Louis Collins; Jason P Lerch
Journal:  Hum Brain Mapp       Date:  2012-05-19       Impact factor: 5.038

6.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

7.  A reliable protocol for the manual segmentation of the human amygdala and its subregions using ultra-high resolution MRI.

Authors:  Jonathan J Entis; Priya Doerga; Lisa Feldman Barrett; Bradford C Dickerson
Journal:  Neuroimage       Date:  2012-01-05       Impact factor: 6.556

8.  The impact of traditional neuroimaging methods on the spatial localization of cortical areas.

Authors:  Timothy S Coalson; David C Van Essen; Matthew F Glasser
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-20       Impact factor: 11.205

9.  A reproducible evaluation of ANTs similarity metric performance in brain image registration.

Authors:  Brian B Avants; Nicholas J Tustison; Gang Song; Philip A Cook; Arno Klein; James C Gee
Journal:  Neuroimage       Date:  2010-09-17       Impact factor: 6.556

10.  Ciftify: A framework for surface-based analysis of legacy MR acquisitions.

Authors:  Erin W Dickie; Alan Anticevic; Dawn E Smith; Timothy S Coalson; Mathuvanthi Manogaran; Navona Calarco; Joseph D Viviano; Matthew F Glasser; David C Van Essen; Aristotle N Voineskos
Journal:  Neuroimage       Date:  2019-05-12       Impact factor: 6.556
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  2 in total

1.  Extensive Cortical Connectivity of the Human Hippocampal Memory System: Beyond the "What" and "Where" Dual Stream Model.

Authors:  Chu-Chung Huang; Edmund T Rolls; Chih-Chin Heather Hsu; Jianfeng Feng; Ching-Po Lin
Journal:  Cereb Cortex       Date:  2021-08-26       Impact factor: 5.357

2.  A framework For brain atlases: Lessons from seizure dynamics.

Authors:  Andrew Y Revell; Alexander B Silva; T Campbell Arnold; Joel M Stein; Sandhitsu R Das; Russell T Shinohara; Dani S Bassett; Brian Litt; Kathryn A Davis
Journal:  Neuroimage       Date:  2022-03-23       Impact factor: 7.400
  2 in total

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