| Literature DB >> 34790822 |
Zahra Heidari1, Saeedeh Salimi2,3, Mohsen Rokni4, Mahnaz Rezaei2,3, Neshat Khalafi5, Mahdieh Jafari Shahroudi3, Azizallah Dehghan6, Mohsen Saravani2,3.
Abstract
BACKGROUND: Grave's disease (GD) and Hashimoto's thyroiditis (HT) are autoimmune diseases of the thyroid gland in which genetic predisposition plays a major role in their development. Currently, the role of NLRP3 inflammasome and COX-2 has been documented in many autoimmune diseases. The purpose of the study is to delineate the impact of IL-1β (rs1143634), NLRP3 (rs3806265), and COX-2 (rs2745557) gene polymorphisms in the development of GD and HT.Entities:
Mesh:
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Year: 2021 PMID: 34790822 PMCID: PMC8592725 DOI: 10.1155/2021/7729238
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Primers and restriction enzymes used for RFLP-PCR method.
| Gene and SNP number | Primers | Restriction enzyme | DNA fragment size (bp) |
|---|---|---|---|
| IL-1 | F: GTTGTCATCAGACTTTGACC | Taq I | TT = 249 |
| COX-2 (rs2745557) | F: GAGGTGAGAGTGTCTCAGAT | Taq I | GG = 439 |
| NLRP3 (rs3806265) | F: TTGGCAGGTGGACAGCAGCA | Pvu II | TT = 127 |
F: forward; R: reverse.
Demographic and clinical characteristics of Hashimoto (HT) patients and controls.
| HT | Control |
| |
|---|---|---|---|
| Age, years | 33.99 ± 11.53 | 35.77 ± 11.25 | 0.196 |
| Gender | |||
| Male (%) | 10 (7.6) | 21 (14.48) | 0.072 |
| Female (%) | 121 (92.4) | 124 (85.52) | |
| BMI (kg/m2) | 26.8 ± 5.8 | ||
| Onset age | 31.36 ± 10.7 | ||
| Other autoimmune disorders history (%) | 2 (1.52) | ||
| Family history (%) | 41 (31.29) | ||
| Smoking history (%) | 11 (8.4) | ||
| Thyroid size (ml) | 8.21 ± 0.52 | ||
| Free T4 (ng/dl + SEM) | 0.477 ± 0.013 | ||
| Free T3 (pg/ml ± SEM) | 1.6 ± 0.033 | ||
| TSH (mU/L ± SEM) | 62.38 ± 2.5 | ||
| Thyroid peroxidase antibody (TPOAb) (IU/ml ± SEM) | 453 ± 41.76 | ||
| Antithyroglobulin antibody (IU/ml ± SEM) | 732 ± 122 |
Demographic and clinical characteristics of Graves' patients and controls.
| Graves' | Control |
| |
|---|---|---|---|
| Age, years | 35.37 ± 11.88 | 35.77 ± 11.25 | 0.774 |
| Gender | |||
| Male (%) | 28 (22.4) | 21 (14.48) | 0.092 |
| Female (%) | 97 (77.6) | 124 (85.52) | |
| BMI | 23.06 ± 0.43 | ||
| Onset age | 34.38 ± 1.06 | ||
| Other autoimmune disorders history (%) | 1 (0.8) | ||
| Family history (%) | 40 (32) | ||
| Smoking history (%) | 20 (16) | ||
| Thyroid volume (ml) | 21.8 ± 1.53 | ||
| Free T4 (ng/dl + SEM) | 3.14 ± 1.04 | ||
| Free T3 (pg/ml ± SEM) | 6.64 ± 0.18 | ||
| TSH (mU/L ± SEM) | 0.016 ± 0.002 | ||
| Graves ophthalmopathy | 28 (22.4) |
Allelic and genotypic frequency of NLRP3, COX-2, and IL-1β polymorphisms in Hashimoto's thyroiditis (HT) and control groups.
| Polymorphism | HT | Control |
| OR (95% CI) |
|---|---|---|---|---|
| IL-1 | ||||
| Codominant | ||||
| CC | 42 (31.1) | 52 (35.9) | 1 | 1 |
| CT | 80 (59.2) | 66 (45.5) | 0.131 | 1.5 (0.89-2.5) |
| TT | 13 (9.7) | 27 (18.6) | 0.157 | 0.56 (0.25-1.24) |
| Dominant | ||||
| CC | 42 (31.1) | 52 (35.9) | 1 | 1 |
| CT + TT | 93 (68.9) | 93 (64.1) | 0.423 | 1.2 (0.74-2) |
| Recessive | ||||
| CC + CT | 123 (90.3) | 125 (81.4) | 1 | 1 |
| TT | 13 (9.7) | 27 (18.6) | 0.03 | 0.67 (0.21-0.91) |
| Overdominant | ||||
| CC + TT | 53 (40.8) | 79 (54.5) | 1 | 1 |
| CT | 80 (59.2) | 66 (45.5) | 0.03 | 1.1 (0.76-1.8) |
| Allele | ||||
| C | 164 (60.7) | 170 (58.6) | 1 | 1 |
| T | 106 (39.3) | 120 (41.4) | 0.389 | 0.86 (0.6-1.2) |
| NLRP3 (rs3806265) | ||||
| Codominant | ||||
| TT | 45 (33.3) | 59 (40.7) | 1 | 1 |
| CT | 61 (45.2) | 59 (40.7) | 0.279 | 1.3 (0.78 –2.2) |
| CC | 29 (21.5) | 27 (18.6) | 0.325 | 1.4 (0.72-2.5) |
| Dominant | ||||
| TT | 45 (33.3) | 59 (40.7) | 1 | 1 |
| CT + CC | 90 (66.7) | 86 (59.3) | 0.224 | 1.35 (0.83-2.2) |
| Recessive | ||||
| TT + CT | 106 (78.5) | 118 (81.4) | 1 | 1 |
| CC | 29 (21.5) | 27 (18.6) | 0.568 | 1.2 (0.65-2.1) |
| Overdominant | ||||
| TT + CC | 74 (54.8) | 86 (59.3) | 1 | 1 |
| CT | 61 (45.2) | 59 (40.7) | 0.466 | 1.2 (0.74-1.9) |
| Allele | ||||
| T | 151 (55.9) | 177 (61) | 1 | 1 |
| C | 119 (44.1) | 113 (39) | 0.26 | 1.2 (0.87-1.7) |
| COX-2 (rs2745557) | ||||
| Codominant | ||||
| GG | 88 (65.2) | 77 (53.1) | 1 | 1 |
| GA | 36 (26.6) | 59 (40.6) | 0.017 | 0.53 (0.31-0.89) |
| AA | 11 (8.2) | 9 (6.3) | 0.991 | 0.99 (0.38-2.5) |
| Dominant | ||||
| GG | 88 (65.2) | 77 (53.1) | 1 | 1 |
| GA + AA | 47 (34.8) | 68 (46.9) | 0.035 | 0.56 (0.36-0.96) |
| Recessive | ||||
| GG + GA | 124 (91.8) | 136 (93.7) | 1 | 1 |
| AA | 11 (8.2) | 9 (6.3) | 0.641 | 1.24 (0.49-3.1) |
| Overdominant | ||||
| GG + AA | 99 (73.4) | 66 (59.4) | 1 | 1 |
| GA | 36 (26.6) | 59 (40.6) | 0.015 | 0.53 (0.31-0.89) |
| Allele | ||||
| G | 212 (78.5) | 213 (73.5) | 1 | 1 |
| A | 58 (21.5) | 77 (26.5) | 0.73 | 0.49 (0.31-0.88) |
Allelic and genotypic frequency of NLRP3, COX-2, and IL-1β polymorphisms in Graves' disease (GD) and control groups.
| Polymorphism | GD | Control |
| OR (95% CI) |
|---|---|---|---|---|
| IL-1 | ||||
| Codominant | ||||
| CC | 56 (44.8) | 52 (35.9) | 1 | 1 |
| CT | 62 (49.6) | 66 (45.5) | 0.601 | 0.87 (0.52-1.45) |
| TT | 7 (5.6) | 27 (18.6) | 0.002 | 0.24 (0.097-0.6) |
| Dominant | ||||
| CC | 56 (44.8) | 52 (35.9) | 1 | 1 |
| CT + TT | 68 (55.2) | 93 (64.1) | 0.136 | 0.69 (0.42-1.1) |
| Recessive | ||||
| CC + CT | 118 (94.4) | 125 (81.4) | 1 | 1 |
| TT | 7 (5.6) | 27 (18.6) | 0.002 | 0.26 (0.11-0.6) |
| Overdominant | ||||
| CC + TT | 63 (50.4) | 79 (54.5) | 1 | 1 |
| CT | 62 (49.6) | 66 (45.5) | 0.503 | 1.1 (0.72-1.9) |
| Allele | ||||
| C | 174 (69.6) | 170 (58.6) | 1 | 1 |
| T | 76 (30.4) | 120 (41.4) | 0.009 | 0.61 (0.43-0.88) |
| NLRP3 (rs3806265) | ||||
| Codominant | ||||
| TT | 43 (34.4) | 59 (40.7) | 1 | 1 |
| CT | 46 (36.8) | 59 (40.7) | 0.81 | 1.07 (0.61 –1.83) |
| CC | 36 (28.8) | 27 (18.6) | 0.062 | 1.8 (0.96-3.4) |
| Dominant | ||||
| TT | 43 (34.4) | 59 (40.7) | 1 | 1 |
| CT + CC | 82 (65.6) | 86 (59.3) | 0.288 | 1.3 (0.8-2.1) |
| Recessive | ||||
| TT + CT | 89 (71.2) | 118 (81.4) | 1 | 1 |
| CC | 36 (28.8) | 27 (18.6) | 0.05 | 1.7 (1-1.3) |
| Overdominant | ||||
| TT + CC | 79 (63.2) | 86 (59.3) | 1 | 1 |
| CT | 46 (36.8) | 59 (40.7) | 0.513 | 0.85 (0.51-1.3) |
| Allele | ||||
| T | 132 (52.8) | 177 (61) | 1 | 1 |
| C | 118 (47.2) | 113 (39) | 0.055 | 1.4 (0.99-1.9) |
| COX-2 (rs2745557) | ||||
| Codominant | ||||
| GG | 66 (52.8) | 77 (53.1) | 1 | 1 |
| GA | 47 (37.6) | 59 (40.6) | 0.776 | 0.92 (0.56-1.5) |
| AA | 12 (9.6) | 9 (6.3) | 0.349 | 1.55 (0.61-3.5) |
| Dominant | ||||
| GG | 66 (52.8) | 77 (53.1) | 1 | 1 |
| GA + AA | 59 (47.2) | 68 (46.9) | 0.96 | 1 (0.62-1.6) |
| Recessive | ||||
| GG + GA | 113 (90.4) | 136 (93.7) | 1 | 1 |
| AA | 12 (9.6) | 9 (6.3) | 0.303 | 1.6 (0.65-3.9) |
| Overdominant | ||||
| GG + AA | 78 (62.4) | 86 (59.4) | 1 | 1 |
| GA | 47 (37.6) | 59 (40.6) | 0.604 | 0.88 (0.53-1.4) |
| Allele | ||||
| G | 179 (71.6) | 213 (73.5) | 1 | 1 |
| A | 71 (28.4) | 77 (26.5) | 0.698 | 1 (0.75-1.6) |
Association of NLRP3, COX-2, and IL-1β SNPs with clinical and demographic characteristics of HT and GD groups.
| HT group | ||||||
|---|---|---|---|---|---|---|
| Mean ± SEM | Genotypes | |||||
| NLRP3 SNP | TT | CT | CC | CT vs. TT | CC vs. TT | CT vs. CC |
| Anti-TPO | 411.9 ± 74.4 | 576.7 ± 64.4 | 270.2 ± 50.8 | 0.169 | 0.402 | 0.011 |
| IL-1 | CC | CT | TT | CT vs. CC | TT vs. CC | CT vs. TT |
| Age of onset | 30.09 ± 1.5 | 33 ± 1.2 | 25.08 ± 2.6 | 0.311 | 0.311 | 0.011 |
| GD group | ||||||
| Mean ± SEM | Genotypes | |||||
| NLRP3 SNP | TT | CT | CC | CT vs. TT | CC vs. TT | CT vs. CC |
| FT4 | 3.6 ± 0.23 | 3.1 ± 0.13 | 2.63 ± 0.11 | 0.088 | 0.001 | 0.148 |
| FT3 | 7.45 ± 0.36 | 6.54 ± 0.27 | 5.79 ± 0.27 | 0.087 | 0.001 | 0.209 |
| COX-2 SNP | GG | GA | AA | GA vs. GG | AA vs. GG | GA vs. AA |
| TSH | 0.0105 ± 0.002 | 0.025 ± 0.005 | 0.015 ± 0.002 | 0.019 | 0.901 | 0.106 |
| IL-1 | CC | CT | TT | CT vs. CC | TT vs. CC | CT vs. TT |
| TSH | 0.01 ± 0.002 | 0.0176 ± 0.004 | 0.045 ± 0.019 | 0.321 | 0.008 | 0.045 |