BACKGROUND: Breast cancer (BC) is the most common cancer diagnosed among women and is the second leading cause of cancer death. It is of great significance to explore potential candidate targets for BC. METHODS: The expression of ubiquitin-specific protease 41 (USP41) and its prognosis prediction function was firstly evaluated by TCGA database analysis. Using BC cell lines and specimens from 10 patients with primary BC, the upregulation of USP41 in BC was ensured. By USP41 overexpression or knockdown, its function was studied by cell function assays, small interfering RNA (siRNA), western blot, mass spectrometry, and flow cytometry. The potential mechanism of USP41 was explored via Co-Immunoprecipitation mass spectrometry, and western blot. RESULTS: TCGA database analysis revealed that in metastatic BC, USP41 expression was upregulated and negatively correlated with BC prognosis. In BC cancer cells and cancer specimens, USP41 was also upregulated. Overexpression of USP41 greatly enhanced BC colony-forming ability, proliferation, and migration. In contrast, USP41 knockdown significantly inhibited BC colony-forming ability, proliferation, and migration. Moreover, Co-Immunoprecipitation mass spectrometry results indicated that USP41 could interact with RACK1. USP41 promoted the protein expression of RACK1. The expression of RACK1 in BC tissues was upregulated. Knockdown of RACK1 inhibited cell growth and migration, and reversed the oncogenic function of USP41 in BC cells. CONCLUSIONS: USP41 can be a potential therapeutic target against BC via RACK1. 2021 Annals of Translational Medicine. All rights reserved.
BACKGROUND: Breast cancer (BC) is the most common cancer diagnosed among women and is the second leading cause of cancer death. It is of great significance to explore potential candidate targets for BC. METHODS: The expression of ubiquitin-specific protease 41 (USP41) and its prognosis prediction function was firstly evaluated by TCGA database analysis. Using BC cell lines and specimens from 10 patients with primary BC, the upregulation of USP41 in BC was ensured. By USP41 overexpression or knockdown, its function was studied by cell function assays, small interfering RNA (siRNA), western blot, mass spectrometry, and flow cytometry. The potential mechanism of USP41 was explored via Co-Immunoprecipitation mass spectrometry, and western blot. RESULTS: TCGA database analysis revealed that in metastatic BC, USP41 expression was upregulated and negatively correlated with BC prognosis. In BC cancer cells and cancer specimens, USP41 was also upregulated. Overexpression of USP41 greatly enhanced BC colony-forming ability, proliferation, and migration. In contrast, USP41 knockdown significantly inhibited BC colony-forming ability, proliferation, and migration. Moreover, Co-Immunoprecipitation mass spectrometry results indicated that USP41 could interact with RACK1. USP41 promoted the protein expression of RACK1. The expression of RACK1 in BC tissues was upregulated. Knockdown of RACK1 inhibited cell growth and migration, and reversed the oncogenic function of USP41 in BC cells. CONCLUSIONS: USP41 can be a potential therapeutic target against BC via RACK1. 2021 Annals of Translational Medicine. All rights reserved.
Entities:
Keywords:
Ubiquitin-specific protease 41 (USP41); breast cancer (BC); receptor for activated C kinase 1 (RACK1)
Breast cancer (BC) is the most common cancer diagnosed among women and is the second leading cause of cancer death (1). In 2019, approximately 268,600 new cases of invasive BC and 48,100 cases of ductal carcinoma in situ (DCIS) were diagnosed among US women, and 41,760 women died from this disease (2). Similarly, in China, the incidence rate of BC has increased obviously both in urban and rural areas (3); however, the 5-year survival rate of BC in China is 73%, significantly lower than that in developed countries (4). With the development of precision medicine and targeted therapeutics, BC treatment has also begun to evolve toward a more individualized, precise, and targeted approach (5). As a highly heterogeneous disease, BC involves a complex etiology, including genetic alterations, reproductive factors, and environmental factor (6). Hence, it is of great significance to gain a better understanding of the mechanisms underlying BC and to develop novel and effective therapeutic strategies (7).Ubiquitination can regulate a variety of complex cellular processes and may lead to the activation or deactivation of tumorigenic pathways in cancer (8,9). Deubiquitinating enzymes (DUBs), reversing the ubiquitination process by removal of ubiquitin, have emerged as promising drug targets for cancer therapy. The DUBs can be divided into 6 subclasses: ubiquitin C-terminal hydrolases (UCHs), ubiquitin-specific proteases (USPs or UBPs), ovarian tumor proteases (OTUs), Machado-Joseph disease proteases (MJDs), JAB1/MPN/Mov34 metalloenzymes (JAMMs), and monocyte chemotactic protein-induced deubiquitin family (MCPIPs). Among the 6 structurally different DUB families, the largest group comprises the ubiquitin-specific proteases (USPs) that belong to the cysteine protease family (10,11). Many studies have indicated that USPs regulate tumor formation by modulating the proliferation and death of cancer cells. In 2019, Zhang et al. showed that USP22 plays critical roles in the malignancy and progression of non-small cell lung cancer (12). In 2020, ubiquitin-specific protease 41 (USP14) was shown to promote prostate cancer progression through deubiquitinating the transcriptional factor ATF2 (13). Lai et al. found that low expression of USP4 was associated with poor survival among lung cancer patients (14). Yun et al. considered USP21 an attractive therapeutic target in metastatic colorectal cancer with high Fra-1 expression (15). In 2004, USP41 was first identified in human prostate, brain, lungs, aorta, and kidneys (16). In 2021, Ji et al. reported the role of USP41 in promoting lung cancer cell proliferation and migration (17). Until now, no data has been reported about the function of USP41 in cancer development, including BC (18). Moreover, the mechanism of USP41 in cancer progression remains unclear.In this study, we reported for the first time that USP41 was upregulated in BC and interpreted its possible signaling for BC as oncogene. We found that USP41 upregulation enhanced the growth, proliferation, and invasion of BC cells. The potential mechanism of USP41 in BC was also explored, and it was shown that receptor for activated C kinase 1 (RACK1)-related signaling may participate in this progression. Therapy targeting USP41 and RACK1 may provide a novel and promising approach to BC treatment.We present the following article in accordance with the MDAR reporting checklist (available at https://dx.doi.org/10.21037/atm-21-4921).
Methods
Clinical samples
We obtained BC specimens and paired adjacent normal breast tissue specimens from 10 patients with primary BC. All participants were female aged 45.7±12.50 and received no therapy before sample collection. The study was approved by an independent ethics committee of Fourth Military Medical University (KY20213157-1). The study was undertaken in accordance with the Good Clinical Practice guidelines and the Declaration of Helsinki (as revised in 2013). All participants were asked to provide written informed consent before enrollment. All tissues were collected immediately upon resection and transported in liquid nitrogen.
Cells, antibodies, and reagents
Human BC cell lines (MDA-MB-231, MCF-7) were obtained from American Type Culture Collection (ATCC; Rockville, MD, USA). The MDA-MB-231 cells were cultured in Dulbecco’s modified Eagle medium (DMEM) supplemented with 10% fetal bovine serum (FBS). The MCF-7 cells were grown in DMEM supplemented with 10% FBS. All the cells were cultured in a humidified atmosphere with 5% CO2 at 37 °C. RACK1 (Proteintech, USA, 1:1,000), USP41 (Invitrogen, USA, 1:1,000), β-actin (Servicebio, China, 1:1,000), goat anti-mouse IgG (1:5,000, Sigma-Aldrich, St. Louis, MO, USA) and GAPDH (Proteintech, USA, 1:1,000) were used for western blot.
The Cancer Genome Atlas (TCGA) database analyses
We used TCGA database (http://tcga-data.nci.nih.gov/tcga/) to investigate the expression of USP41 in BC. The BC patients were enrolled regardless of hormonal status and human epidermal growth factor receptor 2 (HER2) status. There were 1,104 cancer samples and 113 normal samples included. These participants had received chemotherapy, including adjuvant and neoadjuvant chemotherapy, but the specific regimen was unknown. The participants were segregated into “low” and “high” level of USP41 messenger RNA (mRNA) by median and we analyzed its relationship with survival.
Knockdown and overexpression assay
Knockdown assay was performed by transfecting the cells with siRNAs. siRNAs were obtained from HIPPOBIO (Huzhou, China). Lipofectamine® RNAiMAX Reagent (Invitrogen) was used to transfect the siRNAs in indicated cells, according to the manufacturers’ protocols. The sequences of siRNAs were as follow. siCtrl, 5'-UUCUCCGAACGUGUCACGU-3'; siUSP41#1, 5'-GGCUCAUCAGUGUCAGUACGU-3'; siUSP41#2, 5'-GCUCACCCUCCGACUUUCUUU-3'; siRACK1#1, 5'-CCAUGUUAUGGGAUCUCAA-3'; siRACK1#2, 5'-CCAACAGCAGCAACCCUAU-3'.Overexpression assay was performed by transfecting the cells with pCDH vectors. Negative controls cells were transfected with empty pCDH vectors. Overexpressed cells were transfected with pCDH vectors containing the coding sequence of indicated genes.
Cell proliferation analysis
Cell Counting Kit-8 (CCK-8) assay was performed to measure proliferation of BC cells according to manufacturer’s instructions. Briefly, 6,000 cells/well were seeded in 96-well plates in medium containing 10% FBS and incubated under 37 °C, 5% CO2. After treatment, 10 µL CCK-8 reagent was added and incubated for 1 h, the absorbance under 450 nm was measured with a microplate reader. The same experiments were repeated after a defined incubation period.
Colony formation assay
The different cells were seeded in 6 cm dishes at a density of 300 cells/dish. Following incubation for 2 weeks in a humidified incubator at 37 °C in an atmosphere of 95% air and 5% CO2, the cells were washed with phosphate-buffered saline (PBS), and colonies were fixed with methanol for 10 min and stained with 0.5% crystal violet for 15 min. The number of colonies was counted under a microscope (CKX53; Olympus, Tokyo, Japan). All experiments were performed in triplicate dishes in 3 independent experiments.
Transwell assay
Transwell migration assay was performed using Transwell inserts. In serum-free medium, 8 ×104 cells were seeded into the upper chamber of the insert and the bottom of the chamber contained the DMEM with 10% FBS. After 36 h incubation, the cells were fixed with methanol and stained with Giemsa. Then cells on the top surface of the membrane were wiped off, and cells on the lower surface were examined under an inverted light microscope. The number of migrated or invaded cells was quantified by counting the number of cells from 10 random fields at ×100 magnification.
Apoptosis assays
Additionally, cellular apoptosis was determined by flow cytometry (FAC). Cell lines cultured in DMEM supplemented with 10% FCS were seeded in 96-well plates (2×104 cells/well). After treatment with USP41 overexpression or knockdown, cellular apoptosis was determined by FAC after a stain with Annexin v-FITC or propidium iodide (PI) or both for 15 min in the dark at room temperature following the instructions of the Annexin v-FITC apoptosis detection kit.
Cell cycle analysis
Cell cycle distribution was analyzed using flow cytometric analysis. Briefly, after treatment with USP41 overexpression or knockdown, cells were harvested and fixed with precooled 75% (v/v) ethanol for 24 h. Afterwards, ethanol was discarded by centrifugation. Fibroblasts were rehydrated with PBS at room temperature and resuspended in PI DNA staining buffer and incubated for 30 min at room temperature in the dark. Detection was performed on a flow cytometer (FACSAria; Becton, Dickinson and Co. Biosciences, Franklin Lakes, NJ, USA).
RNA extraction and reverse transcription quantitative polymerase chain reaction
Total RNA was isolated from the cells and tissues using TRIzol reagent, according to the manufacturer’s instructions (Invitrogen, Carlsbad, CA, USA). Complementary DNA (cDNA) was generated from 1 µg total RNA using SuperScript III (Invitrogen, USA) and polyN primers. qPCRwas performed using the StepOne and StepOne Plus real-time PCR system (Applied Biosystems, Foster City, CA, USA). The relative levels of gene expression were represented as 2 –ΔΔCt. The experiments were repeated in triplicate. The sequence of indicated primers was listed as follow: USP41 forward, 5'-TGGAGGGCAGTATGAGCTTTTT-3', and reverse, 5'-ATGACCGGAGTCTGCCATTC-3'; RACK1 forward, 5'-CCACCACGAGGCGATTTGT-3', and reverse, 5'-CCCAGGGTATTCCATAGCTTGAT-3'; β-actin forward, 5'-CATGTACGTTGCTATCCAGGC-3', and reverse, 5'-CTCCTTAATGTCACGCACGAT-3'.
Western blot
Cells were homogenized and lysed with radioimmunoprecipitation assay (RIPA) lysis buffer [100 mM NaCl, 50 mM Tris-HCl pH 7.5, 1% TritonX-100, 1 mM ethylenediamine tetraacetic acid (EDTA), 10 mM b-glycerophosphate, 2 mM sodium vanadate and protease inhibitor]. Protein concentration was assayed using the micro-bicinchoninic acid (BCA) protein assay (Pierce, Rockford, IL, USA). A quantity of 40l g of protein per lane was separated by 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and electroblotted onto nitrocellulose (Amersham Pharmacia, Freiburg, Germany). Then, the membrane was blocked with 5% non-fat milk and incubated with antibodies against proteins. Incubation with the primary antibody was carried out overnight in a cold room. The membrane was then incubated with a secondary antibody conjugated to goat anti-mouse IgG (1:5,000, Sigma-Aldrich, St. Louis, MO, USA) and developed using enhanced chemiluminescence (ECL; Amersham Pharmacia, Piscataway, NJ, USA).
Co-immunoprecipitation and mass spectrometry
Co-immunoprecipitation and mass spectrometry (CoIP-MS) was used to explore the interacting proteins with USP41. The process consisted of 5 main steps: (I) incubation of cell lysates with antibodies, (II) binding of immune complexes to protein A/G agarose resin, (III) removal of non-interacting proteins, (IV) elution to obtain protein interacting complexes, (V) mass spectrometry identification of protein interacting complexes. The enriched co-immunoprecipitation products were analyzed by mass spectrometry. Peptides with scores b20 were removed, and higher scores meant a better degree of matching with the secondary atlas. Peptides were searched and compared qualitatively in UniProt (https://www.uniprot.org/). The UniquePep Count and the Cover Percent were also evaluated as auxiliary metrics for the final identification results.
Statistical analysis
The data were presented as means ± SD. Student’s t-test was used for statistical analysis, unless otherwise indicated. GraphPad Prism 8 (GraphPad Software Inc., La Jolla, CA, USA) and SPSS 23.0 Software (IBM Inc., Armonk, NY, USA) were used for all statistical analyses. Statistically significant differences were indicated when P<0.05.
Results
Overexpression of USP41 in BC cell lines and tissues
To investigate the role of USP41 in BC progression, we determined its expression in BC. Our TCGA database analysis revealed that in metastatic BC, USP41 expression was upregulated (). The overexpression of USP41 was negatively correlated with BC prognosis (). The protein levels of USP41 were higher in tumor tissues than their adjacent non-tumorous tissues in 10 pairs of clinical BC specimens ().
Figure 1
Overexpression of USP41 in BC. (A) Overexpression of USP41 in BC by TCGA database analysis. (B) Association of USP41 with BC prognosis by TCGA database analysis. (C) The protein levels of USP41 in clinical BC specimens (n=10) (P<0.05, Wilcoxon’s signed-rank test). USP41, ubiquitin-specific protease 41; N, non-tumorous tissues; C, breast cancer specimens; BC, breast cancer; TCGA, The Cancer Genome Atlas.
Overexpression of USP41 in BC. (A) Overexpression of USP41 in BC by TCGA database analysis. (B) Association of USP41 with BC prognosis by TCGA database analysis. (C) The protein levels of USP41 in clinical BC specimens (n=10) (P<0.05, Wilcoxon’s signed-rank test). USP41, ubiquitin-specific protease 41; N, non-tumorous tissues; C, breast cancer specimens; BC, breast cancer; TCGA, The Cancer Genome Atlas.
Establishment of stable USP41 expression in BC cell lines
To further explore the function of USP41, we used small interfering RNA (siRNA) to generate a stable cell line (MCF7 and MDA-MB-231 BC cells) in which USP41 was knocked down. We also established USP41 overexpression cell lines by transfecting MCF7 and MDA-MB-231 cells. Transfection efficiency was confirmed by western blot analysis and reverse transcription-quantitative polymerase chain reaction (RT-qPCR). Compared with the cells transfected with the control siRNA, the cells that had been transfected with the USP41 siRNA plasmid exhibited a significantly decreased expression of USP41 at both the protein and mRNA level (). On the contrary, the MCF7 and MDA-MB-231 BC cells that had been transfected with the USP41 overexpression plasmid exhibited obviously increased expression of USP41 at both the protein and mRNA level ().
Figure 2
Establishment of USP41 gene overexpression and knockdown. (A) Knockdown of USP41 mRNA level in MCF-7 and MDA-MB-231 cell line was assessed by RT-qPCR. (B) Protein levels of USP41 knockdown in MCF-7 and MDA-MB-231 BC cells. (C) Up-regulation of USP41 mRNA level in MCF-7 and MDA-MB-231 cell lines was assessed by RT-qPCR. (D) Protein levels of USP41 overexpression in MCF-7 and MDA-MB-231 BC cells. **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41; mRNA, messenger RNA; RT-qPCR, reverse transcription-quantitative polymerase chain reaction; BC, breast cancer.
Establishment of USP41 gene overexpression and knockdown. (A) Knockdown of USP41 mRNA level in MCF-7 and MDA-MB-231 cell line was assessed by RT-qPCR. (B) Protein levels of USP41 knockdown in MCF-7 and MDA-MB-231 BC cells. (C) Up-regulation of USP41 mRNA level in MCF-7 and MDA-MB-231 cell lines was assessed by RT-qPCR. (D) Protein levels of USP41 overexpression in MCF-7 and MDA-MB-231 BC cells. **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41; mRNA, messenger RNA; RT-qPCR, reverse transcription-quantitative polymerase chain reaction; BC, breast cancer.
Effects of USP41 gene on BC growth
The CCK-8 and colony formation assays were used to exam the effects of USP41 expression on BC cell proliferation. As shown in , knockdown of USP41 suppressed the proliferation of MCF-7 and MDA-MB-231 cells (). In contrast, the overexpression of USP41 significantly enhanced the proliferation of MCF-7 cells and MDA-MB-231 cells (). Knockdown of USP41 reduced the colony-forming ability of MCF 7 cells and MDA-MB-231 cells (), while overexpression of USP41 promoted the colony-forming ability of MCF-7 cells and MDA-MB-231 cells ().
Figure 3
Effects of USP41 gene on BC growth. (A) The results of CCK-8 assay that were conducted after USP41 knockdown in MCF-7 cells. (B) Cell proliferation after USP41 overexpression in MCF-7 cells was measured by CCK-8 assays. (C) Cell proliferation after USP41 knockdown in MDA-MB-231 cells. (D) The result of CCK-8 assay that were conducted after the overexpression of USP41 in MDA-MB-231 cell. (E) The result of colony formation assays that were conducted after USP41 knockdown in MCF7 and MDA-MB-231 cells. (F) The result of colony formation assays that were conducted after the overexpression of USP41 in MCF-7 and MDA-MB-231 cell. *, P>0.05, **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41; BC, breast cancer; CCK-8, Cell Counting Kit-8.
Effects of USP41 gene on BC growth. (A) The results of CCK-8 assay that were conducted after USP41 knockdown in MCF-7 cells. (B) Cell proliferation after USP41 overexpression in MCF-7 cells was measured by CCK-8 assays. (C) Cell proliferation after USP41 knockdown in MDA-MB-231 cells. (D) The result of CCK-8 assay that were conducted after the overexpression of USP41 in MDA-MB-231 cell. (E) The result of colony formation assays that were conducted after USP41 knockdown in MCF7 and MDA-MB-231 cells. (F) The result of colony formation assays that were conducted after the overexpression of USP41 in MCF-7 and MDA-MB-231 cell. *, P>0.05, **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41; BC, breast cancer; CCK-8, Cell Counting Kit-8.
Effects of USP41 gene on BC migration
Transwell assay indicated that USP41 inhibition inhibited the migration compared to control cells in MCF-7 cell line () and MDA-MB-231 cell line (). Meanwhile, the overexpression of USP41 enhanced cell invasion in MCF-7 cells (). Identically, USP41 overexpression promoted cell migration in MDA-MB-231 cell line ().
Figure 4
Effects of USP41 gene on BC migration. (A,B) Cell invasion analysis after USP41 knockdown in MCF-7 and MDA-MB-231 cells. (C,D) The result of cell invasion assay that was conducted after the overexpression of USP41 in MCF-7 and MDA-MB-231 cell. Transwell staining results are shown as a reference. ***, P<0.01. USP41, ubiquitin-specific protease 41.
Effects of USP41 gene on BC migration. (A,B) Cell invasion analysis after USP41 knockdown in MCF-7 and MDA-MB-231 cells. (C,D) The result of cell invasion assay that was conducted after the overexpression of USP41 in MCF-7 and MDA-MB-231 cell. Transwell staining results are shown as a reference. ***, P<0.01. USP41, ubiquitin-specific protease 41.
Effects of USP41 gene on BC cell cycle and apoptosis
We next confirmed the role of USP41 in BC cell cycle and apoptosis. As shown in , knockdown of USP41 enhanced cell apoptosis in MCF-7 and MDA-MB-231 cells. Cell cycle arrests of MCF-7 and MDA-MB-231 were also studied. It was shown that USP41 knockdown could arrest cells in G0/G1 phase ().
Figure 5
Effects of USP41 gene on BC cell cycle and apoptosis. (A,B) Cell apoptotic analysis after USP41 knockdown in MCF-7 and MDA-MB-231 cells. (C,D) The results of cell cycle assay that were conducted after the knockdown of USP41 in MCF-7 and MDA-MB-231 cell. **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41.
Effects of USP41 gene on BC cell cycle and apoptosis. (A,B) Cell apoptotic analysis after USP41 knockdown in MCF-7 and MDA-MB-231 cells. (C,D) The results of cell cycle assay that were conducted after the knockdown of USP41 in MCF-7 and MDA-MB-231 cell. **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41.
USP41 interacted with RACK1 in BC cells
Study of protein-protein interactions (PPIs) is an essential process to understand the biological functions of proteins and its underlying mechanism (19). Here, we performed CoIP-MS to discover novel proteins interacting with USP41. The CoIP-MS analyses identified a list of genes that interacted with USP41, including RACK1. The Co-IP results indicated that USP41 could interact with RACK1 (). Immunoblotting results showed that USP41 promoted the protein expression of RACK1 (). We also found the overexpression of RACK1 in BC tissues, compared with those in the adjacent normal tissue samples (). Next, we inhibited the expression of RACK1 by gene knockdown (). Colony-forming assay demonstrated that knockdown of RACK1 reduced the colony-forming ability of BC cells (). Transwell assay indicated that knockdown of RACK1 inhibited the migration compared to control cells ().
Figure 6
USP41 combined with RACK1 in BC cell. (A) Co-IP assay was performed in USP41-Flag overexpressing cells. (B) Immunoblotting analysis of RACK1 in USP41 overexpressing and knockdown cells. (C) Immunoblotting analysis of RACK1 in BC and normal tissues. (D) The mRNA level of RACK1 after gene knockdown. (E,F) Effects of RACK1 knockdown on BC cell colony formation. (G) Effects of RACK1 knockdown on BC cell migration. Transwell staining results are shown as a reference. **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41; RACK1, receptor for activated C kinase 1; BC, breast cancer; Co-IP, co-immunoprecipitation; mRNA, messenger RNA.
USP41 combined with RACK1 in BC cell. (A) Co-IP assay was performed in USP41-Flag overexpressing cells. (B) Immunoblotting analysis of RACK1 in USP41 overexpressing and knockdown cells. (C) Immunoblotting analysis of RACK1 in BC and normal tissues. (D) The mRNA level of RACK1 after gene knockdown. (E,F) Effects of RACK1 knockdown on BC cell colony formation. (G) Effects of RACK1 knockdown on BC cell migration. Transwell staining results are shown as a reference. **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41; RACK1, receptor for activated C kinase 1; BC, breast cancer; Co-IP, co-immunoprecipitation; mRNA, messenger RNA.
Knockdown of RACK1 reversed the oncogenic function of USP41 in BC cells.
At last, we knocked down RACK1 in USP41 overexpressed BC cells (). When USP41 overexpression significantly promoted the proliferation, colony formation, and cell invasion of MCF-7 and MDA-MB-231 cells, knockdown of RACK1 could obviously reduce the growth and invasion ability (). Thus, USP41 promoted BC function through upregulating RACK1.
Figure 7
USP41 promoted BC cell growth and invasion through upregulation of RACK1. (A) The mRNA level of RACK1 was checked in Ctrl, USP41, and USP41+siRACK1 MCF-7 and MDA-MB-231 cells. (B) CCK-8 assay was performed to analyze cell proliferation in Ctrl, USP41, and USP41+siRACK1 MCF-7 and MDA-MB-231 cells. (C) Colony formation assay was performed in Ctrl, USP41, and USP41+siRACK1 MCF-7 and MDA-MB-231 cells. (D) Transwell analysis of cell invasion was performed in Ctrl, USP41, and USP41+siRACK1 MCF-7 and MDA-MB-231 cells. Transwell staining results are shown as a reference. **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41; RACK1, receptor for activated C kinase 1; BC, breast cancer; mRNA, messenger RNA; CCK-8, Cell Counting Kit-8.
USP41 promoted BC cell growth and invasion through upregulation of RACK1. (A) The mRNA level of RACK1 was checked in Ctrl, USP41, and USP41+siRACK1 MCF-7 and MDA-MB-231 cells. (B) CCK-8 assay was performed to analyze cell proliferation in Ctrl, USP41, and USP41+siRACK1 MCF-7 and MDA-MB-231 cells. (C) Colony formation assay was performed in Ctrl, USP41, and USP41+siRACK1 MCF-7 and MDA-MB-231 cells. (D) Transwell analysis of cell invasion was performed in Ctrl, USP41, and USP41+siRACK1 MCF-7 and MDA-MB-231 cells. Transwell staining results are shown as a reference. **, P<0.05; ***, P<0.01. USP41, ubiquitin-specific protease 41; RACK1, receptor for activated C kinase 1; BC, breast cancer; mRNA, messenger RNA; CCK-8, Cell Counting Kit-8.
Discussion
The USPs are emerging as potential therapeutic targets in many diseases. In BC, several USPs were overexpressed, such as USP9X, USP15, USP32, USP9Y, USP10, USP25, USP4, and USP11 (20). In 2016, Li et al. showed that USP4 could inhibit BC cell growth through the upregulation of PDCD4 (21). Both USP14 and USP21 were also involved in the progression of BC (22,23). In 2018, USP2-69 was found over-expressed in breast invasive ductal carcinoma, and was closely related to proliferation promoting effects (24). Qiu et al. demonstrated that USP8 might predict better clinical characteristics and might be a protective factor for patients with BC (25). In 2020, USP8 was proved as a positive regulator of Notch signaling, offering a therapeutic target for BC (26). Pal et al. claimed that targeting USPs as BC treatment is especially promising (27). However, no results have been reported for USP41 in BC, even in tumors. In this study, USP41 was found overexpressed in BC and shown to be associated with the cancer progression for the first time.A member of the tryptophan-aspartate-40 (WD-40) family of proteins, RACK1 is an evolutionarily conserved a 36 kDa scaffold protein with 7 WD-40 repeats, containing the subunit of G-proteins (28,29). The WD40 repeats of RACK1 provides the complex protein-protein bio-interactions among signaling molecules such as integrins, phosphodiesterase 4D5, and Src tyrosine kinase, as well as protein kinase C (PKC) (30). It seems that RACK1 is essential for cellular functions because its amino acid sequence in human is 100% consistent with that in rats, chickens, mice, and cows (31). As reported, RACK1 can interact with numerous signaling proteins and is regarded as a scaffolding, anchor, or adaptor protein, participating into multiple intracellular signal transduction, immune defense, cell growth, and migration pathways (32). In 2018, RACK1 was verified as an oncogene in colon cancer (33). In 2020, RACK1 overexpression was demonstrated to dampen the progression of cervical squamous cell carcinoma (34). Wu et al. showed that RACK1 stimulates tumor invasion and lymph node metastasis of cervical cancer, providing promising means for cervical cancer treatment (35). Dan et al. found that RACK1 promotes cancer progression by increasing the M2/M1 macrophage ratio in oral squamous cell carcinoma (36). For BC, RACK1 was firstly identified as a superior independent biomarker for diagnosis and prognosis in 2010. Comparing with conventional diagnostic index [Ki67, estrogen receptor (ER), progesterone receptor (PR) and HER-2] in BC, RACK1 possessed superiority in sensitivity and specificity as biomarker (37). In this study, we also found the overexpression of RACK1 in BC and its potential role in proliferation and migration. However, the mechanisms through which RACK1 regulates BC progression are still undeterminedThe USPs-regulated signaling pathways implicated in BC are more likely to be transforming growth factor beta (TGF-β) signaling, which has a well-documented role in mediating epithelial-to-mesenchymal transition (EMT), tumor progression, and metastasis (20). In 2012, USP11 was found to augment TGF-β signaling by deubiquitylating ALK5 (38). Eichhorn et al. demonstrated that USP15 stabilized TGF-β receptor I and promoted oncogenesis through the activation of TGF-β signaling (39). In 2019, Zhang et al. showed that USP4 inhibition prevented the activity of the TGF-β/Smad signaling pathway (40). Galant et al. found that overexpression of several USPs amplifies fibrotic responses induced by TGF-β (41). In this study, USP41 was found to be associated with RACK1 and RACK1 has been identified as concomitant regulator of TGF-β1 (42). Zhou et al. indicated that RACK1 can inhibit collagen synthesis in KFs via inhibition of the TGF-β1/Smad signaling pathway (43). Silencing of RACK1was shown to attenuate renal fibrosis by inhibiting TGF-β signaling (44). Above all, USP41 may exert an oncogenic function via TGF-β signaling in combination with RACK1. However, the mechanisms through which RACK1 regulates BC are wide ranging and diverse. Further study is still needed to explore its role in USP41 mediated BC progression.In conclusion, USP41 overexpression promotes the proliferation and invasion of BC by combination with RACK1, which may serve as an emerging therapeutic potential target for BC treatment.The article’s supplementary files as
Authors: Christine Galant; Joel Marchandise; Maria S Stoenoiu; Julie Ducreux; Aurélie De Groof; Sophie Pirenne; Benoit Van den Eynde; Frédéric A Houssiau; Bernard R Lauwerys Journal: Rheumatology (Oxford) Date: 2019-04-01 Impact factor: 7.580