Literature DB >> 34790380

Comprehensive bioinformatics analyses identified Homeobox B9 as a potential prognostic biomarker and therapeutic target for gastric cancer.

Xiaofei Li1, Shujia Chen1, Yinghui Zhu1, Jiayue Fei1, Liaoyuan Song1, Guoyan Sun1, Wei Niu1, Lianyi Guo1, Jiwei Wang2.   

Abstract

BACKGROUND: The Homeobox B (HOXB) family promotes tumor progression, but the mechanism of its action in gastric cancer (GC) is unclear. We sought to identify the HOXB family members that are critical to the prognosis of GC patients.
METHODS: The Oncomine, Gene Expression Profiling Interactive Analysis (GEPIA), cBioPortal, UALCAN, Kaplan-Meier plotter, and the GeneMANIA databases were used to analyze the messenger RNA (mRNA) expression levels, prognostic value, and gene-gene interaction network of the HOXB9 family members in GC. The expression of HOXB9 in GC and its relationship with various clinicopathological parameters and the prognosis of patients were verified by immunohistochemistry.
RESULTS: The expression of HOXB3, HOXB5, HOXB6, HOXB7, HOXB9, and HOXB13 mRNA was significantly upregulated in GC. There was a significant correlation between the upregulation of HOXB3, HOXB5, and HOXB9 mRNA and a low overall survival (OS) rate. The high expression of HOXB7, HOXB9, and HOXB13 mRNA was closely correlated to tumor grade and stage. HOXB9 was the HOXB family member most closely related to the occurrence and development of GC. A further analysis showed that HOXB9 might be involved in deoxyribonucleic acid repair and division regulation. A validation study showed that the advanced cancer group had a higher level of HOXB9 expression than the early cancer group. The high expression of HOXB9 in gastric tissue plays an important role in the survival and prognosis of GC patients.
CONCLUSIONS: HOXB family members have different degrees of abnormal expression in GC. High HOXB9 expression in GC tissues was significantly correlated with a worse prognosis. Thus, HOXB9 is a potential novel biomarker and therapeutic target for GC. 2021 Journal of Gastrointestinal Oncology. All rights reserved.

Entities:  

Keywords:  Gastric cancer (GC); Homeobox B family (HOXB family); Homeobox B9 (HOXB9); prognosis biomarker; therapeutic target

Year:  2021        PMID: 34790380      PMCID: PMC8576221          DOI: 10.21037/jgo-21-598

Source DB:  PubMed          Journal:  J Gastrointest Oncol        ISSN: 2078-6891


  54 in total

1.  Homeobox B9 induces epithelial-to-mesenchymal transition-associated radioresistance by accelerating DNA damage responses.

Authors:  Naokazu Chiba; Valentine Comaills; Bunsyo Shiotani; Fumiyuki Takahashi; Toshiyuki Shimada; Ken Tajima; Daniel Winokur; Tetsu Hayashida; Henning Willers; Elena Brachtel; Maria D M Vivanco; Daniel A Haber; Lee Zou; Shyamala Maheswaran
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

2.  Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles.

Authors:  Daniel R Rhodes; Shanker Kalyana-Sundaram; Vasudeva Mahavisno; Radhika Varambally; Jianjun Yu; Benjamin B Briggs; Terrence R Barrette; Matthew J Anstet; Colleen Kincead-Beal; Prakash Kulkarni; Sooryanaryana Varambally; Debashis Ghosh; Arul M Chinnaiyan
Journal:  Neoplasia       Date:  2007-02       Impact factor: 5.715

3.  HoxB5 induces endothelial sprouting in vitro and modifies intussusceptive angiogenesis in vivo involving angiopoietin-2.

Authors:  Stephan Winnik; Mei Klinkert; Haymo Kurz; Christoph Zoeller; Jennifer Heinke; Yaxu Wu; Christoph Bode; Cam Patterson; Martin Moser
Journal:  Cardiovasc Res       Date:  2009-04-29       Impact factor: 10.787

4.  Retinoic acid receptor antagonists inhibit miR-10a expression and block metastatic behavior of pancreatic cancer.

Authors:  Frank Ulrich Weiss; Ines J Marques; Joost M Woltering; Danielle H Vlecken; Ali Aghdassi; Lars Ivo Partecke; Claus-Dieter Heidecke; Markus M Lerch; Christoph P Bagowski
Journal:  Gastroenterology       Date:  2009-09-10       Impact factor: 22.682

5.  An integrated transcriptomic and computational analysis for biomarker identification in gastric cancer.

Authors:  Juan Cui; Yunbo Chen; Wen-Chi Chou; Liankun Sun; Li Chen; Jian Suo; Zhaohui Ni; Ming Zhang; Xiaoxia Kong; Lisabeth L Hoffman; Jinsong Kang; Yingying Su; Victor Olman; Darryl Johnson; Daniel W Tench; I Jonathan Amster; Ron Orlando; David Puett; Fan Li; Ying Xu
Journal:  Nucleic Acids Res       Date:  2010-10-21       Impact factor: 16.971

6.  Sustained endothelial expression of HoxA5 in vivo impairs pathological angiogenesis and tumor progression.

Authors:  Ileana Cuevas; Hans Layman; Lisa Coussens; Nancy Boudreau
Journal:  PLoS One       Date:  2015-03-30       Impact factor: 3.240

7.  GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses.

Authors:  Zefang Tang; Chenwei Li; Boxi Kang; Ge Gao; Cheng Li; Zemin Zhang
Journal:  Nucleic Acids Res       Date:  2017-07-03       Impact factor: 16.971

8.  HOXB8 enhances the proliferation and metastasis of colorectal cancer cells by promoting EMT via STAT3 activation.

Authors:  Tingting Wang; Feiyan Lin; Xuecheng Sun; Lei Jiang; Ruibo Mao; Shenyue Zhou; Wenjing Shang; Ruichun Bi; Fengying Lu; Shaotang Li
Journal:  Cancer Cell Int       Date:  2019-01-03       Impact factor: 5.722

9.  Hepatoid adenocarcinoma of the stomach: a unique subgroup with distinct clinicopathological and molecular features.

Authors:  Yakun Wang; Li Sun; Zhongwu Li; Jing Gao; Sai Ge; Cheng Zhang; Jiajia Yuan; Xicheng Wang; Jian Li; Zhihao Lu; Jifang Gong; Ming Lu; Jun Zhou; Zhi Peng; Lin Shen; Xiaotian Zhang
Journal:  Gastric Cancer       Date:  2019-04-15       Impact factor: 7.370

Review 10.  Methylation in HOX Clusters and Its Applications in Cancer Therapy.

Authors:  Ana Paço; Simone Aparecida de Bessa Garcia; Renata Freitas
Journal:  Cells       Date:  2020-07-03       Impact factor: 6.600

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