| Literature DB >> 34786572 |
Elani A Bykowski1,2, Jamie N Petersson1,2,3, Sean Dukelow4,5, Chester Ho6, Chantel T Debert4,5, Tony Montina2,3, Gerlinde A S Metz1,2.
Abstract
BACKGROUND: Analysis of fluid metabolites has the potential to provide insight into the neuropathophysiology of injury in patients with traumatic brain injury (TBI).Entities:
Keywords: Biomarkers; Concussion; Functional recovery; Metabolic biomarkers; Metabolomics; NMR spectroscopy; Rehabilitation; Traumatic brain injury
Year: 2021 PMID: 34786572 PMCID: PMC8578034 DOI: 10.1016/j.ibneur.2021.10.003
Source DB: PubMed Journal: IBRO Neurosci Rep ISSN: 2667-2421
Patient characteristics (n = 8 males) indicating age, initial Glasgow Coma Scale score, TBI type, comorbidities, medication use, and both the initial and 6 months post-injury Montreal Cognitive Assessment (MoCA) and Functional Independence Measure (FIM) scores.
| Patient Code | Age | Glasgow Coma Scale Score | TBI Type | Co-Morbidities | Medication Use | Initial MoCA Score | 6 Months MoCA Score | Initial FIM Score | 6 Months FIM Score |
|---|---|---|---|---|---|---|---|---|---|
| 18 | 3 | Frontal | Injury to right ear, right petrous temporal bone fracture | Tylenol | 25 | 30 | 126 | 126 | |
| 49 | 10 | Frontal | Depression, asthma, EtOH abuse | Ducosate, sodium, fentanyl, lorazepam, phenytoin, senokot, thiomine, tobradex, multi-vits | 23 | 26 | 113 | 122 | |
| 18 | 6 | SDH | None | None | 26 | 27 | 124 | 125 | |
| 64 | 13 | DAI- Left | Multiple face lacerations, nasal fracture, liver laceration, dental injuries | Acetaminophen, ducusate sodium, heparin, quetiapine | 20 | 27 | 112 | 121 | |
| 46 | 8 | SDH/SAH bifrontal | None | Trazadone, testosterone, seroquel | 25 | 26 | 113 | 124 | |
| 68 | 15 | SDH/SAH | Chronic lower back pain, liver laceration, bilateral shoulder injuries, torn right rotator cuff | None | 21 | 23 | 126 | 123 | |
| 48 | 14 | SDH/SAH | None | Tylenol | 27 | 27 | 124 | 126 | |
| 48 | 12 | SAH- right frontal | L2, L4, L5 fracture, sciatic nerve damage, eczema, history of smoking | Tylenol, Baclofen, Pantoprazole | 23 | 23 | 115 | 122 |
Abbreviations: SDH = subdural hematoma, SAH = subarachnoid hemorrhage, DAI = diffuse axonal injury, MoCA = Montreal Cognitive Assessment, FIM = Functional Independence Measure.
Pearson R values and associated p-values in n = 8 males for the change in metabolites (6 month post-injury concentration – initial concentration) correlated to the Glasgow Coma Scale score. Reported metabolites are significant based on the Bonferroni corrected threshold (alpha < 0.001).
| Metabolite | Δ Metabolites to initial injury severity (GCS) |
|---|---|
| Homovanillate | R = −0.74, |
Fig. 1(A) Principal Components Analysis (PCA) and (B) Orthogonal Projections to Latent Structures Discriminant Analysis (OPLS-DA) scores plots for n = 8 males. This analysis was carried out using a list of urinary metabolites found to be statistically significant by either paired t-test/Wilcoxon Mann-Whitney or VIAVC testing. The 95% confidence interval is indicated by the shaded ellipses. In the case of the PCA scores plots the x- and y-axis show the data variance explained by principle components 1 and 2, respectively. In the case of the OPLS-DA scores plot the x- and y-axis show the predictive (between group) and orthogonal (within group) variation, respectively. The numbers represent the patient code for each individual sample. The following are the cross-validation and permutation measures for the OPLS-DA figure: R2Y = 0.959 (p < 0.0005), Q2 = 0.785 (p < 0.0005).
Fig. 2Receiver Operator Characteristic (ROC) curve for n = 8 males. The corresponding area under the curve (AUC) and confidence interval are indicated. The ROC curve was constructed using the metabolites determined to be significantly altered based on the VIAVC best subset which corresponds to 27 bins. The predictive accuracy was 99.7% when all bins from the best subset were included.
Fig. 3Metabolic Pathway Analysis; a higher value on the y-axis indicates a lower p-value for the pathway and the x-axis provides the pathway impact, which is a measure of how affected each pathway is by the metabolites identified as significantly altered. The color of each circle is an indication if the p-value, with darker colors being more significant. The size of the circle is proportional to the pathways impact factor. Only pathways with a p-value less than 0.05, represented by the dotted line, are labeled. This analysis was carried out using the list of metabolites that were identified to be significantly altered by the paired t-test/Mann-Whitney test or the VIAVC best subset. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)