Literature DB >> 34784504

Beyond t test and ANOVA: applications of mixed-effects models for more rigorous statistical analysis in neuroscience research.

Zhaoxia Yu1, Michele Guindani2, Steven F Grieco3, Lujia Chen3, Todd C Holmes4, Xiangmin Xu5.   

Abstract

In basic neuroscience research, data are often clustered or collected with repeated measures, hence correlated. The most widely used methods such as t test and ANOVA do not take data dependence into account and thus are often misused. This Primer introduces linear and generalized mixed-effects models that consider data dependence and provides clear instruction on how to recognize when they are needed and how to apply them. The appropriate use of mixed-effects models will help researchers improve their experimental design and will lead to data analyses with greater validity and higher reproducibility of the experimental findings.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Bayesian analysis; clustered data; generalized linear mixed-effects model; linear mixed-effects model; linear regression model; repeated measures

Mesh:

Year:  2021        PMID: 34784504      PMCID: PMC8763600          DOI: 10.1016/j.neuron.2021.10.030

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   18.688


  27 in total

1.  Use of the Mann-Whitney U-test for clustered data.

Authors:  B Rosner; D Grove
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2.  A study of clustered data and approaches to its analysis.

Authors:  Sally Galbraith; James A Daniel; Bryce Vissel
Journal:  J Neurosci       Date:  2010-08-11       Impact factor: 6.167

3.  Believe it or not: how much can we rely on published data on potential drug targets?

Authors:  Florian Prinz; Thomas Schlange; Khusru Asadullah
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Review 4.  Voodoo Correlations Are Everywhere-Not Only in Neuroscience.

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5.  A solution to dependency: using multilevel analysis to accommodate nested data.

Authors:  Emmeke Aarts; Matthijs Verhage; Jesse V Veenvliet; Conor V Dolan; Sophie van der Sluis
Journal:  Nat Neurosci       Date:  2014-03-26       Impact factor: 24.884

6.  Models for longitudinal data: a generalized estimating equation approach.

Authors:  S L Zeger; K Y Liang; P S Albert
Journal:  Biometrics       Date:  1988-12       Impact factor: 2.571

7.  Subanesthetic Ketamine Reactivates Adult Cortical Plasticity to Restore Vision from Amblyopia.

Authors:  Steven F Grieco; Xin Qiao; Xiaoting Zheng; Yongjun Liu; Lujia Chen; Hai Zhang; Zhaoxia Yu; Jeffrey P Gavornik; Cary Lai; Sunil P Gandhi; Todd C Holmes; Xiangmin Xu
Journal:  Curr Biol       Date:  2020-08-20       Impact factor: 10.834

8.  Random-effects models for longitudinal data.

Authors:  N M Laird; J H Ware
Journal:  Biometrics       Date:  1982-12       Impact factor: 2.571

9.  Biomedical research: increasing value, reducing waste.

Authors:  Malcolm R Macleod; Susan Michie; Ian Roberts; Ulrich Dirnagl; Iain Chalmers; John P A Ioannidis; Rustam Al-Shahi Salman; An-Wen Chan; Paul Glasziou
Journal:  Lancet       Date:  2014-01-08       Impact factor: 79.321

10.  The National Institutes of Health's Big Data to Knowledge (BD2K) initiative: capitalizing on biomedical big data.

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Journal:  J Am Med Inform Assoc       Date:  2014-07-09       Impact factor: 4.497

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  17 in total

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Authors:  Elizabeth L Johnson; Qin Yin; Nolan B O'Hara; Lingfei Tang; Jeong-Won Jeong; Eishi Asano; Noa Ofen
Journal:  Curr Biol       Date:  2022-02-15       Impact factor: 10.834

2.  Amphetamine alters an EEG marker of reward processing in humans and mice.

Authors:  James F Cavanagh; Sarah L Olguin; Jo A Talledo; Juliana E Kotz; Benjamin Z Roberts; John A Nungaray; Joyce Sprock; David Gregg; Savita G Bhakta; Gregory A Light; Neal R Swerdlow; Jared W Young; Jonathan L Brigman
Journal:  Psychopharmacology (Berl)       Date:  2022-02-08       Impact factor: 4.530

3.  In vitro longitudinal lumbar spinal cord preparations to study sensory and recurrent motor microcircuits of juvenile mice.

Authors:  Mustafa Görkem Özyurt; Julia Ojeda-Alonso; Marco Beato; Filipe Nascimento
Journal:  J Neurophysiol       Date:  2022-08-10       Impact factor: 2.974

4.  Single-cell epigenome analysis reveals age-associated decay of heterochromatin domains in excitatory neurons in the mouse brain.

Authors:  Yanxiao Zhang; Maria Luisa Amaral; Chenxu Zhu; Steven Francis Grieco; Xiaomeng Hou; Lin Lin; Justin Buchanan; Liqi Tong; Sebastian Preissl; Xiangmin Xu; Bing Ren
Journal:  Cell Res       Date:  2022-10-07       Impact factor: 46.297

5.  GluN2B inhibition confers resilience against long-term cocaine-induced neurocognitive sequelae.

Authors:  Dan C Li; Elizabeth G Pitts; Niharika M Dighe; Shannon L Gourley
Journal:  Neuropsychopharmacology       Date:  2022-09-02       Impact factor: 8.294

6.  LFP Analysis of Brain Injured Anesthetized Animals Undergoing Closed-Loop Intracortical Stimulation.

Authors:  Alberto Averna; Federico Barban; Marta Care; Maxwell D Murphy; Riccardo Iandolo; Lorenzo De Michieli; Randolph J Nudo; David J Guggenmos; Michela Chiappalone
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2022-06-02       Impact factor: 4.528

7.  Genome Sequencing Variations in the Octodon degus, an Unconventional Natural Model of Aging and Alzheimer's Disease.

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8.  Validation of At-Home Application of a Digital Cognitive Screener for Older Adults.

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Review 9.  Interaction effect: Are you doing the right thing?

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