| Literature DB >> 34765542 |
Yubizhuo Wang1,2, Jiayuan Shao3, Pan Wang2, Lintao Chen1, Mingliang Ying4, Siyuan Chai5, Shijian Ruan6, Wuwei Tian6, Yongna Cheng1, Hongbin Zhang1, Xiuming Zhang7, Xiangming Wang1, Yong Ding6, Wenjie Liang2, Liming Wu5.
Abstract
BACKGROUND: Our aim was to establish a deep learning radiomics method to preoperatively evaluate regional lymph node (LN) staging for hilar cholangiocarcinoma (HC) patients. METHODS AND MATERIALS: Of the 179 enrolled HC patients, 90 were pathologically diagnosed with lymph node metastasis. Quantitative radiomic features and deep learning features were extracted. An LN metastasis status classifier was developed through integrating support vector machine, high-performance deep learning radiomics signature, and three clinical characteristics. An LN metastasis stratification classifier (N1 vs. N2) was also proposed with subgroup analysis.Entities:
Keywords: computed tomography; deep learning; hilar cholangiocarcinoma; lymph node; radiomics
Year: 2021 PMID: 34765542 PMCID: PMC8576333 DOI: 10.3389/fonc.2021.721460
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Flowchart of this two-center study.
Figure 2Workflow of feature extraction in hilar cholangiocarcinoma (HC) patients.
Clinical characteristics of patients with hilar cholangiocarcinoma (HC) in different datasets.
| Clinical characteristic | All patients ( | Training cohort ( | External test cohort ( |
|
|---|---|---|---|---|
|
| 0.475 | |||
| Male | 110 | 99 (63%) | 11 (52%) | |
| Female | 69 | 59 (37%) | 10 (48%) | |
|
| 61.7 ± 8.9 | 61.3 ± 9.0 | 64.6 ± 7.2 | 0.566 |
|
| 2.4 ± 0.9 | 2.4 ± 1.0 | 1.9 ± 0.6 | 0.055 |
|
| <0.001 | |||
| Positive | 69 | 49 (31%) | 20 (95%) | |
| Negative | 110 | 109 (69%) | 1 (5%) | |
|
| 0.428 | |||
| Positive | 133 | 119 (75%) | 14 (67%) | |
| Negative | 46 | 39 (25%) | 7 (33%) | |
|
| 0.815 | |||
| I/II | 103 | 90 (57%) | 13 (62%) | |
| III/IV | 76 | 68 (43%) | 8 (38%) | |
|
| 0.593 | |||
| Positive | 43 | 37 (23%) | 6 (29%) | |
| Negative | 136 | 121 (77%) | 15 (71%) | |
|
| 0.496 | |||
| Positive | 90 | 81 (51%) | 9 (43%) | |
| Negative | 89 | 77 (49%) | 12 (57%) |
Six patients were not included because of incomplete clinical data. The threshold values for distinguishing the levels (positive or negative) of CEA and CA 19-9 were 5.0 ng/ml and 37.0 U/ml, respectively. The statistical results of continuous variables were obtained based on a two-sided Mann–Whitney U test. The statistical results of categorical variables were acquired using a two-sided chi-squared test.
CEA, preoperative plasma carcinoembryonic antigen; CA 19-9, carbohydrate antigen 19-9; LN, lymph node; CT, computed tomography.
Figure 3Deep learning radiomics nomograms and evaluation of the proposed classifiers. (A) Evaluation of five convolutional neural network (CNN) structures in the internal validation cohort, in which CancerNet showed optimal performance. (B) Receiver operating characteristics (ROCs) of the support vector machine (SVM)-based deep learning radiomics signature (DLRS) in the construction of the lymph node (LN) metastasis status classifier. Areas under the ROC curve (AUCs) are listed in the lower right corner. (C) Calibration curves of DLRS indicating that the predicted outcomes coordinated well with the real LN status. (D) ROCs of the fusion model integrating DLRS, the carbohydrate antigen 19-9 (CA 19-9) level, the carcinoembryonic antigen (CEA) level, and the computed tomography (CT)-reported LN status. (E) Decision curve analysis (DCA) showing that the fusion model is optimal for LN metastasis status assessment. (F) Deep learning radiomics nomogram based on the DLRS score, CEA level, CA 19-9 level, and the CT-reported LN status. (G) ROCs of the LN metastasis stratification classifier.
More assessment criteria for the deep learning radiomics signature (DLRS) and the fusion model predicting the status of lymph node (LN) metastasis.
| Model | Cohort | Criterion | |||
|---|---|---|---|---|---|
| Recall | Precision | F1 score | Accuracy | ||
| DLRS | Training | 0.766 | 0.740 | 0.753 | 0.752 |
| External test | 0.778 | 0.778 | 0.778 | 0.810 | |
| Fusion model | Training | 0.806 | 0.754 | 0.779 | 0.770 |
| External test | 0.667 | 0.857 | 0.750 | 0.810 | |
Each criterion of the training cohort was obtained by averaging the criterion values fivefold.