Literature DB >> 34748284

CRISPR-Cas9 Genome Editing of Primary Human Vascular Cells In Vitro.

Deepak S Atri1,2, Vivian S Lee-Kim1,2, Shamsudheen K Vellarikkal1,2, Oscar Sias-Garcia1,2, Mounica Yanamandala1,2, Gavin R Schniztler1,2, Rajat M Gupta1,2.   

Abstract

Genome editing of primary human cells with CRISPR-Cas9 is a powerful tool to study gene function. For many cell types, there are efficient protocols for editing with optimized plasmids for Cas9 and sgRNA expression. Vascular cells, however, remain refractory to plasmid-based delivery of CRISPR machinery for in vitro genome editing due to low transfection efficiency, poor expression of the Cas9 machinery, and toxic effects of the selection antibiotics. Here, we describe a method for high-efficiency editing of primary human vascular cells in vitro using nucleofection for direct delivery of sgRNA:Cas9-NLS ribonucleoprotein complexes. This method is more rapid and its high editing efficiency eliminates the need for additional selection steps. The edited cells can be employed in diverse applications, such as gene expression measurement or functional assays to assess various genetic perturbation effects in vitro. This method proves effective in vascular cells that are refractory to standard genome manipulation techniques using viral plasmid delivery. We anticipate that this technique will be applied to other non-vascular cell types that face similar barriers to efficient genome editing.
© 2021 Wiley Periodicals LLC. Basic Protocol: CRISPR-Cas9 genome editing of primary human vascular cells in vitro. © 2021 Wiley Periodicals LLC.

Entities:  

Keywords:  CRISPR; Cas9; endothelial cells; genome editing; vascular smooth muscle cells

Mesh:

Year:  2021        PMID: 34748284      PMCID: PMC8580244          DOI: 10.1002/cpz1.291

Source DB:  PubMed          Journal:  Curr Protoc        ISSN: 2691-1299


  6 in total

1.  CRISPR-Cas9 Gene Editing for Sickle Cell Disease and β-Thalassemia.

Authors:  Haydar Frangoul; David Altshuler; M Domenica Cappellini; Yi-Shan Chen; Jennifer Domm; Brenda K Eustace; Juergen Foell; Josu de la Fuente; Stephan Grupp; Rupert Handgretinger; Tony W Ho; Antonis Kattamis; Andrew Kernytsky; Julie Lekstrom-Himes; Amanda M Li; Franco Locatelli; Markus Y Mapara; Mariane de Montalembert; Damiano Rondelli; Akshay Sharma; Sujit Sheth; Sandeep Soni; Martin H Steinberg; Donna Wall; Angela Yen; Selim Corbacioglu
Journal:  N Engl J Med       Date:  2020-12-05       Impact factor: 91.245

2.  DNA targeting specificity of RNA-guided Cas9 nucleases.

Authors:  Patrick D Hsu; David A Scott; Joshua A Weinstein; F Ann Ran; Silvana Konermann; Vineeta Agarwala; Yinqing Li; Eli J Fine; Xuebing Wu; Ophir Shalem; Thomas J Cradick; Luciano A Marraffini; Gang Bao; Feng Zhang
Journal:  Nat Biotechnol       Date:  2013-07-21       Impact factor: 54.908

3.  Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9.

Authors:  John G Doench; Nicolo Fusi; Meagan Sullender; Mudra Hegde; Emma W Vaimberg; Jennifer Listgarten; Katherine F Donovan; Ian Smith; Zuzana Tothova; Craig Wilen; Robert Orchard; Herbert W Virgin; David E Root
Journal:  Nat Biotechnol       Date:  2016-01-18       Impact factor: 54.908

4.  CRISPR-Cas9 In Vivo Gene Editing for Transthyretin Amyloidosis.

Authors:  Julian D Gillmore; Ed Gane; Jorg Taubel; Justin Kao; Marianna Fontana; Michael L Maitland; Jessica Seitzer; Daniel O'Connell; Kathryn R Walsh; Kristy Wood; Jonathan Phillips; Yuanxin Xu; Adam Amaral; Adam P Boyd; Jeffrey E Cehelsky; Mark D McKee; Andrew Schiermeier; Olivier Harari; Andrew Murphy; Christos A Kyratsous; Brian Zambrowicz; Randy Soltys; David E Gutstein; John Leonard; Laura Sepp-Lorenzino; David Lebwohl
Journal:  N Engl J Med       Date:  2021-06-26       Impact factor: 91.245

5.  Easy quantitative assessment of genome editing by sequence trace decomposition.

Authors:  Eva K Brinkman; Tao Chen; Mario Amendola; Bas van Steensel
Journal:  Nucleic Acids Res       Date:  2014-10-09       Impact factor: 16.971

6.  Inherited causes of clonal haematopoiesis in 97,691 whole genomes.

Authors:  Alexander G Bick; Joshua S Weinstock; Satish K Nandakumar; Charles P Fulco; Erik L Bao; Seyedeh M Zekavat; Mindy D Szeto; Xiaotian Liao; Matthew J Leventhal; Joseph Nasser; Kyle Chang; Cecelia Laurie; Bala Bharathi Burugula; Christopher J Gibson; Amy E Lin; Margaret A Taub; Francois Aguet; Kristin Ardlie; Braxton D Mitchell; Kathleen C Barnes; Arden Moscati; Myriam Fornage; Susan Redline; Bruce M Psaty; Edwin K Silverman; Scott T Weiss; Nicholette D Palmer; Ramachandran S Vasan; Esteban G Burchard; Sharon L R Kardia; Jiang He; Robert C Kaplan; Nicholas L Smith; Donna K Arnett; David A Schwartz; Adolfo Correa; Mariza de Andrade; Xiuqing Guo; Barbara A Konkle; Brian Custer; Juan M Peralta; Hongsheng Gui; Deborah A Meyers; Stephen T McGarvey; Ida Yii-Der Chen; M Benjamin Shoemaker; Patricia A Peyser; Jai G Broome; Stephanie M Gogarten; Fei Fei Wang; Quenna Wong; May E Montasser; Michelle Daya; Eimear E Kenny; Kari E North; Lenore J Launer; Brian E Cade; Joshua C Bis; Michael H Cho; Jessica Lasky-Su; Donald W Bowden; L Adrienne Cupples; Angel C Y Mak; Lewis C Becker; Jennifer A Smith; Tanika N Kelly; Stella Aslibekyan; Susan R Heckbert; Hemant K Tiwari; Ivana V Yang; John A Heit; Steven A Lubitz; Jill M Johnsen; Joanne E Curran; Sally E Wenzel; Daniel E Weeks; Dabeeru C Rao; Dawood Darbar; Jee-Young Moon; Russell P Tracy; Erin J Buth; Nicholas Rafaels; Ruth J F Loos; Peter Durda; Yongmei Liu; Lifang Hou; Jiwon Lee; Priyadarshini Kachroo; Barry I Freedman; Daniel Levy; Lawrence F Bielak; James E Hixson; James S Floyd; Eric A Whitsel; Patrick T Ellinor; Marguerite R Irvin; Tasha E Fingerlin; Laura M Raffield; Sebastian M Armasu; Marsha M Wheeler; Ester C Sabino; John Blangero; L Keoki Williams; Bruce D Levy; Wayne Huey-Herng Sheu; Dan M Roden; Eric Boerwinkle; JoAnn E Manson; Rasika A Mathias; Pinkal Desai; Kent D Taylor; Andrew D Johnson; Paul L Auer; Charles Kooperberg; Cathy C Laurie; Thomas W Blackwell; Albert V Smith; Hongyu Zhao; Ethan Lange; Leslie Lange; Stephen S Rich; Jerome I Rotter; James G Wilson; Paul Scheet; Jacob O Kitzman; Eric S Lander; Jesse M Engreitz; Benjamin L Ebert; Alexander P Reiner; Siddhartha Jaiswal; Gonçalo Abecasis; Vijay G Sankaran; Sekar Kathiresan; Pradeep Natarajan
Journal:  Nature       Date:  2020-10-14       Impact factor: 69.504

  6 in total

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