| Literature DB >> 34747303 |
Patrick Terrence Brooks1, Lea Munthe-Fog1, Klaus Rieneck1, Frederik Banch Clausen1, Olga Ballesteros Rivera1, Eva Kannik Haastrup1, Anne Fischer-Nielsen1, Jesper Dyrendom Svalgaard1.
Abstract
Quantitative methods for assessing differentiative potency of adipose-derived stem/stromal cells may lead to improved clinical application of this multipotent stem cell, by advancing our understanding of specific processes such as adipogenic differentiation. Conventional cell staining methods are used to determine the formation of adipose areas during adipogenesis as a qualitative representation of adipogenic potency. Staining methods such as oil-red-O are quantifiable using absorbance measurements, but these assays are time and material consuming. Detection methods for cell characteristics using advanced image analysis by machine learning are emerging. Here, live-cell imaging was combined with a deep learning-based detection tool to quantify the presence of adipose areas and lipid droplet formation during adipogenic differentiation of adipose-derived stem/stromal cells. Different detection masks quantified adipose area and lipid droplet formation at different time points indicating kinetics of adipogenesis and showed differences between individual donors. Whereas CEBPA and PPARG expression seems to precede the increase in adipose area and lipid droplets, it might be able to predict expression of ADIPOQ. The applied method is a proof of concept, demonstrating that deep learning methods can be used to investigate adipogenic differentiation and kinetics in vitro using specific detection masks based on algorithm produced from annotation of image data.Entities:
Keywords: Adipogenesis; adipose-derived stem cells; deep learning; differentiation; machine learning; stem cells
Mesh:
Year: 2021 PMID: 34747303 PMCID: PMC8632106 DOI: 10.1080/21623945.2021.2000696
Source DB: PubMed Journal: Adipocyte ISSN: 2162-3945 Impact factor: 4.534
Figure 1.Experimental setup. (a) Adipose-derived stem cells (ASCs) underwent a 14-day adipogenic differentiation in a live-cell imaging system. The development of annotation masks was performed using images of cells and the generated masks were used to detect adipose area (Mask 1), ORO-guided adipose area (Mask 2), total cell area (Mask 3) and lipid droplets (Mask 4). (b) The generated detection masks were used to examine and quantify adipogenic differentiation in images obtained from live-cell imaging (day 0 – day 14). qPCR was used to analyse the expression of genes related to adipogenesis (ADIPOQ, PPARG, CEBPA and SCL7A8) at days 0, 3, 6, 9, 12 and 14 and possible correlation to adipose area and lipid droplet formation kinetics. The data represents three donors
Figure 2.Adipose area mask results. (a) Phase-contrast image of adipocytes without masks. (b) Mask 1 – annotation of adipose areas by human observations alone. (c) Mask 2 annotation of by comparison to bright field images of ORO-stained areas found in the same 96-well after staining. (d) Overlay of Mask 1 and Mask 2, showing additional areas detected when using Mask 2. (e) Quantification of adipose area detected by Mask 1 and Mask 2 at day 0 and day 14 of differentiation. The data represents three donors. A significant difference between the means of Mask 1 and Mask 2 for both day 0 (p < 0.05) and day 14 (p < 0.05) was observed
Figure 3.Adipogenic differentiation kinetics. (a) Example of adipose area (Mask 1) and lipid droplet (Mask 4) detection. (b) Detection of adipose cell area during the 14 days of differentiation. (c) Correlation between seeding density at day 3 and adipose cell area at day 14, r = 0.85, p < 0.001. (d) Lipid droplet formation during the 14 days of differentiation. (e) Distribution of lipid droplet size during differentiation. (f) Correlation between lipid droplet formation and adipose area, r = 0.98, p < 0.001
Figure 4.Adipose area per donor and adipogenic gene expression during the 14-day adipogenic differentiation