| Literature DB >> 34721428 |
Yan Ouyang1, Zhanzheng Zhao2, Guisen Li3, Huimin Luo4, Feifei Xu5, Leping Shao6, Zijin Chen1, Shuwen Yu1, Yuanmeng Jin1, Jing Xu1, Manman Shi1, Hafiz Muhammad Jafar Hussain1, Wen Du1, Zhengying Fang1, Xiaoxia Pan1, Weiming Wang1, Jingyuan Xie1, Nan Chen1.
Abstract
We aimed to validate three IgAN risk models proposed by an international collaborative study and another CKD risk model generated by an extended CKD cohort with our multicenter Chinese IgAN cohort. Biopsy-proven IgAN patients with an eGFR ≥15 ml/min/1.73 m2 at baseline and a minimum follow-up of 6 months were enrolled. The primary outcomes were a composite outcome (50% decline in eGFR or ESRD) and ESRD. The performance of those models was assessed using discrimination, calibration, and reclassification. A total of 2,300 eligible cases were enrolled. Of them, 288 (12.5%) patients reached composite outcome and 214 (9.3%) patients reached ESRD during a median follow-up period of 30 months. Using the composite outcome for analysis, the Clinical, Limited, Full, and CKD models had relatively good performance with similar C statistics (0.81, 0.81, 0.82, and 0.82, respectively). While using ESRD as the end point, the four prediction models had better performance (all C statistics > 0.9). Furthermore, subgroup analysis showed that the models containing clinical and pathological variables (Full model and Limited model) had better discriminatory abilities than the models including only clinical indicators (Clinical model and CKD model) in low-risk patients characterized by higher baseline eGFR (≥60 ml/min/1.73 m2). In conclusion, we validated recently reported IgAN and CKD risk models in our Chinese IgAN cohort. Compared to pure clinical models, adding pathological variables will increase performance in predicting ESRD in low-risk IgAN patients with baseline eGFR ≥60 ml/min/1.73 m2.Entities:
Keywords: IgA nephropathy; disease progression; end-stage renal disease; risk factor; risk prediction models
Mesh:
Substances:
Year: 2021 PMID: 34721428 PMCID: PMC8554097 DOI: 10.3389/fimmu.2021.753901
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 7.561
Figure 1Flowchart of patient selection.
Characteristics of patients in our external validation cohort, Barbour’s derivation cohort, and Tangri’s derivation cohort.
| Characteristic | External validation cohort | Barbour’s derivation cohort | Tangri’s derivation cohort |
|---|---|---|---|
| Patients, N | 2,300 | 2,781 | 3,449 |
| Follow up, median, years | 2.5 | 4.8 | 2.1 |
| Death | 10 (0.4) | 35 (1.2) | N/A |
| Age, median (IQR), or mean ± SD, years | 35 (28–44) | 35.6 (28.2–45.4) | 70 ± 14 |
| Male sex | 1,106 (48.1) | 1,608 (57.8) | 1,946 (56) |
| Race/ethnicity | |||
| Chinese | 2,300 (100) | 1,021 (36.7) | 0 (0) |
| Creatinine level at biopsy, median (IQR), μmol/L | 95 (71–134) | 92.0 (70.7–123.8) | N/A |
| eGFR at biopsy, median (IQR), or mean ± SD, mL/min/1.73 m2 | 76.9 (50.1–103.6) | 83.0 (56.7–108.0) | 36 ± 13 |
| <15 | 0 (0) | 0 (0) | 220 (6) |
| 15–30 | 155 (6.7) | 142 (5.1) | 926 (27) |
| 30–60 | 632 (27.5) | 657 (23.6) | 2,303 (67) |
| 60–90 | 648 (28.2) | 800 (28.8) | 0 (0) |
| >90 | 865 (37.6) | 1182 (42.5) | 0 (0) |
| MAP at biopsy, median (IQR), mmHg | 96.3 (88.3–105.7) | 96.7 (88.7–106.3) | N/A |
| Hemoglobin, median (IQR), or mean ± SD, g/dL | 12.9 (11.6–14.3) | N/A | 12.4 ± 1.8 |
|
| 1.3 (0.7–2.6) | 1.2 (0.7–2.2) | N/A |
| <0.5 | 345 (15.2) | 383 (13.9) | N/A |
| 0.5–1 | 511 (22.5) | 772 (28.1) | N/A |
| 1–2 | 625 (27.5) | 817 (29.7) | N/A |
| 2–3 | 333 (14.6) | 360 (13.1) | N/A |
| >3 | 460 (20.2) | 415 (15.1) | N/A |
|
| |||
| M1 | 779 (40.9) | 1,054 (38.0) | N/A |
| E1 | 623 (32.7) | 478 (17.3) | N/A |
| S1 | 1,385 (72.7) | 2,137 (77.0) | N/A |
| T1 | 457 (24.0) | 686 (24.7) | N/A |
| T2 | 272 (14.3) | 128 (4.6) | N/A |
| C1 | 757 (39.8) | N/A | N/A |
| C2 | 122 (6.4) | N/A | N/A |
|
| 1,593 (73.7) | 2,400 (86.7) | N/A |
|
| 1,292 (59.8) | 1,209 (43.5) | N/A |
| Primary outcome | |||
| 50% decline in eGFR | 264 (11.5) | 420 (15.1) | N/A |
| ESRD (kidney failure) | 214 (9.3) | 372 (13.4) | 386 (11) |
| Total primary outcome | 288 (12.5) | 492 (17.7) | N/A |
IQR, interquartile range; eGFR, estimated glomerular filtration rate calculated by CKD-EPI formula; MAP, mean arterial blood pressure; MESTC, mesangial (M) and endocapillary (E) hypercellularity, segmental sclerosis (S), interstitial fibrosis and tubular atrophy (T) and crescents (C); RASB, renin–angiotensin system blocker; ESRD, end-stage renal disease; N/A, not available.
Unless otherwise indicated, data are reported as number (percentage) of patients.
A total of 2,274 has proteinuria records.
A total of 1,904 has OXFORD-MESTC score.
A total of 2,161 has treatment records.
The goodness of fit for different models predicting the composite outcome (50% GFR declined or ESRD) and ESRD at 5 years.
| Clinical models | Clinical and pathology models | |||
|---|---|---|---|---|
| Outcomes | Clinical Model | CKD model | Limited Model | Full Model |
|
| ||||
| AIC | 712.1 | 706.28 | 689.33 | 687.68 |
| R2 | 0.23 | 0.24 | 0.27 | 0.27 |
| C statistic | 0.81 (0.76–0.86) | 0.81 (0.76–0.86) | 0.82 (0.77–0.87) | 0.82 (0.78–0.87) |
|
| ||||
| AIC | 453.14 | 450.11 | 441.26 | 440.24 |
| R2 | 0.31 | 0.31 | 0.32 | 0.31 |
| C statistic | 0.90 (0.86–0.93) | 0.90 (0.86–0.94) | 0.91 (0.88–0.94) | 0.91 (0.88–0.95) |
eGFR, estimated glomerular filtration rate; MAP, mean arterial blood pressure; MESTC, mesangial (M) and endocapillary hypercellularity (E), segmental sclerosis (S), interstitial fibrosis and tubular atrophy (T) and crescents(C); RASB, renin-angiotensin system blocker; AIC, Akaike information criterion; ref, reference.
A total of 1,764 patients have comprehensive treatment and clinical, histological records. Higher values for C statistic and R2 and lower values for AIC indicate better models.
Clinical Model, Limited Model and Full Model from Barbour’s study contain clinical variables only or clinical, pathological, medication use, and ethnic variables, respectively (19).
CKD Model from Tangri’s study contains clinical variables including baseline GFR, age, gender, and proteinuria (CKD model 3) (20).
For total group, comparison of models’ discrimination performance in the validation cohort for predicting the risk for two outcomes (ESRD or 50% GFR decreased; ESRD) at 5 years after biopsy.
| Clinical Model | CKD Model | Limited Model | |
|---|---|---|---|
|
| |||
|
| |||
| CKD model | 0.10 (-0.08–0.29) | – | |
| Limited model | 0.29 (0.10–0.47) | 0.40 (0.22–0.58) | – |
| Full model | 0.36 (0.18–0.55) | 0.40 (0.21–0.58) | 0.08 (-0.11–0.27) |
|
| |||
|
| |||
| CKD model | 0.004 (-0.22–0.23) | – | |
| Limited model | 0.41 (0.19–0.63) | 0.42 (0.20–0.63) | – |
| Full model | 0.36 (0.15–0.58) | 0.41 (0.19–0.62) | -0.02 (-0.25–0.21) |
cNRI, continuous net reclassification improvement; 95% CI, 95% confidence interval.
p < 0.001.
p < 0.05.
Figure 2Observed vs. predicted probability and calibration curve of ESRD at 5 years using the Clinical Model (A, E), CKD Model (B, F), Limited Model (C, G), and Full Model (D, H). The predicted and observed event probability estimates represent the mean predicted probability from risk-prediction model and the mean observed probability from the population divided into quartiles of predicted probability. For those models, risk groups were based on the 16th (lowest risk), 16th to 50th (intermediate risk), 50th to 84th (higher risk), and higher than 84th (highest risk) percentiles of the linear predictor. The mean predicted probability (%) vs. observed probability (%) categories for quartiles 1 through 4 correspond with 0.02% vs. 0.35%, 0.25% vs. 0.33%, 3.14% vs. 2.00%, and 20.36% vs. 22.26%, respectively, for the Clinical Model; 0.03% vs. 0.35%, 0.24% vs. 0.33%, 3.01% vs. 1.67%, and 20.65% vs. 22.97%, respectively, for the CKD Model; 0.03% vs. 0.00%, 0.21% vs. 0.33%, 2.53% vs. 2.50%, and 21.74% vs. 21.55%, respectively, for the Limited Model; and 0.03% vs. 0.00%, 0.22% vs. 0.50%, 2.42% vs. 1.50%, and 21.95% vs. 23.32%, respectively, for the Full Model. In addition, the Hosmer–Lemeshow test presented that the full model with race had p value > 0.05, which means the goodness of model fit is acceptable.
Figure 3Survival ROC curves of four models for predicting ESRD at 5 years in different subgroups. The area the under the curve (AUC) and 95% CI of the Clinical Model, CKD Model, Limited Model, and Full Model, respectively, in total patients (A); in patients with baseline eGFR < 60 ml/min/1.73 m2 (B); in patients with baseline eGFR ≥ 60 ml/min/1.73 m2 (C).