Literature DB >> 34716446

The case for post-predictional modifications in the AlphaFold Protein Structure Database.

Haroldas Bagdonas1, Carl A Fogarty2, Elisa Fadda3, Jon Agirre4.   

Abstract

Entities:  

Mesh：

Year:  2021        PMID： 34716446     DOI： 10.1038/s41594-021-00680-9

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN： 1545-9985            Impact factor:   15.369


× No keyword cloud information.
  11 in total

Review 1.  Current status of PTMs structural databases: applications, limitations and prospects.

Authors:  Alexandre G de Brevern; Joseph Rebehmed
Journal:  Amino Acids       Date:  2022-01-12       Impact factor: 3.520

2.  AlphaFold2 and RoseTTAFold predict posttranslational modifications. Chromophore formation in GFP-like proteins.

Authors:  Sophia M Hartley; Kelly A Tiernan; Gjina Ahmetaj; Adriana Cretu; Yan Zhuang; Marc Zimmer
Journal:  PLoS One       Date:  2022-06-16       Impact factor: 3.752

3.  Whole-proteome structures shed new light on posttranslational modifications.

Authors:  Robbie P Joosten; Jon Agirre
Journal:  PLoS Biol       Date:  2022-05-27       Impact factor: 9.593

4.  The structural context of posttranslational modifications at a proteome-wide scale.

Authors:  Isabell Bludau; Sander Willems; Wen-Feng Zeng; Maximilian T Strauss; Fynn M Hansen; Maria C Tanzer; Ozge Karayel; Brenda A Schulman; Matthias Mann
Journal:  PLoS Biol       Date:  2022-05-16       Impact factor: 9.593

5.  Where to From Here?

Authors:  Robert Schleif; Manuel Espinosa
Journal:  Front Mol Biosci       Date:  2022-03-25

6.  Researchers turn to deep learning to decode protein structures.

Authors:  Stephen Ornes
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-02       Impact factor: 12.779

Review 7.  Structural Models for Roseolovirus U20 And U21: Non-Classical MHC-I Like Proteins From HHV-6A, HHV-6B, and HHV-7.

Authors:  Grant C Weaver; Richa Arya; Christine L Schneider; Amy W Hudson; Lawrence J Stern
Journal:  Front Immunol       Date:  2022-04-04       Impact factor: 8.786

8.  A database of calculated solution parameters for the AlphaFold predicted protein structures.

Authors:  Emre Brookes; Mattia Rocco
Journal:  Sci Rep       Date:  2022-05-05       Impact factor: 4.996

9.  Comprehensive Collection and Prediction of ABC Transmembrane Protein Structures in the AI Era of Structural Biology.

Authors:  Hedvig Tordai; Erzsebet Suhajda; Ian Sillitoe; Sreenath Nair; Mihaly Varadi; Tamas Hegedus
Journal:  Int J Mol Sci       Date:  2022-08-09       Impact factor: 6.208

10.  Native glycosylation and binding of the antidepressant paroxetine in a low-resolution crystal structure of human myeloperoxidase.

Authors:  Lucas Krawczyk; Shubham Semwal; Jalal Soubhye; Salma Lemri Ouadriri; Martin Prévost; Pierre Van Antwerpen; Goedele Roos; Julie Bouckaert
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-08-09       Impact factor: 5.699
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.