Literature DB >> 34715021

Cytoplasmic DNA: sources, sensing, and role in aging and disease.

Karl N Miller1, Stella G Victorelli2, Hanna Salmonowicz3, Nirmalya Dasgupta1, Tianhui Liu1, João F Passos4, Peter D Adams5.   

Abstract

Endogenous cytoplasmic DNA (cytoDNA) species are emerging as key mediators of inflammation in diverse physiological and pathological contexts. Although the role of endogenous cytoDNA in innate immune activation is well established, the cytoDNA species themselves are often poorly characterized and difficult to distinguish, and their mechanisms of formation, scope of function and contribution to disease are incompletely understood. Here, we summarize current knowledge in this rapidly progressing field with emphases on similarities and differences between distinct cytoDNAs, their underlying molecular mechanisms of formation and function, interactions between cytoDNA pathways, and therapeutic opportunities in the treatment of age-associated diseases.
Copyright © 2021. Published by Elsevier Inc.

Entities:  

Keywords:  aging; cancer; cytoplasmic DNA; cytoplasmic chromatin fragment; micronucleus; mitochondrial DNA; retrotransposon; senescence

Mesh:

Substances:

Year:  2021        PMID: 34715021      PMCID: PMC8627867          DOI: 10.1016/j.cell.2021.09.034

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  212 in total

1.  Foreign nucleic acids as the stimulus to make interferon.

Authors:  A ISAACS; R A COX; Z ROTEM
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2.  The sirtuin SIRT6 regulates lifespan in male mice.

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Journal:  Nature       Date:  2012-02-22       Impact factor: 49.962

3.  Nuclear envelope rupture and repair during cancer cell migration.

Authors:  Celine M Denais; Rachel M Gilbert; Philipp Isermann; Alexandra L McGregor; Mariska te Lindert; Bettina Weigelin; Patricia M Davidson; Peter Friedl; Katarina Wolf; Jan Lammerding
Journal:  Science       Date:  2016-03-24       Impact factor: 47.728

4.  Chromothripsis and Kataegis Induced by Telomere Crisis.

Authors:  John Maciejowski; Yilong Li; Nazario Bosco; Peter J Campbell; Titia de Lange
Journal:  Cell       Date:  2015-12-17       Impact factor: 41.582

5.  Cytoplasmic DNA sensing by KU complex in aged CD4+ T cell potentiates T cell activation and aging-related autoimmune inflammation.

Authors:  Yan Wang; Zunyun Fu; Xutong Li; Yinming Liang; Siyu Pei; Shumeng Hao; Qingchen Zhu; Tao Yu; Yifei Pei; Jia Yuan; Jialin Ye; Jiemeng Fu; Jing Xu; Jin Hong; Ruirui Yang; Hui Hou; Xinfang Huang; Chao Peng; Mingyue Zheng; Yichuan Xiao
Journal:  Immunity       Date:  2021-03-04       Impact factor: 31.745

6.  Senescent intimal foam cells are deleterious at all stages of atherosclerosis.

Authors:  Bennett G Childs; Darren J Baker; Tobias Wijshake; Cheryl A Conover; Judith Campisi; Jan M van Deursen
Journal:  Science       Date:  2016-10-27       Impact factor: 47.728

7.  Deep senescent human fibroblasts show diminished DNA damage foci but retain checkpoint capacity to oxidative stress.

Authors:  Jian-Hua Chen; Susan E Ozanne
Journal:  FEBS Lett       Date:  2006-11-20       Impact factor: 4.124

8.  PTBP1-Mediated Alternative Splicing Regulates the Inflammatory Secretome and the Pro-tumorigenic Effects of Senescent Cells.

Authors:  Athena Georgilis; Sabrina Klotz; Christopher J Hanley; Nicolas Herranz; Benedikt Weirich; Beatriz Morancho; Ana Carolina Leote; Luana D'Artista; Suchira Gallage; Marco Seehawer; Thomas Carroll; Gopuraja Dharmalingam; Keng Boon Wee; Marco Mellone; Joaquim Pombo; Danijela Heide; Ernesto Guccione; Joaquín Arribas; Nuno L Barbosa-Morais; Mathias Heikenwalder; Gareth J Thomas; Lars Zender; Jesús Gil
Journal:  Cancer Cell       Date:  2018-07-09       Impact factor: 31.743

9.  Tight nuclear tethering of cGAS is essential for preventing autoreactivity.

Authors:  Hannah E Volkman; Stephanie Cambier; Elizabeth E Gray; Daniel B Stetson
Journal:  Elife       Date:  2019-12-06       Impact factor: 8.140

Review 10.  Mitochondrial DNA in inflammation and immunity.

Authors:  Joel S Riley; Stephen Wg Tait
Journal:  EMBO Rep       Date:  2020-03-23       Impact factor: 8.807

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  16 in total

Review 1.  DNA damage and repair in age-related inflammation.

Authors:  Yang Zhao; Matthew Simon; Andrei Seluanov; Vera Gorbunova
Journal:  Nat Rev Immunol       Date:  2022-07-13       Impact factor: 108.555

2.  The structure-selective endonucleases GEN1 and MUS81 mediate complementary functions in safeguarding the genome of proliferating B lymphocytes.

Authors:  Keith Conrad Fernandez; Laura Feeney; Ryan M Smolkin; Wei-Feng Yen; Allysia J Matthews; William Alread; John H J Petrini; Jayanta Chaudhuri
Journal:  Elife       Date:  2022-10-03       Impact factor: 8.713

3.  Upregulation of PD-L1 in Senescence and Aging.

Authors:  Angelique Onorati; Aaron P Havas; Brian Lin; Jayaraj Rajagopal; Payel Sen; Peter D Adams; Zhixun Dou
Journal:  Mol Cell Biol       Date:  2022-09-26       Impact factor: 5.069

4.  Kinase Activity of PAR1b, Which Mediates Nuclear Translocation of the BRCA1 Tumor Suppressor, Is Potentiated by Nucleic Acid-Mediated PAR1b Multimerization.

Authors:  Hiroko Nishikawa; Priscillia Christiany; Takeru Hayashi; Hisashi Iizasa; Hironori Yoshiyama; Masanori Hatakeyama
Journal:  Int J Mol Sci       Date:  2022-06-14       Impact factor: 6.208

Review 5.  Pathophysiological Role of Nucleic Acid-Sensing Pattern Recognition Receptors in Inflammatory Diseases.

Authors:  Norisuke Kano; Guang Han Ong; Daisuke Ori; Taro Kawai
Journal:  Front Cell Infect Microbiol       Date:  2022-06-06       Impact factor: 6.073

6.  The Inflamm-Aging Model Identifies Key Risk Factors in Atherosclerosis.

Authors:  Yudan He; Yao Chen; Lilin Yao; Junyi Wang; Xianzheng Sha; Yin Wang
Journal:  Front Genet       Date:  2022-05-30       Impact factor: 4.772

7.  Evaluation of Ectopic Mitochondrial DNA in HeLa Cells.

Authors:  Mohammad T Hussan; Noriko Matsui; Hideaki Matsui
Journal:  Curr Issues Mol Biol       Date:  2022-03-02       Impact factor: 2.976

Review 8.  Chromatin basis of the senescence-associated secretory phenotype.

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Journal:  Trends Cell Biol       Date:  2022-01-07       Impact factor: 21.167

Review 9.  Cellular senescence: all roads lead to mitochondria.

Authors:  Hélène Martini; João F Passos
Journal:  FEBS J       Date:  2022-01-20       Impact factor: 5.622

Review 10.  The Role of DNA Repair in Immunological Diversity: From Molecular Mechanisms to Clinical Ramifications.

Authors:  Peter Gullickson; Yunwen W Xu; Laura J Niedernhofer; Elizabeth L Thompson; Matthew J Yousefzadeh
Journal:  Front Immunol       Date:  2022-04-01       Impact factor: 8.786

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