| Literature DB >> 34714173 |
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Abstract
Responsible conduct of research is a cornerstone of rigorous scientific discovery. Institutional committees, independent advisory panels, and expert steering groups are among the frameworks in academia meant to provide guidance and assurances that research activities do not result in harm to the environment, research staff, or public safety. For research involving arthropods of public health importance, several documents currently exist to guide investigators in methodologies to consider for reducing risks from arthropod escape. However, to date, there has been no standardized set of recommendations on containment practices for arthropods modified with engineered transgenes capable of gene drive. This document is meant to serve as a practical reference to fill that gap. Recommendations outlined here address containment considerations when a risk assessment indicates a possibility of establishment of a new arthropod vector species or genetically modified arthropods in the local environment.Entities:
Keywords: arthropod; containment; gene drive; guidelines; laboratory safety; risk assessment; vector-borne disease
Mesh:
Year: 2021 PMID: 34714173 PMCID: PMC8787699 DOI: 10.1089/vbz.2021.0035
Source DB: PubMed Journal: Vector Borne Zoonotic Dis ISSN: 1530-3667 Impact factor: 2.133
Examples of Risk Assessment Questions and Considerations Regarding Accidental Escape of Arthropods Containing Gene Drives
| Select questions | Example considerations |
|---|---|
| 1. Could the experimental arthropod become established in the local environment? | Is there evidence that the same species is already present in the local environment? |
| 2. What is the technology that results in gene drive? | Is it an autonomous gene drive? A split drive? Or other molecular safeguards or forms of self-limiting drive? |
| 3. Has the ability of the experimental arthropod to serve as a vector been altered? | Is there reason to believe that the alteration could reduce or increase the probability of transmitting (under laboratory conditions) pathogen(s) that the arthropod is known to vector? |
| 4. Has the fitness of the experimental arthropod been modified? | What is the effect on lifespan? Reproductive capacity? Host-feeding preference? Sex ratio? Blood-feeding frequency? |
| 5. Can the arthropod be identified or removed from the local environment in the case of an escape? | What is the susceptibility of the modified arthropod to insecticides or other means of remediation? |
| 6. What are the projected public health, animal health, and environmental impacts of an escaped organism if remediation is not possible? | Expanded range of natural distribution/territory? |
| 7. Are there environmental hazards (flood zone, hurricanes, and tornados) at the facility location that should be considered? | What are the parameters, for example, a breakdown in secure areas, that may lead to an escape of the altered arthropods? |
| 8. Are there notification/communication plans related to a potential arthropod escape? | Is there a need to establish a crisis communication plan (timeliness of the notification process, and who should be notified, |
Overview of Arthropod Containment Levels (ACL 1–4) and Biosafety Containment Levels (BSL 1–4) to Include Arthropod Containment Level-2+ Presented in This Addendum
| Risk assessment ( | |||||
|---|---|---|---|---|---|
| Consideration (not exhaustive) | Appropriate ACL 1–4 | ||||
| 1 | 2 | 2+ | 3 | 4 | |
| Infection status; Presence or absence, type of pathogen | Up to BSL-1[ | Up to BSL-2[ | Up to BSL-3[ | Up to BSL-4[ | |
| The species in the local environment | Indigenous species with no change in local fauna or exotic but inviable or transient | Exotic with potential to establish | |||
| Transgenic status | Nontransgenic | Transgenic | |||
| Potential for sustained gene drive[ | N/A | None to low | Moderate to high | ||
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Adapted from the Arthropod Containment Guidelines v3.2, American Committee of Medical Entomology; American Society of Tropical Medicine and Hygiene 2019. General guidelines for best laboratory containment practices are shown for vector species according to ACL and biosafety level. Indigenous species are those species whose current range includes the research location. All others are considered exotic. Containment guidelines take into account the consequences of escape from a laboratory, in which the arthropod would be (1) inviable as a result of exposure to unfavorable conditions, (2) transient because conditions vary such that the arthropod would die during typical year climate cycle, or (3) has potential for establishment if escaped arthropods could reasonably be expected to persist through a typical climatic year. Arthropod containment specifics for each BSL should always be reviewed in the context of a laboratory-, vector-, and pathogen-specific risk assessment that is based on consultation between the investigator and the appropriate institutional oversight committee(s).
U.S. Department of Health and Human Services, Public Health Service, Centers for Disease Control and Prevention, National Institutes of Health (2020).
Evaluations concerning the potential for sustained gene drive must consider the local environment and number of individuals that would have to escape along with the specific transgene architecture.
Additional restrictions apply for work with arthropods in association with select agents.
When gene drive strains contain BSL-3 and BSL-4 agents, measures that are recommended for ACL-2+ should be considered for their compatibility with BSL-3 and BSL-4 requirements. At these levels, pathogen containment measures supersede incompatible ACL-2+ recommendations.
ACL, Arthropod Containment Level; BSL, biosafety containment level; PPE, personal protective equipment; SOP, standard operating procedure.
Table of Contents
| Abstract................................................................................................................................................................................... | 4 |
| Intent ...................................................................................................................................................................................... | 4 |
| 5 | |
| 7 | |
| Risk Assessment of Gene Drive Strains................................................................................................................................ | 7 |
| Introduction to performing a risk assessment................................................................................................................... | 7 |
| | 8 |
| General considerations....................................................................................................................................................... | 8 |
| Research conducted where the arthropod species is not found but could become established...................................... | 9 |
| Research conducted where the arthropod species is found.............................................................................................. | 9 |
| Reducing and managing risks............................................................................................................................................ | 10 |
| Risk considerations for laboratories exchanging strains................................................................................................... | 10 |
| | 11 |
| Arthropod Containment Levels (ACL) 2+ Recommendations............................................................................................. | 10 |
| Introduction to ACL 2+ recommendations........................................................................................................................ | 10 |
| Facility design and layout.................................................................................................................................................. | 12 |
| Location of arthropods................................................................................................................................................... | 12 |
| Insectary doors................................................................................................................................................................ | 12 |
| Insectary windows.......................................................................................................................................................... | 12 |
| Interior surfaces.............................................................................................................................................................. | 12 |
| Vacuum systems............................................................................................................................................................. | 12 |
| Source and harborage reduction..................................................................................................................................... | 12 |
| Equipment and supply storage....................................................................................................................................... | 12 |
| Plumbing and floor drains.............................................................................................................................................. | 12 |
| Electrical fixtures............................................................................................................................................................ | 12 |
| Sink................................................................................................................................................................................. | 12 |
| Illumination.................................................................................................................................................................... | 12 |
| Heating, ventilation, and air conditioning..................................................................................................................... | 12 |
| Facility compliance monitoring..................................................................................................................................... | 13 |
| Procedures: access/security................................................................................................................................................ | 13 |
| Security........................................................................................................................................................................... | 13 |
| Access restrictions.......................................................................................................................................................... | 13 |
| Notification and signage................................................................................................................................................. | 13 |
| Prevention of accidental dispersal outside the research laboratory by attachment on persons................................... | 13 |
| Procedures: handling/manipulation.................................................................................................................................... | 13 |
| Procedure design............................................................................................................................................................ | 13 |
| Routine decontamination................................................................................................................................................ | 13 |
| Special arthropod handling containers and areas.......................................................................................................... | 13 |
| Isolation of arthropods................................................................................................................................................... | 14 |
| Safe transport in the laboratory..................................................................................................................................... | 14 |
| Primary container identification and labeling................................................................................................................. | 14 |
| Primary container cleaning, disinfestation..................................................................................................................... | 14 |
| Disposal of arthropods.................................................................................................................................................... | 14 |
| Disposal of consumable supplies.................................................................................................................................... | 14 |
| Prevention of accidental dispersal outside the research laboratory through sewer system......................................... | 14 |
| Movement of equipment................................................................................................................................................. | 14 |
| Sterilization equipment.................................................................................................................................................... | 14 |
| Laboratory sharps............................................................................................................................................................ | 15 |
| Pest exclusion program................................................................................................................................................... | 15 |
| Procedures: monitoring/training.......................................................................................................................................... | 15 |
| Institutional biosafety committee and institutional animal care and use committee approvals................................... | 15 |
| Safety manual.................................................................................................................................................................. | 15 |
| Training............................................................................................................................................................................ | 15 |
| Monitoring for unintentional arthropod escape.............................................................................................................. | 15 |
| Escaped arthropod handling............................................................................................................................................ | 15 |
| Escaped arthropod reporting........................................................................................................................................... | 15 |
| Record keeping of escaped arthropods........................................................................................................................... | 16 |
| Personal protective equipment........................................................................................................................................ | 16 |
| Other procedural considerations......................................................................................................................................... | 16 |
| Containment director....................................................................................................................................................... | 16 |
| Large-cage indoor trials.................................................................................................................................................. | 16 |
| Emergency planning........................................................................................................................................................ | 16 |
| Shipping........................................................................................................................................................................... | 16 |
| Author Disclosure Statement.................................................................................................................................................. | 17 |
| Funding Information............................................................................................................................................................... | 17 |
| References............................................................................................................................................................................... | 17 |
| 17 | |
| Appendix A2. Addendum 1 Drafting Process....................................................................................................................... | 17 |
Glossary of Terms
| Term | Definition |
|---|---|
| Arthropod | An invertebrate animal, for example, mosquitoes and ticks belonging to the phylum Arthropoda |
| Arthropod containment level (ACL) | Designations (ACL-1 to ACL-4) used to describe arthropod handling practices, safety equipment, and facilities recommended for preventing the escape of arthropods. Level designation is based on assessed risk of harm due to the research procedures and harm from escape. |
| Autonomous gene drive | Gene drive (natural or engineered) comprising a single genetic unit that contains all the components ( |
| Biosafety level (BSL) | Designations (BSL-1 to BSL-4) used in a laboratory setting to identify the measures needed to protect workers, the environment, and the public from pathogens of veterinary and medical importance. Level designation is based on assessed risk of harm due to the research procedures as described in the Centers for Disease Control Biosafety in Microbiological and Biomedical Laboratories (U.S. Department of Health and Human Services, Public Health Service, Centers for Disease Control and Prevention, National Institutes of Health |
| Comparator | An unmodified organism to which a comparison is made. |
| Conspecific | Of the same species. |
| Escapee | An arthropod present outside of a secure facility or its intended containment. |
| Exotic | Organisms not found in a specific environment; nonindigenous species. |
| Facility | A building, room, or suite of rooms designed and utilized for a stated purpose, for example, for scientific research or arthropod containment. |
| Fecundity | The ability to produce offspring. |
| Fitness | The ability of an organism to mate, survive, and produce viable offspring. |
| Gene drive | A phenomenon of biased inheritance in which the prevalence of a genetic element (natural or synthetic) or specific alternative form of a gene (allele) is increased, even in the presence of some fitness cost. This leads to the preferential increase of a specific genotype that may determine a specific phenotype from one generation to the next, and potentially spread throughout a population (Alphey et al. |
| Heterozygous | Having two different alleles of a particular gene or genes |
| High-frequency threshold | When the number of arthropods carrying an engineered transgene must exceed a substantial fraction of the overall local population to display the process of gene drive. |
| Homozygous | Having two of the same form, or allele, of a particular gene(s). |
| Indigenous | Organisms naturally found in a specific environment; not exotic. |
| Infrastructure | The basic physical and organizational structures and facilities ( |
| Institutional animal care and use committee | A committee responsible for reviewing institutional research conducted by its faculty, students, or staff that involves the use of vertebrate animals with a goal of maintaining animal welfare standards. |
| Institutional biosafety committee | A committee responsible for reviewing institutional research conducted by its faculty, students, or staff that involves the use of recombinant or synthetic DNA in combination with biological organisms or agents. |
| Laboratory | A structure, such as a room, suite of rooms, or building, equipped for scientific experiments. |
| Laboratory sharps | Instruments or waste with sharp edges that can puncture or cut handlers or regular waste container bags. |
| Low-frequency threshold | When the number of arthropods carrying an engineered transgene can be very small compared with the overall local population and still display the process of gene drive. |
| Organism | A living being; an individual animal, plant, or single-celled life form. |
| Pathogen | A microorganism that can cause disease in humans, animals, and/or plants. |
| Phenotype | The physical appearance or set of observable characteristics of an organism resulting from the interaction between the individual organism's genotype and the environment. |
| Population | Organisms of a given species living in a specific geographic location that are capable of interbreeding. |
| Refractory | Resistant to an infection with a particular pathogen. |
| Refractory phenotype | Reduced vectorial competence relative to an unmodified strain. |
| Risk | Potential for loss or harm. |
| Risk assessment | The process of ascertaining the probability of loss or harm and gauging the severity of potential adverse effects. |
| Self-limiting gene drive | Approaches where the genetic modification will not pass on indefinitely through subsequent generations, even in the absence of mutations or heritable resistance. For gene drive, this will typically mean that the allele frequency of the gene drive will initially increase (the gene drive phenomenon) but later decrease, eventually disappearing. Also known as self-exhausting drives or approaches (Alphey et al. |
| Split gene drive | In a split gene drive, the necessary components for gene drive are split between two (or more) genetic loci. If one (or more) of these components is incapable of gene drive even in the presence of the others, this is a nonautonomous gene drive. If, in the presence of the other elements, each element can exhibit gene drive (“transcomplementing split gene drive”) the components in suitable combination may comprise an autonomous gene drive (q.v. Alphey et al. |
| Strain | A subtype of a particular species that has a common geographic or genetic origin. This also applies to pathogens of various genetic compositions. |
| Suppression phenotype | A reduced capacity to produce reproductively capable offspring. |
| Transgene | A DNA sequence or gene that is introduced into an organism through genetic engineering. |
| Transgenic | Of, relating to, or containing DNA transferred into an organism using genetic engineering. |
| Vector | An organism that carries and transmits an infectious pathogen. |
| Vectorial capacity | Overall ability of an organism to successfully transmit a pathogen in a natural setting. |
| Vector competence | Ability of an organism to become infected with a pathogen and transmit that pathogen in an experimental setting. |
| Wild type | Organisms of the same species that have not been genetically modified. |
Acronyms
| ACG | Arthropod containment guidelines |
| ACL | Arthropod containment level |
| ACME | American Committee of Medical Entomology |
| BSL | Biosafety containment level |
| FNIH | Foundation for the National Institutes of Health |
| GM | Genetically modified |
| PPE | Personal protective equipment |
| SOP | Standard operating procedure |