Literature DB >> 34698864

12p gain is predominantly observed in non-germinomatous germ cell tumors and identifies an unfavorable subgroup of central nervous system germ cell tumors.

Kaishi Satomi1,2, Hirokazu Takami2,3, Shintaro Fukushima2, Satoshi Yamashita4, Yuko Matsushita2, Yoichi Nakazato5, Tomonari Suzuki6, Shota Tanaka3, Akitake Mukasa3,7, Nobuhito Saito3, Masayuki Kanamori8, Toshihiro Kumabe8,9, Teiji Tominaga8, Keiichi Kobayashi10, Motoo Nagane10, Toshihiko Iuchi11, Koji Yoshimoto12,13, Kaoru Tamura14, Taketoshi Maehara14, Keiichi Sakai15, Kazuhiko Sugiyama16, Kiyotaka Yokogami17, Hideo Takeshima17, Masahiro Nonaka18, Akio Asai18, Toshikazu Ushijima4, Masao Matsutani19, Ryo Nishikawa6, Koichi Ichimura2,20.   

Abstract

BACKGROUND: Central nervous system (CNS) germ cell tumors (GCTs) are neoplasms predominantly arising in pediatric and young adult populations. While germinomas generally respond to chemotherapy and radiation, non-germinomatous GCTs (NGGCTs) require more intensive treatment. This study aimed to determine whether 12p gain could predict the prognosis of CNS GCTs.
METHODS: Eighty-two CNS GCTs were included in this study. The 12p gain was defined by an additional 12p in the background of potential polyploidy or polysomy. Cases were analyzed using an Illumina methylation 450K array for copy number investigations and validated by fluorescence in situ hybridization (FISH).
RESULTS: A 12p gain was found in 25-out-of-82 cases (30%) and was more frequent in NGGCTs (12% of germinoma cases and 50% of NGGCT cases), particularly in cases with malignant components, such as immature teratoma, yolk sac tumor, choriocarcinoma, and embryonal carcinoma. 12p gain and KIT mutation were mutually exclusive events. The presence of 12p gain correlated with shorter progression-free (PFS) and overall survival (OS) (10-year OS: 59% vs. 94%, with and without 12p gain, respectively, P = 0.0002), even with histology and tumor markers incorporated in the multivariate analysis. Among NGGCTs, 12p gain still had prognostic significance for PFS and OS (10-year OS: 47% vs. 90%, respectively, P = 0.02). The 12p copy number status was shared among histological components in mixed GCTs.
CONCLUSIONS: 12p gain may predict the presence of malignant components of NGGCTs, and poor prognosis of the patients. It may be associated with early tumorigenesis of CNS GCT.
© The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Neuro-Oncology. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  12p gain; DNA methylation; FISH; central nervous system germ cell tumor; copy number alteration

Mesh:

Year:  2022        PMID: 34698864      PMCID: PMC9071297          DOI: 10.1093/neuonc/noab246

Source DB:  PubMed          Journal:  Neuro Oncol        ISSN: 1522-8517            Impact factor:   13.029


  41 in total

1.  Mutually exclusive mutations of KIT and RAS are associated with KIT mRNA expression and chromosomal instability in primary intracranial pure germinomas.

Authors:  Shintaro Fukushima; Ayaka Otsuka; Tomonari Suzuki; Takaaki Yanagisawa; Kazuhiko Mishima; Akitake Mukasa; Nobuhito Saito; Toshihiro Kumabe; Masayuki Kanamori; Teiji Tominaga; Yoshitaka Narita; Soichiro Shibui; Mamoru Kato; Tatsuhiro Shibata; Masao Matsutani; Ryo Nishikawa; Koichi Ichimura
Journal:  Acta Neuropathol       Date:  2014-01-23       Impact factor: 17.088

2.  Comparative genomic hybridization in pineal germ cell tumors.

Authors:  C H Rickert; R Simon; M Bergmann; B Dockhorn-Dworniczak; W Paulus
Journal:  J Neuropathol Exp Neurol       Date:  2000-09       Impact factor: 3.685

3.  Global DNA hypomethylation in intratubular germ cell neoplasia and seminoma, but not in nonseminomatous male germ cell tumors.

Authors:  Georges J Netto; Yasutomo Nakai; Masashi Nakayama; Sana Jadallah; Antoun Toubaji; Norio Nonomura; Roula Albadine; Jessica L Hicks; Jonathan I Epstein; Srinivasan Yegnasubramanian; William G Nelson; Angelo M De Marzo
Journal:  Mod Pathol       Date:  2008-07-11       Impact factor: 7.842

4.  Isochromosome 12p and polysomy 12 in primary central nervous system germ cell tumors: frequency and association with clinicopathologic features.

Authors:  William R Sukov; John C Cheville; Caterina Giannini; Austin W Carlson; Brandon M Shearer; Jason P Sinnwell; Rhett P Ketterling
Journal:  Hum Pathol       Date:  2009-10-03       Impact factor: 3.466

5.  CBTRUS Statistical Report: Primary Brain and Other Central Nervous System Tumors Diagnosed in the United States in 2012-2016.

Authors:  Quinn T Ostrom; Gino Cioffi; Haley Gittleman; Nirav Patil; Kristin Waite; Carol Kruchko; Jill S Barnholtz-Sloan
Journal:  Neuro Oncol       Date:  2019-11-01       Impact factor: 12.300

6.  CNS germinomas are characterized by global demethylation, chromosomal instability and mutational activation of the Kit-, Ras/Raf/Erk- and Akt-pathways.

Authors:  Simone Laura Schulte; Andreas Waha; Barbara Steiger; Dorota Denkhaus; Evelyn Dörner; Gabriele Calaminus; Ivo Leuschner; Torsten Pietsch
Journal:  Oncotarget       Date:  2016-08-23

7.  Brain Tumor Registry of Japan (2005-2008).

Authors: 
Journal:  Neurol Med Chir (Tokyo)       Date:  2017       Impact factor: 1.742

8.  cnAnalysis450k: an R package for comparative analysis of 450k/EPIC Illumina methylation array derived copy number data.

Authors:  Maximilian Knoll; Jürgen Debus; Amir Abdollahi
Journal:  Bioinformatics       Date:  2017-08-01       Impact factor: 6.937

9.  Evidence that active demethylation mechanisms maintain the genome of carcinoma in situ cells hypomethylated in the adult testis.

Authors:  D G Kristensen; J E Nielsen; A Jørgensen; N E Skakkebæk; E Rajpert-De Meyts; K Almstrup
Journal:  Br J Cancer       Date:  2013-11-28       Impact factor: 7.640

10.  Report From the International Society of Urological Pathology (ISUP) Consultation Conference on Molecular Pathology of Urogenital Cancers: IV: Current and Future Utilization of Molecular-Genetic Tests for Testicular Germ Cell Tumors.

Authors:  Leendert H J Looijenga; Theodorus H Van der Kwast; David Grignon; Lars Egevad; Glen Kristiansen; Chia-Sui Kao; Muhammad T Idrees
Journal:  Am J Surg Pathol       Date:  2020-07       Impact factor: 6.298

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  3 in total

1.  Roles of Tumor Markers in Central Nervous System Germ Cell Tumors Revisited with Histopathology-Proven Cases in a Large International Cohort.

Authors:  Hirokazu Takami; Christopher S Graffeo; Avital Perry; Caterina Giannini; Yoichi Nakazato; Nobuhito Saito; Masao Matsutani; Ryo Nishikawa; Koichi Ichimura; David J Daniels
Journal:  Cancers (Basel)       Date:  2022-02-15       Impact factor: 6.639

Review 2.  Biomarkers for risk-based treatment modifications for CNS germ cell tumors: Updates on biological underpinnings, clinical trials, and future directions.

Authors:  Hirokazu Takami; Koichi Ichimura
Journal:  Front Oncol       Date:  2022-09-05       Impact factor: 5.738

Review 3.  Pathogenesis of central nervous system germ cell tumors.

Authors:  Siyuan Liu; Linan Ren; Xue Gao; Mengjin Hao; Guixia Wang
Journal:  Front Oncol       Date:  2022-09-09       Impact factor: 5.738

  3 in total

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