Literature DB >> 34687065

Self-supervised IVIM DWI parameter estimation with a physics based forward model.

Serge Didenko Vasylechko1,2, Simon K Warfield1,2, Onur Afacan1,2, Sila Kurugol1,2.   

Abstract

PURPOSE: To assess the robustness and repeatability of intravoxel incoherent motion model (IVIM) parameter estimation for the diffusion-weighted MRI in the abdominal organs under the constraints of noisy diffusion signal using a novel neural network method.
METHODS: Clinically acquired abdominal scans of Crohn's disease patients were retrospectively analyzed with regions segmented in the kidney cortex, spleen, liver, and bowel. A novel IVIM parameter fitting method based on the principle of a physics guided self-supervised convolutional neural network that does not require reference parameter estimates for training was compared to a conventional non-linear least squares (NNLS) algorithm, and a voxelwise trained artificial neural network (ANN).
RESULTS: Results showed substantial increase in parameter robustness to the noise corrupted signal. In an intra-session repeatability experiment, the proposed method showed reduced coefficient of variation (CoV) over multiple acquisitions in comparison to conventional NLLS method and comparable performance to ANN. The use of D and f estimates from the proposed method led to the smallest misclassification error in linear discriminant analysis for characterization between normal and abnormal Crohn's disease bowel tissue. The fitting of D ∗ parameter remains to be challenging.
CONCLUSION: The proposed method yields robust estimates of D and f IVIM parameters under the constraints of noisy diffusion signal. This indicates a potential for the use of the proposed method in conjunction with accelerated DW-MRI acquisition strategies, which would typically result in lower signal to noise ratio.
© 2021 International Society for Magnetic Resonance in Medicine.

Entities:  

Keywords:  IVIM; abdominal; diffusion; parameter estimation; pediatric; self-supervised

Mesh:

Year:  2021        PMID: 34687065      PMCID: PMC8627432          DOI: 10.1002/mrm.28989

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  23 in total

1.  In vivo assessment of optimal b-value range for perfusion-insensitive apparent diffusion coefficient imaging.

Authors:  Moti Freiman; Stephan D Voss; Robert V Mulkern; Jeannette M Perez-Rossello; Michael J Callahan; Simon K Warfield
Journal:  Med Phys       Date:  2012-08       Impact factor: 4.071

2.  Toward an optimal distribution of b values for intravoxel incoherent motion imaging.

Authors:  Andreas Lemke; Bram Stieltjes; Lothar R Schad; Frederik B Laun
Journal:  Magn Reson Imaging       Date:  2011-05-05       Impact factor: 2.546

3.  Spatially constrained incoherent motion method improves diffusion-weighted MRI signal decay analysis in the liver and spleen.

Authors:  Vahid Taimouri; Onur Afacan; Jeannette M Perez-Rossello; Michael J Callahan; Robert V Mulkern; Simon K Warfield; Moti Freiman
Journal:  Med Phys       Date:  2015-04       Impact factor: 4.071

4.  Simultaneous Multislice Diffusion-Weighted Imaging of the Kidney: A Systematic Analysis of Image Quality.

Authors:  David Kenkel; Borna K Barth; Marco Piccirelli; Lukas Filli; Tim Finkenstädt; Cäcilia S Reiner; Andreas Boss
Journal:  Invest Radiol       Date:  2017-03       Impact factor: 6.016

5.  Deep learning using a biophysical model for robust and accelerated reconstruction of quantitative, artifact-free and denoised R 2 * images.

Authors:  Max Torop; Satya V V N Kothapalli; Yu Sun; Jiaming Liu; Sayan Kahali; Dmitriy A Yablonskiy; Ulugbek S Kamilov
Journal:  Magn Reson Med       Date:  2020-07-21       Impact factor: 4.668

6.  A novel bayesian approach with conditional autoregressive specification for intravoxel incoherent motion diffusion-weighted MRI.

Authors:  Ettore Lanzarone; Alfonso Mastropietro; Elisa Scalco; Antonello Vidiri; Giovanna Rizzo
Journal:  NMR Biomed       Date:  2019-12-29       Impact factor: 4.044

Review 7.  Diffusion-weighted MRI in the body: applications and challenges in oncology.

Authors:  Dow-Mu Koh; David J Collins
Journal:  AJR Am J Roentgenol       Date:  2007-06       Impact factor: 3.959

8.  Spatially-constrained probability distribution model of incoherent motion (SPIM) for abdominal diffusion-weighted MRI.

Authors:  Sila Kurugol; Moti Freiman; Onur Afacan; Jeannette M Perez-Rossello; Michael J Callahan; Simon K Warfield
Journal:  Med Image Anal       Date:  2016-04-01       Impact factor: 8.545

9.  Variability of non-Gaussian diffusion MRI and intravoxel incoherent motion (IVIM) measurements in the breast.

Authors:  Mami Iima; Masako Kataoka; Shotaro Kanao; Makiko Kawai; Natsuko Onishi; Sho Koyasu; Katsutoshi Murata; Akane Ohashi; Rena Sakaguchi; Kaori Togashi
Journal:  PLoS One       Date:  2018-03-01       Impact factor: 3.240

10.  Accelerated Acquisition of High-resolution Diffusion-weighted Imaging of the Brain with a Multi-shot Echo-planar Sequence: Deep-learning-based Denoising.

Authors:  Motohide Kawamura; Daiki Tamada; Satoshi Funayama; Marie-Luise Kromrey; Shintaro Ichikawa; Hiroshi Onishi; Utaroh Motosugi
Journal:  Magn Reson Med Sci       Date:  2020-03-06       Impact factor: 2.471

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