| Literature DB >> 34685558 |
Chia-Ni Lin1,2, Ming-Shi Shiao3, Mei-Ling Cheng3,4,5,6, Chiung-Mei Chen7, Hung-Chou Kuo7.
Abstract
This study aims to present the serum metabolite profiles of patients with acute intermittent porphyria (AIP) and identify specific metabolites that could potentially discriminate between AIP, asymptomatic HMBS mutation carriers, and healthy individuals. The study cohort included 46 female participants: 21 AIP patients, 5 asymptomatic carriers, and 20 'normal' participants (without HMBS gene mutation). Serum samples were analyzed for 157 selected metabolites or clinical variables using an assay combining liquid chromatography MS/MS and direct flow injection. AUC analysis was used to distinguish unique variables between the three groups. A total of 15 variables differed significantly between the AIP and normal control group (VIP score > 1.0 and p < 0.05 with FDR correction). In AIP patients, the levels tyrosine, valine, and eGFR were significantly lower, and the levels of sphingomyelin C16:0, C24:0, C24:1, phosphatidylcholine diacyl C32:1, C36:1, C36:3, ornithine, sarcosine, citrulline, blood urea nitrogen AST, and ALT were significantly higher. The AUC of these 15 variables in discriminating between normal and AIP patients ranged between 0.73 and 0.94 (p < 0.05). In conclusion, serum metabolic profiles differ between normal individuals and patients carrying the HMBS mutation. The unique metabolites associated with AIP identified in this study may be useful for monitoring the development of AIP symptoms.Entities:
Keywords: heme metabolism; metabolic reprogramming; metabolomic profiling; porphobilinogen; porphobilinogen deaminase; δ-aminolevulinic acid
Mesh:
Year: 2021 PMID: 34685558 PMCID: PMC8533736 DOI: 10.3390/cells10102579
Source DB: PubMed Journal: Cells ISSN: 2073-4409 Impact factor: 6.600
Baseline characteristics of normal, asymptomatic carriers, and AIP patients.
| Normal | Carrier | AIP | ||
|---|---|---|---|---|
| N = 20 | N = 5 | N = 21 | ||
| Age (y) | 41 (34.50, 48.00) | 42 (29.00, 45.00) | 43 (34.00, 51.00) | 0.74 |
| BMI (kg/m2) | 21.90 (20.50, 26.80) | 24.10 (22.90, 24.40) | 22.50 (19.50, 24.80) | 0.76 |
| BUN (mg/dL) | 12.45 (10.75, 14.60) | 10.50 (10.50, 11.80) | 22.60 (18.40, 30.50) ‡§ | <0.0001 * |
| AST (U/L) | 21.00 (19.00, 22.00) | 23.00 (22.00, 25.00) | 28.00 (25.00, 30.00) ‡ | 0.0003 * |
| ALT (U/L) | 12.00 (11.00, 16.50) | 18.00 (14.00, 26.00) | 26.00 (19.00, 32.00) ‡ | 0.001 * |
| AC (mg/dL) | 86.50 (81.50, 96.50) | 90.00 (83.00, 90.00) | 88.00 (82.00, 91.00) | 0.98 |
| Hb-Alc (%) | 5.40 (5.20, 5.50) | 5.20 (5.10, 5.50) | 5.40 (5.00, 5.60) | 0.99 |
| T-CHOL (mg/dL) | 183.50 (156.00, 196.50) | 169.00 (161.00, 172.00) | 200.00 (184.00, 217.00) | 0.04 * |
| HDL-C (mg/dL) | 55.00 (48.50, 67.00) | 66.00 (58.00, 75.00) | 68.00 (60.00, 77.00) ‡ | 0.03 * |
| LDL-C (mg/dL) | 101.50 (85.00, 118.00) | 95.00 (85.00, 98.00) | 104.00 (100.00, 117.00) | 0.30 |
| Triglyceride (mg/dL) | 74.00 (63.00, 120.50) | 51.00 (47.00, 58.00) | 87.00 (68.00, 125.00) | 0.12 |
| Creatinine (mg/dL) | 0.62 (0.54, 0.68) | 0.51 (0.47, 0.52) | 1.00 (0.80, 1.37) ‡§ | <0.0001 * |
| eGFR (mL/min/1.73 m2) | 108.00 (91.00, 127.50) | 132.00 (127.00, 157.00) | 64.00 (42.00, 77.00) ‡§ | <0.0001 * |
AIP—acute intermittent porphyria; BMI—body mass index; BUN—blood urea nitrogen; AST—aspartate aminotransferase; ALT—alanine aminotransferase; AC—fasting blood glucose; Hb-A1c—glycated hemoglobin; T-CHOL—total cholesterol; HDL-C—high-density lipoprotein cholesterol; LDL-C—low-density lipoprotein cholesterol; eGFR—estimated glomerular filtration rate. Data are presented as median and interquartile. * p < 0.05 by Kruskal–Wallis test. ‡ p < 0.05 for Dunn’s multiple comparison test between normal and AIP group. § p < 0.05 for Dunn’s multiple comparison test between carrier and AIP group.
Figure 1Targeted metabolomics profiles of normal, asymptomatic carriers, and AIP patients. Extracted plasma from AIP patients (n = 21), asymptomatic carriers (n = 5), and normal (n = 20) were analyzed by LC–MS/MS and direct flow injection assay. (A) Principal component analysis (PCA) did not demonstrate a clear separation between the three groups. (B) The partial least squares discriminant analysis (PLS-DA) demonstrates a clear separation of variables between groups with and without AIP (R2Y = 0.54, Q2 = 0.38). (C) Metabolites and clinical variables with variable importance in the projection (VIP) score > 1.0, indicating their contribution to the classification in the PLS-DA model. eGFR—estimated glomerular filtration rate; R2Y—cumulative variation in the Y matrix; Q2—predictive performance of the model.
Figure 2Clinical variables and metabolite levels differed significantly between normal, asymptomatic carriers, and AIP patients. Statistical differences were determined by one-way ANOVA, and data are presented as minimum, first quartile, third quartile, and maximum (line, median value; diamond, mean value; circle, outlier value) in box-and-whisker plots. Pair-wise comparison was executed using Dunn’s post hoc test. (A) Amino acids; (B) Sphingomyelins; (C) Glycerophospholipids; (D) Kidney function, urea cycle, and other serum markers. * p < 0.05 for Dunn’s post hoc test.
Variables identified by AUC analysis as distinguishing AIP patients from asymptomatic carriers and from normal participants.
| Variables (µM) | AUC |
| FDR | Sensitivity | Specificity |
|---|---|---|---|---|---|
| Carrier vs. AIP | |||||
| Blood urea nitrogen | 0.962 |
| 0.233 | 0.857 | 1.000 |
| Citrulline | 0.910 |
| 0.233 | 0.810 | 1.000 |
| Normal vs. AIP | |||||
| Blood urea nitrogen | 0.940 |
|
| 0.857 | 0.950 |
| eGFR (mL/min/1.73 m2) | 0.906 |
|
| 0.762 | 0.950 |
| AST | 0.849 |
|
| 0.810 | 0.850 |
| ALT | 0.838 |
|
| 0.762 | 0.900 |
| Citrulline | 0.855 |
|
| 0.818 | 0.900 |
| Ornithine | 0.725 |
|
| 0.857 | 0.550 |
| Tyrosine | 0.855 |
|
| 0.952 | 0.750 |
| Valine | 0.818 |
|
| 0.810 | 0.750 |
| Sarcosine | 0.875 |
|
| 0.762 | 0.900 |
| Phosphatidylcholines diacyl C32:1 | 0.831 |
|
| 0.905 | 0.750 |
| Phosphatidylcholines diacyl C36:1 | 0.833 |
|
| 0.619 | 1.000 |
| Phosphatidylcholines diacyl C36:3 | 0.863 |
|
| 1.000 | 0.650 |
| SM C16:0 | 0.777 |
|
| 0.714 | 0.750 |
| SM C24:0 | 0.786 |
|
| 0.667 | 0.900 |
| SM C24:1 | 0.788 |
|
| 0.476 | 1.000 |
AST—aspartate aminotransferase; ALT—alanine aminotransferase; AUC—area under the curve; AIP—acute intermittent porphyria; eGFR—estimated glomerular filtration rate; FDR—false discovery rate. Numbers in bold indicate statistical significance (p < 0.05).
Figure 3Area under the curve analysis of selected variables for determining AIP. AUC between control and AIP, 0.97; model includes eGFR and sphingomyelin C24:0.
Figure 4Putative metabolic pathway based on serum metabolic profiling results. Baseline serum metabolic profiles differ between normal participants and AIP patients, including amino acids, sphingomyelins, glycerophospholipids, and markers for urea cycle, TCA cycle, glycine, and creatinine synthesis. In AIP patients, the levels of branched-chain amino acids (BCAA: Valine, Leucine, Isoleucine), and aromatic amino acids (AAA: Tryptophan, Tyrosine), were significantly lower (indicated by light blue arrows); levels of the sphingomyelin (SM) (C16:0, C24:0, C24:1), phosphatidylcholine diacyl (C32:1, C36:1, C36:3), and LysoPC in the one-carbon metabolism pathway were higher (indicated by red arrows). Alterations in glycine synthesis, creatinine metabolism, and urea cycle were evident from the elevated levels of serine, sarcosine, glycine, urea, citrulline, ornithine, and aspartate in AIP patients (indicated by red arrows). Blue horizontal bar indicates no difference. Unlabeled metabolites were not quantified in this study.