| Literature DB >> 34678985 |
Abstract
Currently, digital technologies influence information dissemination in all business sectors, with great emphasis put on exploitation strategies. Public administrations often use information systems and establish open data repositories, primarily supporting their operation but also serving as data providers, facilitating decision-making. As such, risk analysis in the public health sector, including food safety authorities, often relies on digital technologies and open data sources. Global food safety challenges include marine biotoxins (MBs), being contaminants whose mitigation largely depends on risk analysis. Ciguatera Fish Poisoning (CFP), in particular, is a MB-related seafood intoxication attributed to the consumption of fish species that are prone to accumulate ciguatoxins. Historically, CFP occurred endemically in tropical/subtropical areas, but has gradually emerged in temperate regions, including European waters, necessitating official policy adoption to manage the potential risks. Researchers and policy-makers highlight scientific data inadequacy, under-reporting of outbreaks and information source fragmentation as major obstacles in developing CFP mitigation strategies. Although digital technologies and open data sources provide exploitable scientific information for MB risk analysis, their utilization in counteracting CFP-related hazards has not been addressed to date. This work thus attempts to answer the question, "What is the current extent of digital technologies' and open data sources' utilization within risk analysis tasks in the MBs field, particularly on CFP?", by conducting a systematic literature review of the available scientific and grey literature. Results indicate that the use of digital technologies and open data sources in CFP is not negligible. However, certain gaps are identified regarding discrepancies in terminology, source fragmentation and a redundancy and downplay of social media utilization, in turn constituting a future research agenda for this under-researched topic.Entities:
Keywords: Ciguatera Fish Poisoning; digital technologies; marine biotoxins; open data; risk analysis
Mesh:
Substances:
Year: 2021 PMID: 34678985 PMCID: PMC8539326 DOI: 10.3390/toxins13100692
Source DB: PubMed Journal: Toxins (Basel) ISSN: 2072-6651 Impact factor: 4.546
Literature review protocol (Scopus search).
| Item | Description | ||||
|---|---|---|---|---|---|
| Time Period | 2010 to Date | ||||
| Boolean Operators | AND/OR | ||||
| Keywords | 1: Digital Technology | 2: Open Data | 3: Risk Analysis | 4: Biotoxins | 5: CFP |
| Digital technolog* 1 | Open data | Risk analysis | Biotoxin* | Ciguatera | |
| Digital tool* | Big data | Risk management | Marine toxin* | Ciguatoxin* | |
| Digital media | Public data | Risk communication | Phycotoxin* | ||
| Digital transformation | Open source* | Risk* | |||
| Digitalization | Data* | ||||
| Information technolog* | |||||
| ICT(s) | |||||
| Social media | |||||
| Language | English | ||||
| Availability | Documents available online as full text | ||||
| Research Discipline | All subject areas (indicatively: Pharmacology, Toxicology and Pharmaceutics; Agricultural and Biological Sciences; Environmental Science; Medicine; Chemistry; Immunology and Microbiology; Biochemistry, Genetics and Molecular Biology; Engineering; Veterinary; Earth and Planetary Sciences; Chemical Engineering; Health Professions; Multidisciplinary; Computer Science; Arts and Humanities; Social Sciences) | ||||
| Exclusion Criteria | Articles unrelated to intended subject (keywords with other semantic way) | ||||
| Publication type | All available types (Article, Review, Book, Book chapter, Conference paper, Conference review, Letter, Editorial, Note, Short survey, Business article or Press, Erratum, Data paper) | ||||
1 An asterisk was used as a wildcard symbol to retrieve all possible variations of the relevant search term.
Figure 1Combined search for the “Risk analysis”. “Biotoxins” and “Ciguatera” group keywords by (A) subject areas and (B) types of retrieved documents. “Other” indicates research disciplines not individually mentioned (refer to Table 1 for details).
Keywords identified in articles meeting the eligibility criteria.
| Keyword Group/Keywords Found | Number of Studies * |
|---|---|
|
|
|
| Software | 3 |
| Smartphone | 3 |
| Website | 7 |
| Digital technologies | 1 |
| Social media | 2 |
|
|
|
| Database | 28 |
| Big data | 1 |
| Dataset/data | 4 |
|
|
|
* Number of studies containing keywords from individual groups cumulatively exceed the total number of selected articles, as some studies contain keywords of both groups.
Open data sources used in CFP literature related to risk analysis (sources referred to as ‘websites’ are included).
| Geographic Coverage | Organization/Website ID | Source Type | Nature of CFP-Related Data | Link (1) | Reference (2) |
|---|---|---|---|---|---|
| Worldwide | 3i Interactive Key and Taxonomic Database Software | Public database and software | Taxonomic species identification |
| [ |
| Worldwide | AlgaeBase | Public database | Algal species information |
| [ |
| Worldwide | Barcode of Life Data System (BOLD) | Public database and open data portal | DNA-based species identification |
| [ |
| Worldwide | Bayesian Evolutionary Analysis Sampling Trees (BEAST)—Tracer | Open-source software | Molecular sequencing/Phylogenetic analysis |
| [ |
| Worldwide | Bayesian Tip-association Significance testing (BaTS) | Open-source software | Phylogenetic analysis |
| [ |
| Worldwide | FishBase—A Global Information System on Fishes | Public database | Ciguateric fish species | [ | |
| Worldwide | FishSource—Sustainable Fisheries Partnership | Public database | Status of fisheries, fish stocks, and aquaculture |
| [ |
| Worldwide | GenBank | Public database and open data portal | Genetic sequence (algal species and ciguateric fish) |
| [ |
| Worldwide | Global Biodiversity Information Facility (GBIF)—Integrated Publishing Toolkit (IPT) | Open data portal | Biodiversity (reef fish, invertebrates and algae, HABs, water quality) |
| [ |
| Worldwide | Intergovernmental Oceanographic Commission of UNESCO—Harmful Algal Bloom Programme/IOC-UNESCO Taxonomic Reference List of Harmful Micro Algae | Public database | Harmful microalgal species information |
| [ |
| Worldwide | MrBayes: Bayesian Inference of Phylogeny | Open-source software | Phylogenetic and evolutionary models |
| [ |
| Worldwide | National Aeronautics and Space Administration (NASA)/Ocean Color & Physical Oceanography Distributed Active Archive Center (PO.DAAC) | Public database, maps and open data portal | Sea surface temperature, salinity, density |
| [ |
| Worldwide | National Aeronautics and Space Administration (NASA)/Worldview EOSDIS (Worldview app) and Earth Science Data Systems (ESDS) program (Earthdata) | Public database, maps and open data portal | Satellite-derived sea surface temperature |
| [ |
| Worldwide | National Oceanic and Atmospheric Administration (NOAA)—Coral Reef Watch (CRW) | Public database and maps | Coral Reef Satellite Monitoring |
| [ |
| Worldwide | NOAA—Physical Sciences Laboratory (PSL) | Open data portal | Climate, sea surface temperature |
| [ |
| Worldwide | NOAA—National Centers for Environmental Information (NCEI) (formerly National Climate Data Center) | Public database, maps and open data portal | Environmental (atmospheric, coastal, geophysical & oceanic) |
| [ |
| Worldwide | Ocean Biodiversity Information System (OBIS) | Open data portal and public maps | Toxic algal species occurrence |
| [ |
| Worldwide | The Met Office UK—Hadley Centre Sea Ice and Sea Surface Temperature data set (HadISST) | Open data portal | Climate, sea surface temperature |
| [ |
| Worldwide | UNESCO–IOC–ICES–PICES/Harmful Algae Event Database (HAEDAT) | Public database and maps | HAB events |
| [ |
| Worldwide | World Register of Marine Species (WoRMS) | Public database | Marine organisms’ taxonomy (algae and fish) |
| [ |
| European Union | European Commission—Rapid Alert System for Food and Feed (RASFF) | Public database | Occurrence in foods |
| [ |
| France, Italy, Monaco | RAMOGE/Regional workshop on monitoring and management strategies for benthic HABs | Open documents repository | Various informational |
| [ |
| Canary Islands | Gobierno de Canarias | Open documents repository | CFP occurrence data, general information on CFP intoxication in Canary islands |
| [ |
| America | Pan American Health Organization/Institutional Repository for Information sharing | Open documents repository | Various informational |
| [ |
| America (various territories) | NOAA—Environmental Sensitivity Index (ESI) and Geographical Information System (GIS) Mapping | Public database, maps | Benthic habitat data |
| [ |
| United States of America | Centers for Disease Control and Prevention (CDC)—National Center for Environmental Health | Open documents repository | General information, Ciguateric fish species, HAB events, statistics |
| [ |
| United States of America | Centers for Disease Control and Prevention (CDC)—Foodborne Disease Outbreak Surveillance System | Open documents repository | Foodborne outbreaks’ occurrence |
| |
| United States of America | CDC—National Outbreak Reporting System (NORS) | Public database, maps and statistics, open data portal | Outbreaks’ occurrence by etiology, year, state, primary mode, setting | ||
| United States of America | CDC—One Health Harmful Algal Bloom System (OHHABS) | Open documents repository | HABs-related human and animal illnesses & environmental data |
| [ |
| United States of America | Food and Drug Administration (FDA) | Open documents repository | Public policies, |
| [ |
| Florida/US | Florida Complaint & Outbreak Reporting System (FL-CORS) | Public database | Online food and |
| [ |
| Florida/US | Coral Reef Evaluation and Monitoring Project (CREMP) | Open data portal | Coral reefs |
| [ |
| Florida/US | Southeast Environmental Research Center (SERC)—Water Quality Monitoring Network | Open documents repository | Water quality monitoring |
| [ |
| Florida/US | NOAA—National Hurricane Center (NHC) | Public database, open data portal | Tropical cyclones reporting (North Atlantic and eastern North Pacific basins) |
| [ |
| Hawaii | NOAA—Central Pacific Hurricane Center | Public database, open data portal | Tropical cyclones reporting (central Pacific) |
| [ |
| Hawaii | State of Hawaii/Department of Health | Open documents repository | Case reports and statistics |
| [ |
| Caribbean countries | Caribbean Epidemiology Center (CAREC) | Open documents repository | Epidemiology |
| [ |
| Caribbean countries | Caribbean Public Health Agency (CARPHA) | Open documents repository | Public health data |
| [ |
| Caribbean countries | Caribbean Coastal Ocean Observing System (CARICOOS)—Part of Integrated Ocean Observing System (IOOS) | Open data portal, public database and maps | Climate, sea surface temperature, algae index, chlorophyll concentration |
| [ |
| Caribbean + Gulf of Mexico | University of South Florida- College of Marine Science-Optical Oceanography Laboratory/Satellite-based Sargassum Watch System (SaWS) | Open data portal, public database and maps | [ | ||
| Mexico | Gobierno de México/Comisión Federal de Protección Contra Riesgos Sanitarios (COFEPRIS) | Open documents repository | HAB events |
| [ |
| Australia | Australian Government Department of Health (AGDH)/Communicable Diseases Intelligence | Scientific journal (open access) | Epidemiology, surveillance, prevention & control |
| [ |
| Australia | AGDH—OzFoodNet | Open documents repository | Foodborne diseases’ surveillance |
| |
| Australia | Safefish—National Ciguatera Fish Poisoning Research Strategy | Open documents repository | Risk mitigation information |
| [ |
| Australia | Sydney Fish Market | Open documents repository | Seafood handling guidelines (incl. CFP) |
| [ |
| Cook Islands | Cook Islands Ministry of Health/Te Marae Ora | Open documents repository | Cases statistics 2000–2016 (by year & month) |
| [ |
| Fiji | Ministry of Health and Medical Services of Fiji | Open documents repository | Outbreak response guidelines |
| [ |
| French Polynesia | Institut Louis Malardé—Ciguatera website | Open documents repository, public database and maps | General information, Ciguateric fish species, epidemiology mapping, surveillance and statistics, various documents |
| [ |
| New Zealand | New Zealand Ministry of Health/Institute of Environmental Science and Research Ltd. (ESR)/Public Health Surveillance | Open documents repository | Outbreaks occurrence at annual and monthly basis |
| [ |
| South Pacific | Pacific Community/South Pacific Epidemiological and Health Information Services (SPEHIS) | Open documents repository | Epidemiology, health data (years: 1974–1996) |
| [ |
| Hong Kong | The Government of the Hong Kong special administrative region—Center for Food Safety | Open documents repository | General information, code of practice |
| [ |
| Hong Kong | The Government of the Hong Kong special administrative region—Department of Health | Open documents repository | Annual case reports, press releases |
| [ |
(1) All links accessed on 25 September 2021. (2) “PW” indicates absent/broken/obsolete links in referenced works retrieved/updated by the present work.
Types and total instances of open data sources identified in the 33 selected articles (refer to Table 3 for details).
| Open Data Source Type | Total Instances |
|---|---|
| Open documents repository | 22 |
| Public database | 22 |
| Open data portal | 15 |
| Public maps | 12 |
| Public/open source software | 5 |
| Open access journal | 1 |