Literature DB >> 34677713

Transcriptome-based identification and expression profiling of AP2/ERF members in Caragana intermedia and functional analysis of CiDREB3.

Kun Liu1,2, Qi Yang2, Tianrui Yang2, Feiyun Yang2,3, Ruigang Wang2, Jingyu Cong4, Guojing Li5.   

Abstract

BACKGROUND: The AP2/ERF transcription factor family plays important roles in regulation of plant growth and development as well as the response of plants to stress. However, there are currently few studies focusing on the function of the AP2/ERF-type transcription factors in Caragana intermedia Kuang et H. C. Fu. Here, the expression pattern of AP2/ERF transcription factors family in different tissues and under four stress treatments were evaluated, and the function of CiDREB3 was examined. METHODS AND
RESULTS: In this study, the genes encoding the AP2/ERF family of transcription factors were screened from the C. intermedia drought transcriptome database and subjected to bioinformatic analysis using the online tool and software. The expression pattern of the members of AP2/ERF transcription factors in C. intermedia were detected via quantitative real-time PCR (qRT-PCR). The function of CiDREB3 on growth, development and drought tolerance was evaluated by transgenic Arabidopsis. As a result, 22 sequences with complete ORFs were obtained and all sequences were divided into 13 sub-groups. Most of the AP2/ERF transcription factors exhibited tissue-specific expression and were induced by cold, heat, NaCl and mannitol treatments. Furthermore, heterologous expression of CiDREB3 altered the morphology of the transgenic Arabidopsis thaliana L. Heynh and improved its drought tolerance during seedlings development.
CONCLUSIONS: Taken together, the results of the present study helped to better understand the function of the AP2/ERF family transcription factors in response to multiple abiotic stresses and uncovered the role of CiDREB3 in affecting the morphology and abiotic stress tolerance of Arabidopsis.
© 2021. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  AP2/ERF; Abiotic stresses; Caragana intermedia; DREB3; Expression profiling; Transgenic Arabidopsis

Mesh:

Substances:

Year:  2021        PMID: 34677713     DOI: 10.1007/s11033-021-06826-8

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  43 in total

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Authors:  Gang-Ping Xue
Journal:  Nucleic Acids Res       Date:  2002-08-01       Impact factor: 16.971

2.  A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA.

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3.  Genome-wide analysis of AP2/ERF transcription factors in carrot (Daucus carota L.) reveals evolution and expression profiles under abiotic stress.

Authors:  Meng-Yao Li; Zhi-Sheng Xu; Ying Huang; Chang Tian; Feng Wang; Ai-Sheng Xiong
Journal:  Mol Genet Genomics       Date:  2015-05-14       Impact factor: 3.291

4.  The AP2 domain of APETALA2 defines a large new family of DNA binding proteins in Arabidopsis.

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Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-24       Impact factor: 11.205

5.  DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression.

Authors:  Yoh Sakuma; Qiang Liu; Joseph G Dubouzet; Hiroshi Abe; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  Biochem Biophys Res Commun       Date:  2002-01-25       Impact factor: 3.575

6.  Genome-wide analysis of the ERF gene family in Arabidopsis and rice.

Authors:  Toshitsugu Nakano; Kaoru Suzuki; Tatsuhito Fujimura; Hideaki Shinshi
Journal:  Plant Physiol       Date:  2006-01-11       Impact factor: 8.340

7.  Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.

Authors:  Telma E Scarpeci; Vanesa S Frea; María I Zanor; Estela M Valle
Journal:  J Exp Bot       Date:  2017-01-01       Impact factor: 6.992

8.  Ethylene-inducible DNA binding proteins that interact with an ethylene-responsive element.

Authors:  M Ohme-Takagi; H Shinshi
Journal:  Plant Cell       Date:  1995-02       Impact factor: 11.277

9.  Control of Arabidopsis flower and seed development by the homeotic gene APETALA2.

Authors:  K D Jofuku; B G den Boer; M Van Montagu; J K Okamuro
Journal:  Plant Cell       Date:  1994-09       Impact factor: 11.277

10.  Switchgrass PvDREB1C plays opposite roles in plant cold and salt tolerance in transgenic tobacco.

Authors:  Wuwu Wen; Zheni Xie; Guohui Yu; Chengliang Zhao; Jing Zhang; Linkai Huang; Bin Xu; Bingru Huang
Journal:  Hereditas       Date:  2017-10-24       Impact factor: 3.271

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