Literature DB >> 34676290

Modeling Pathogenic Variants in the RNA Exosome.

Julia de Amorim1,2, Anne Slavotinek3, Milo B Fasken1, Anita H Corbett1, Derrick J Morton4,5.   

Abstract

Exosomopathies are a collection of rare diseases caused by mutations in genes that encode structural subunits of the RNA exosome complex (EXOSC). The RNA exosome is critical for both processing and degrading many RNA targets. Mutations in individual RNA exosome subunit genes (termed EXOSC genes) are linked to a variety of distinct diseases. These exosomopathies do not arise from homozygous loss-of-function or large deletions in the EXOSC genes likely because some level of RNA exosome activity is essential for viability. Thus, all patients described so far have at least one allele with a missense mutation encoding an RNA exosome subunit with a single pathogenic amino acid change linked to disease. Understanding how these changes lead to the disparate clinical presentations that have been reported for this class of diseases necessitates investigation of how individual pathogenic missense variants alter RNA exosome function. Such studies will require access to patient samples, a challenge for these very rare diseases, coupled with modeling the patient variants. Here, we highlight five recent studies that model pathogenic variants in EXOSC3, EXOSC2, and EXOSC5.

Entities:  

Keywords:  EXOSC2; EXOSC3; EXOSC5; Pontocerebellar Hypoplasia; RNA exosome; exosomopathies

Year:  2020        PMID: 34676290      PMCID: PMC8528344     

Source DB:  PubMed          Journal:  RNA Dis        ISSN: 2375-2467


  52 in total

1.  The RNA Exosome and Human Disease.

Authors:  Milo B Fasken; Derrick J Morton; Emily G Kuiper; Stephanie K Jones; Sara W Leung; Anita H Corbett
Journal:  Methods Mol Biol       Date:  2020

2.  RNA exosome depletion reveals transcription upstream of active human promoters.

Authors:  Pascal Preker; Jesper Nielsen; Susanne Kammler; Søren Lykke-Andersen; Marianne S Christensen; Christophe K Mapendano; Mikkel H Schierup; Torben Heick Jensen
Journal:  Science       Date:  2008-12-04       Impact factor: 47.728

Review 3.  The cells and molecules that make a cerebellum.

Authors:  D Goldowitz; K Hamre
Journal:  Trends Neurosci       Date:  1998-09       Impact factor: 13.837

4.  Biallelic variants in the RNA exosome gene EXOSC5 are associated with developmental delays, short stature, cerebellar hypoplasia and motor weakness.

Authors:  Anne Slavotinek; Doriana Misceo; Stephanie Htun; Linda Mathisen; Eirik Frengen; Michelle Foreman; Jennifer E Hurtig; Liz Enyenihi; Maria C Sterrett; Sara W Leung; Dina Schneidman-Duhovny; Juvianee Estrada-Veras; Jacque L Duncan; Charlotte A Haaxma; Erik-Jan Kamsteeg; Vivian Xia; Daniah Beleford; Yue Si; Ganka Douglas; Hans Einar Treidene; Ambro van Hoof; Milo B Fasken; Anita H Corbett
Journal:  Hum Mol Genet       Date:  2020-08-03       Impact factor: 6.150

5.  A Two-Layered Targeting Mechanism Underlies Nuclear RNA Sorting by the Human Exosome.

Authors:  Guifen Wu; Manfred Schmid; Leonor Rib; Patrik Polak; Nicola Meola; Albin Sandelin; Torben Heick Jensen
Journal:  Cell Rep       Date:  2020-02-18       Impact factor: 9.995

6.  Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex.

Authors:  Debora Lika Makino; Marc Baumgärtner; Elena Conti
Journal:  Nature       Date:  2013-02-03       Impact factor: 49.962

7.  Genetic and genomic studies of pathogenic EXOSC2 mutations in the newly described disease SHRF implicate the autophagy pathway in disease pathogenesis.

Authors:  Xue Yang; Vafa Bayat; Nataliya DiDonato; Yang Zhao; Brian Zarnegar; Zurab Siprashvili; Vanessa Lopez-Pajares; Tao Sun; Shiying Tao; Chenjian Li; Andreas Rump; Paul Khavari; Bingwei Lu
Journal:  Hum Mol Genet       Date:  2020-03-13       Impact factor: 6.150

8.  The fruit fly at the interface of diagnosis and pathogenic mechanisms of rare and common human diseases.

Authors:  Hugo J Bellen; Michael F Wangler; Shinya Yamamoto
Journal:  Hum Mol Genet       Date:  2019-11-21       Impact factor: 5.121

9.  MPP6 is an exosome-associated RNA-binding protein involved in 5.8S rRNA maturation.

Authors:  Geurt Schilders; Reinout Raijmakers; Jos M H Raats; Ger J M Pruijn
Journal:  Nucleic Acids Res       Date:  2005-12-07       Impact factor: 16.971

Review 10.  The RNA exosome and RNA exosome-linked disease.

Authors:  Derrick J Morton; Emily G Kuiper; Stephanie K Jones; Sara W Leung; Anita H Corbett; Milo B Fasken
Journal:  RNA       Date:  2017-11-01       Impact factor: 4.942

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  1 in total

Review 1.  Nuclear RNA Exosome and Pervasive Transcription: Dual Sculptors of Genome Function.

Authors:  Koichi Ogami; Hiroshi I Suzuki
Journal:  Int J Mol Sci       Date:  2021-12-13       Impact factor: 5.923

  1 in total

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