Literature DB >> 34673212

Meta-analysis for association of TNFA-308(G > A) SNP with vitiligo susceptibility.

Prashant S Giri1, Rasheedunnisa Begum2, Mitesh Dwivedi3.   

Abstract

Vitiligo is an autoimmune progressive skin depigmenting disease. Tumor necrosis factor alpha (TNF-α) is a pro-inflammatory cytokine and plays a crucial role in vitiligo development. Since there are conflicting results and consensus is lacking for the association of the TNFA gene -308 G > A polymorphism with vitiligo susceptibility; we performed a meta-analysis of all the available studies to investigate the association of TNFA -308 G > A polymorphism with vitiligo risk. 11 studies involving 2199 vitiligo patients and 3083 controls were included in the meta-analysis. The meta-analysis revealed an increased vitiligo risk with "AA", "GA" and "AA" + "GA" genotypes and 'A' allele in the overall (p = 0.006, p = 0.003, p = 0.001 & p = 0.003) and Egyptian populations (p = 0.001, p < 0.00001, p < 0.00001 & p = 0.002). Moreover, we found association for "GA" and "AA" + "GA" genotypes in Asian population (p = 0.0009 & p = 0.005) and for 'A' allele in Asian and middle eastern populations (p = 0.04 & p = 0.0002). Interestingly the disease activity based analysis revealed significant association for "GA", "AA" + "GA" genotypes and 'A' allele with active vitiligo patients in the North American population (p = 0.02). Moreover, we found significant association for "GA", "AA" + "GA" genotypes and 'A' allele with localized vitiligo in overall (p = 0.02, p = 0.02 & p = 0.04) and Asian (p = 0.004, p = 0.003 & p = 0.01) populations. Overall, our meta-analysis suggests the involvement of susceptible 'A' allele with: i) vitiligo susceptibility in overall population and specifically with Asian, Middle Eastern and Egyptian populations; ii) vitiligo disease activity in North American population and iii) localized vitiligo in overall population and specifically in Asian population.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Meta-analysis; Single nucleotide polymorphism (SNP); TNFA-308(G>A), rs1800629; Tumor necrosis factor-α (TNF-α); Vitiligo

Mesh:

Substances:

Year:  2021        PMID: 34673212     DOI: 10.1016/j.gene.2021.146027

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  5 in total

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2.  A comprehensive meta-analysis and prioritization study to identify vitiligo associated coding and non-coding SNV candidates using web-based bioinformatics tools.

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3.  Gene polymorphisms and serum levels of BDNF and CRH in vitiligo patients.

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Journal:  PLoS One       Date:  2022-07-29       Impact factor: 3.752

4.  Decreased GZMB, NRP1, ITPR1, and SERPINB9 Transcripts Lead to Reduced Regulatory T Cells Suppressive Capacity in Generalized Vitiligo Patients.

Authors:  Prashant S Giri; Ankit H Bharti; Mitesh Dwivedi
Journal:  J Immunol Res       Date:  2022-09-15       Impact factor: 4.493

Review 5.  Meta-Analysis of Alterations in Regulatory T Cells' Frequency and Suppressive Capacity in Patients with Vitiligo.

Authors:  Prashant S Giri; Jahanvi Mistry; Mitesh Dwivedi
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  5 in total

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