Literature DB >> 34666526

Phase transitions in biology: from bird flocks to population dynamics.

Elleard F W Heffern1, Holly Huelskamp1, Sonya Bahar2, R Fredrik Inglis1.   

Abstract

Phase transitions are an important and extensively studied concept in physics. The insights derived from understanding phase transitions in physics have recently and successfully been applied to a number of different phenomena in biological systems. Here, we provide a brief review of phase transitions and their role in explaining biological processes ranging from collective behaviour in animal flocks to neuronal firing. We also highlight a new and exciting area where phase transition theory is particularly applicable: population collapse and extinction. We discuss how phase transition theory can give insight into a range of extinction events such as population decline due to climate change or microbial responses to stressors such as antibiotic treatment.

Entities:  

Keywords:  criticality; extinction; microbial evolution; population collapse; tipping point

Mesh:

Year:  2021        PMID: 34666526      PMCID: PMC8527202          DOI: 10.1098/rspb.2021.1111

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  88 in total

1.  Nonequilibrium phase transitions in a model for the origin of life.

Authors:  Claudia P Ferreira; J F Fontanari
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2002-01-11

2.  Directed percolation criticality in turbulent liquid crystals.

Authors:  Kazumasa A Takeuchi; Masafumi Kuroda; Hugues Chaté; Masaki Sano
Journal:  Phys Rev Lett       Date:  2007-12-05       Impact factor: 9.161

3.  Criticality and the onset of ordering in the standard Vicsek model.

Authors:  Gabriel Baglietto; Ezequiel V Albano; Julián Candia
Journal:  Interface Focus       Date:  2012-07-04       Impact factor: 3.906

4.  Yeast translational response to high salinity: global analysis reveals regulation at multiple levels.

Authors:  Daniel Melamed; Lilach Pnueli; Yoav Arava
Journal:  RNA       Date:  2008-05-21       Impact factor: 4.942

5.  Ecological communities with Lotka-Volterra dynamics.

Authors:  Guy Bunin
Journal:  Phys Rev E       Date:  2017-04-28       Impact factor: 2.529

Review 6.  Defaunation in the Anthropocene.

Authors:  Rodolfo Dirzo; Hillary S Young; Mauro Galetti; Gerardo Ceballos; Nick J B Isaac; Ben Collen
Journal:  Science       Date:  2014-07-25       Impact factor: 47.728

7.  Evolutionary rescue and adaptation to abrupt environmental change depends upon the history of stress.

Authors:  Andrew Gonzalez; Graham Bell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-19       Impact factor: 6.237

8.  Flocking transitions in confluent tissues.

Authors:  Fabio Giavazzi; Matteo Paoluzzi; Marta Macchi; Dapeng Bi; Giorgio Scita; M Lisa Manning; Roberto Cerbino; M Cristina Marchetti
Journal:  Soft Matter       Date:  2018-05-09       Impact factor: 3.679

9.  A fluid-to-solid jamming transition underlies vertebrate body axis elongation.

Authors:  Alessandro Mongera; Payam Rowghanian; Hannah J Gustafson; Elijah Shelton; David A Kealhofer; Emmet K Carn; Friedhelm Serwane; Adam A Lucio; James Giammona; Otger Campàs
Journal:  Nature       Date:  2018-09-05       Impact factor: 49.962

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