Literature DB >> 34663986

Distinction of lymphoid and myeloid clonal hematopoiesis.

Abhishek Niroula1,2,3, Aswin Sekar2, Mark A Murakami2, Mark Trinder1,4, Mridul Agrawal2, Waihay J Wong1,5, Alexander G Bick1,6, Md Mesbah Uddin1,7, Christopher J Gibson1,2, Gabriel K Griffin1,5, Michael C Honigberg1,8, Seyedeh M Zekavat1,9, Kaavya Paruchuri1,7,8,10, Pradeep Natarajan1,7,10, Benjamin L Ebert11,12,13.   

Abstract

Clonal hematopoiesis (CH) results from somatic genomic alterations that drive clonal expansion of blood cells. Somatic gene mutations associated with hematologic malignancies detected in hematopoietic cells of healthy individuals, referred to as CH of indeterminate potential (CHIP), have been associated with myeloid malignancies, while mosaic chromosomal alterations (mCAs) have been associated with lymphoid malignancies. Here, we analyzed CHIP in 55,383 individuals and autosomal mCAs in 420,969 individuals with no history of hematologic malignancies in the UK Biobank and Mass General Brigham Biobank. We distinguished myeloid and lymphoid somatic gene mutations, as well as myeloid and lymphoid mCAs, and found both to be associated with risk of lineage-specific hematologic malignancies. Further, we performed an integrated analysis of somatic alterations with peripheral blood count parameters to stratify the risk of incident myeloid and lymphoid malignancies. These genetic alterations can be readily detected in clinical sequencing panels and used with blood count parameters to identify individuals at high risk of developing hematologic malignancies.
© 2021. The Author(s), under exclusive licence to Springer Nature America, Inc.

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Year:  2021        PMID: 34663986      PMCID: PMC8621497          DOI: 10.1038/s41591-021-01521-4

Source DB:  PubMed          Journal:  Nat Med        ISSN: 1078-8956            Impact factor:   53.440


  52 in total

1.  Clonal hematopoiesis of indeterminate potential and its distinction from myelodysplastic syndromes.

Authors:  David P Steensma; Rafael Bejar; Siddhartha Jaiswal; R Coleman Lindsley; Mikkael A Sekeres; Robert P Hasserjian; Benjamin L Ebert
Journal:  Blood       Date:  2015-04-30       Impact factor: 22.113

Review 2.  Insights into clonal hematopoiesis and its relation to cancer risk.

Authors:  Shaneice R Mitchell; Jayakrishnan Gopakumar; Siddhartha Jaiswal
Journal:  Curr Opin Genet Dev       Date:  2021-01-07       Impact factor: 5.578

3.  Somatic mutations precede acute myeloid leukemia years before diagnosis.

Authors:  Pinkal Desai; Nuria Mencia-Trinchant; Oleksandr Savenkov; Michael S Simon; Gloria Cheang; Sangmin Lee; Michael Samuel; Ellen K Ritchie; Monica L Guzman; Karla V Ballman; Gail J Roboz; Duane C Hassane
Journal:  Nat Med       Date:  2018-07-09       Impact factor: 53.440

4.  Age-related clonal hematopoiesis associated with adverse outcomes.

Authors:  Siddhartha Jaiswal; Pierre Fontanillas; Jason Flannick; Alisa Manning; Peter V Grauman; Brenton G Mar; R Coleman Lindsley; Craig H Mermel; Noel Burtt; Alejandro Chavez; John M Higgins; Vladislav Moltchanov; Frank C Kuo; Michael J Kluk; Brian Henderson; Leena Kinnunen; Heikki A Koistinen; Claes Ladenvall; Gad Getz; Adolfo Correa; Benjamin F Banahan; Stacey Gabriel; Sekar Kathiresan; Heather M Stringham; Mark I McCarthy; Michael Boehnke; Jaakko Tuomilehto; Christopher Haiman; Leif Groop; Gil Atzmon; James G Wilson; Donna Neuberg; David Altshuler; Benjamin L Ebert
Journal:  N Engl J Med       Date:  2014-11-26       Impact factor: 91.245

5.  Clonal hematopoiesis and blood-cancer risk inferred from blood DNA sequence.

Authors:  Giulio Genovese; Anna K Kähler; Robert E Handsaker; Johan Lindberg; Samuel A Rose; Samuel F Bakhoum; Kimberly Chambert; Eran Mick; Benjamin M Neale; Menachem Fromer; Shaun M Purcell; Oscar Svantesson; Mikael Landén; Martin Höglund; Sören Lehmann; Stacey B Gabriel; Jennifer L Moran; Eric S Lander; Patrick F Sullivan; Pamela Sklar; Henrik Grönberg; Christina M Hultman; Steven A McCarroll
Journal:  N Engl J Med       Date:  2014-11-26       Impact factor: 91.245

Review 6.  Clonal hematopoiesis in human aging and disease.

Authors:  Siddhartha Jaiswal; Benjamin L Ebert
Journal:  Science       Date:  2019-11-01       Impact factor: 47.728

7.  Age-related mutations associated with clonal hematopoietic expansion and malignancies.

Authors:  Mingchao Xie; Charles Lu; Jiayin Wang; Michael D McLellan; Kimberly J Johnson; Michael C Wendl; Joshua F McMichael; Heather K Schmidt; Venkata Yellapantula; Christopher A Miller; Bradley A Ozenberger; John S Welch; Daniel C Link; Matthew J Walter; Elaine R Mardis; John F Dipersio; Feng Chen; Richard K Wilson; Timothy J Ley; Li Ding
Journal:  Nat Med       Date:  2014-10-19       Impact factor: 53.440

8.  Prediction of acute myeloid leukaemia risk in healthy individuals.

Authors:  Sagi Abelson; Grace Collord; Stanley W K Ng; Omer Weissbrod; Netta Mendelson Cohen; Elisabeth Niemeyer; Noam Barda; Philip C Zuzarte; Lawrence Heisler; Yogi Sundaravadanam; Robert Luben; Shabina Hayat; Ting Ting Wang; Zhen Zhao; Iulia Cirlan; Trevor J Pugh; David Soave; Karen Ng; Calli Latimer; Claire Hardy; Keiran Raine; David Jones; Diana Hoult; Abigail Britten; John D McPherson; Mattias Johansson; Faridah Mbabaali; Jenna Eagles; Jessica K Miller; Danielle Pasternack; Lee Timms; Paul Krzyzanowski; Philip Awadalla; Rui Costa; Eran Segal; Scott V Bratman; Philip Beer; Sam Behjati; Inigo Martincorena; Jean C Y Wang; Kristian M Bowles; J Ramón Quirós; Anna Karakatsani; Carlo La Vecchia; Antonia Trichopoulou; Elena Salamanca-Fernández; José M Huerta; Aurelio Barricarte; Ruth C Travis; Rosario Tumino; Giovanna Masala; Heiner Boeing; Salvatore Panico; Rudolf Kaaks; Alwin Krämer; Sabina Sieri; Elio Riboli; Paolo Vineis; Matthieu Foll; James McKay; Silvia Polidoro; Núria Sala; Kay-Tee Khaw; Roel Vermeulen; Peter J Campbell; Elli Papaemmanuil; Mark D Minden; Amos Tanay; Ran D Balicer; Nicholas J Wareham; Moritz Gerstung; John E Dick; Paul Brennan; George S Vassiliou; Liran I Shlush
Journal:  Nature       Date:  2018-07-09       Impact factor: 49.962

9.  Monogenic and polygenic inheritance become instruments for clonal selection.

Authors:  Po-Ru Loh; Giulio Genovese; Steven A McCarroll
Journal:  Nature       Date:  2020-06-24       Impact factor: 49.962

10.  Insights into clonal haematopoiesis from 8,342 mosaic chromosomal alterations.

Authors:  Po-Ru Loh; Giulio Genovese; Robert E Handsaker; Hilary K Finucane; Yakir A Reshef; Pier Francesco Palamara; Brenda M Birmann; Michael E Talkowski; Samuel F Bakhoum; Steven A McCarroll; Alkes L Price
Journal:  Nature       Date:  2018-07-11       Impact factor: 49.962

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  11 in total

Review 1.  Clonal Hematopoiesis: Role in Hematologic and Non-Hematologic Malignancies.

Authors:  Ugo Testa; Germana Castelli; Elvira Pelosi
Journal:  Mediterr J Hematol Infect Dis       Date:  2022-09-01       Impact factor: 3.122

Review 2.  [Importance of clonal hematopoiesis for hematologic neoplasms].

Authors:  Katharina S Götze; Claudia Lengerke
Journal:  Inn Med (Heidelb)       Date:  2022-09-20

3.  Clonal Hematopoiesis and CKD Progression.

Authors:  Abhishek Niroula; Roger Belizaire
Journal:  J Am Soc Nephrol       Date:  2022-04-06       Impact factor: 14.978

Review 4.  Clonal hematopoiesis and vascular disease.

Authors:  Kaushik Amancherla; John A Wells; Alexander G Bick
Journal:  Semin Immunopathol       Date:  2022-02-04       Impact factor: 11.759

5.  The Dynamics of Nucleotide Variants in the Progression from Low-Intermediate Myeloma Precursor Conditions to Multiple Myeloma: Studying Serial Samples with a Targeted Sequencing Approach.

Authors:  Bénedith Oben; Charlotte Cosemans; Ellen Geerdens; Loes Linsen; Kimberly Vanhees; Brigitte Maes; Koen Theunissen; Bert Cruys; Marta Lionetti; Ingrid Arijs; Niccolò Bolli; Guy Froyen; Jean-Luc Rummens
Journal:  Cancers (Basel)       Date:  2022-02-18       Impact factor: 6.639

Review 6.  Increasing Complexity of Molecular Landscapes in Human Hematopoietic Stem and Progenitor Cells during Development and Aging.

Authors:  Suzanne M Watt; Peng Hua; Irene Roberts
Journal:  Int J Mol Sci       Date:  2022-03-27       Impact factor: 5.923

7.  Oncogenic Mutations and Tumor Microenvironment Alterations of Older Patients With Diffuse Large B-Cell Lymphoma.

Authors:  Yue Zhu; Di Fu; Qing Shi; Ziyang Shi; Lei Dong; Hongmei Yi; Zhenhua Liu; Yan Feng; Qian Liu; Hai Fang; Shu Cheng; Li Wang; Qiang Tian; Pengpeng Xu; Weili Zhao
Journal:  Front Immunol       Date:  2022-03-25       Impact factor: 7.561

8.  Genetics of smoking and risk of clonal hematopoiesis.

Authors:  Michael G Levin; Tetsushi Nakao; Seyedeh M Zekavat; Satoshi Koyama; Alexander G Bick; Abhishek Niroula; Benjamin Ebert; Scott M Damrauer; Pradeep Natarajan
Journal:  Sci Rep       Date:  2022-05-04       Impact factor: 4.996

Review 9.  Clinical Significance of Clonal Hematopoiesis of Indeterminate Potential in Hematology and Cardiovascular Disease.

Authors:  Gregor Hoermann
Journal:  Diagnostics (Basel)       Date:  2022-07-02

10.  Genome-wide analyses of 200,453 individuals yield new insights into the causes and consequences of clonal hematopoiesis.

Authors:  Siddhartha P Kar; Pedro M Quiros; Muxin Gu; Tao Jiang; Jonathan Mitchell; Ryan Langdon; Vivek Iyer; Clea Barcena; M S Vijayabaskar; Margarete A Fabre; Paul Carter; Slavé Petrovski; Stephen Burgess; George S Vassiliou
Journal:  Nat Genet       Date:  2022-07-14       Impact factor: 41.307

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