Literature DB >> 34661201

Over-and-Under Complete Convolutional RNN for MRI Reconstruction.

Pengfei Guo1, Jeya Maria Jose Valanarasu2, Puyang Wang2, Jinyuan Zhou3, Shanshan Jiang3, Vishal M Patel1,2.   

Abstract

Reconstructing magnetic resonance (MR) images from under-sampled data is a challenging problem due to various artifacts introduced by the under-sampling operation. Recent deep learning-based methods for MR image reconstruction usually leverage a generic auto-encoder architecture which captures low-level features at the initial layers and high-level features at the deeper layers. Such networks focus much on global features which may not be optimal to reconstruct the fully-sampled image. In this paper, we propose an Over-and-Under Complete Convolutional Recurrent Neural Network (OUCR), which consists of an overcomplete and an undercomplete Convolutional Recurrent Neural Network (CRNN). The overcomplete branch gives special attention in learning local structures by restraining the receptive field of the network. Combining it with the undercomplete branch leads to a network which focuses more on low-level features without losing out on the global structures. Extensive experiments on two datasets demonstrate that the proposed method achieves significant improvements over the compressed sensing and popular deep learning-based methods with less number of trainable parameters.

Entities:  

Keywords:  Convolutional RNN; Deep learning; MRI reconstruction

Year:  2021        PMID: 34661201      PMCID: PMC8517933          DOI: 10.1007/978-3-030-87231-1_2

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  19 in total

1.  SENSE: sensitivity encoding for fast MRI.

Authors:  K P Pruessmann; M Weiger; M B Scheidegger; P Boesiger
Journal:  Magn Reson Med       Date:  1999-11       Impact factor: 4.668

2.  Accelerating SENSE using compressed sensing.

Authors:  Dong Liang; Bo Liu; Jiunjie Wang; Leslie Ying
Journal:  Magn Reson Med       Date:  2009-12       Impact factor: 4.668

3.  Gradient-based image recovery methods from incomplete Fourier measurements.

Authors:  Vishal M Patel; Ray Maleh; Anna C Gilbert; Rama Chellappa
Journal:  IEEE Trans Image Process       Date:  2011-06-16       Impact factor: 10.856

4.  Improving synthesis and analysis prior blind compressed sensing with low-rank constraints for dynamic MRI reconstruction.

Authors:  Angshul Majumdar
Journal:  Magn Reson Imaging       Date:  2014-08-29       Impact factor: 2.546

5.  Lesion Mask-Based Simultaneous Synthesis of Anatomic and Molecular MR Images Using a GAN.

Authors:  Pengfei Guo; Puyang Wang; Jinyuan Zhou; Vishal M Patel; Shanshan Jiang
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

6.  A Deep Cascade of Convolutional Neural Networks for Dynamic MR Image Reconstruction.

Authors:  Jo Schlemper; Jose Caballero; Joseph V Hajnal; Anthony N Price; Daniel Rueckert
Journal:  IEEE Trans Med Imaging       Date:  2017-10-13       Impact factor: 10.048

7.  fastMRI: A Publicly Available Raw k-Space and DICOM Dataset of Knee Images for Accelerated MR Image Reconstruction Using Machine Learning.

Authors:  Florian Knoll; Jure Zbontar; Anuroop Sriram; Matthew J Muckley; Mary Bruno; Aaron Defazio; Marc Parente; Krzysztof J Geras; Joe Katsnelson; Hersh Chandarana; Zizhao Zhang; Michal Drozdzalv; Adriana Romero; Michael Rabbat; Pascal Vincent; James Pinkerton; Duo Wang; Nafissa Yakubova; Erich Owens; C Lawrence Zitnick; Michael P Recht; Daniel K Sodickson; Yvonne W Lui
Journal:  Radiol Artif Intell       Date:  2020-01-29

Review 8.  A perspective on K-space.

Authors:  R Mezrich
Journal:  Radiology       Date:  1995-05       Impact factor: 11.105

9.  Scan-specific robust artificial-neural-networks for k-space interpolation (RAKI) reconstruction: Database-free deep learning for fast imaging.

Authors:  Mehmet Akçakaya; Steen Moeller; Sebastian Weingärtner; Kâmil Uğurbil
Journal:  Magn Reson Med       Date:  2018-09-18       Impact factor: 4.668

10.  Anatomic and Molecular MR Image Synthesis Using Confidence Guided CNNs.

Authors:  Pengfei Guo; Puyang Wang; Rajeev Yasarla; Jinyuan Zhou; Vishal M Patel; Shanshan Jiang
Journal:  IEEE Trans Med Imaging       Date:  2021-09-30       Impact factor: 11.037

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  1 in total

1.  A review and experimental evaluation of deep learning methods for MRI reconstruction.

Authors:  Arghya Pal; Yogesh Rathi
Journal:  J Mach Learn Biomed Imaging       Date:  2022-03-11
  1 in total

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