Literature DB >> 34655310

MRI-based radiomics signature and clinical factor for predicting H3K27M mutation in pediatric high-grade gliomas located in the midline of the brain.

Chenqing Wu1, Hui Zheng1, Jinning Li1, Yuzhen Zhang1, Shaofeng Duan2, Yuhua Li1, Dengbin Wang3.   

Abstract

OBJECTIVE: To develop a nomogram based on MRI radiomics and clinical features for preoperatively predicting H3K27M mutation in pediatric high-grade gliomas (pHGGs) with a midline location of the brain.
METHODS: The institutional database was reviewed to identify patients with pHGGs with a midline location of the brain who underwent tumor biopsy with preoperative MRI scans between June 2016 and June 2021. A total of 107 patients with pHGGs, including 79 patients with H3K27M mutation, were consecutively included and randomly divided into training and test sets. Radiomics features were extracted from fluid-attenuated inversion recovery (FLAIR), diffusion-weighted (DW) and post-contrast T1-weighted images, and apparent diffusion coefficient (ADC) maps. The minimum redundancy maximum relevance (MRMR) and least absolute shrinkage and selection operator (LASSO) logistic regression were performed for radiomics signature construction. Clinical and radiological features were analyzed to select clinical predictors. A nomogram was then developed by incorporating the radiomics signature and selected clinical predictors.
RESULTS: Nine radiomics features were selected to construct the radiomics signature, which showed a favorable discriminatory ability in training and test sets with an area under the curve (AUC) of 0.95 and 0.92, respectively. Ring enhancement was identified as an independent clinical predictor (p < 0.01). The nomogram, constructed with radiomics signature and ring enhancement, showed good calibration and discrimination in training and testing sets (AUC: 0.95 and 0.90 respectively).
CONCLUSIONS: The nomogram which combined radiomics signature and ring enhancement had a satisfactory ability to predict H3K27M mutation in pHGGs with a midline of the brain. KEY POINTS: • Conventional MRI features were not powerful enough to predict H3K27M mutation status in pediatric high-grade gliomas (pHGGs) with a midline location of the brain. • An MRI-based radiomics signature showed satisfactory ability to predict H3K27M mutation status of pHGGs located in the midline of the brain. • Associating the radiomics signature with clinical factors improved predictive performance.
© 2021. European Society of Radiology.

Entities:  

Keywords:  Apparent diffusion coefficient; Multiparametric magnetic resonance imaging; Pediatric high-grade gliomas (pHGGs) with a midline location; Radiogenomics

Mesh:

Year:  2021        PMID: 34655310     DOI: 10.1007/s00330-021-08234-9

Source DB:  PubMed          Journal:  Eur Radiol        ISSN: 0938-7994            Impact factor:   7.034


  39 in total

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Journal:  Acta Neuropathol       Date:  2018-03-01       Impact factor: 17.088

Review 2.  The 2016 World Health Organization Classification of Tumors of the Central Nervous System: a summary.

Authors:  David N Louis; Arie Perry; Guido Reifenberger; Andreas von Deimling; Dominique Figarella-Branger; Webster K Cavenee; Hiroko Ohgaki; Otmar D Wiestler; Paul Kleihues; David W Ellison
Journal:  Acta Neuropathol       Date:  2016-05-09       Impact factor: 17.088

3.  Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq.

Authors:  Mariella G Filbin; Itay Tirosh; Volker Hovestadt; McKenzie L Shaw; Leah E Escalante; Nathan D Mathewson; Cyril Neftel; Nelli Frank; Kristine Pelton; Christine M Hebert; Christine Haberler; Keren Yizhak; Johannes Gojo; Kristof Egervari; Christopher Mount; Peter van Galen; Dennis M Bonal; Quang-De Nguyen; Alexander Beck; Claire Sinai; Thomas Czech; Christian Dorfer; Liliana Goumnerova; Cinzia Lavarino; Angel M Carcaboso; Jaume Mora; Ravindra Mylvaganam; Christina C Luo; Andreas Peyrl; Mara Popović; Amedeo Azizi; Tracy T Batchelor; Matthew P Frosch; Maria Martinez-Lage; Mark W Kieran; Pratiti Bandopadhayay; Rameen Beroukhim; Gerhard Fritsch; Gad Getz; Orit Rozenblatt-Rosen; Kai W Wucherpfennig; David N Louis; Michelle Monje; Irene Slavc; Keith L Ligon; Todd R Golub; Aviv Regev; Bradley E Bernstein; Mario L Suvà
Journal:  Science       Date:  2018-04-20       Impact factor: 47.728

4.  Significance of H3K27M mutation with specific histomorphological features and associated molecular alterations in pediatric high-grade glial tumors.

Authors:  Süheyla Uyar Bozkurt; A Dagcinar; B Tanrikulu; N Comunoglu; B C Meydan; M Ozek; B Oz
Journal:  Childs Nerv Syst       Date:  2017-10-24       Impact factor: 1.475

5.  Imaging Characteristics of Pediatric Diffuse Midline Gliomas with Histone H3 K27M Mutation.

Authors:  M S Aboian; D A Solomon; E Felton; M C Mabray; J E Villanueva-Meyer; S Mueller; S Cha
Journal:  AJNR Am J Neuroradiol       Date:  2017-02-09       Impact factor: 3.825

6.  Diffuse high-grade gliomas with H3 K27M mutations carry a dismal prognosis independent of tumor location.

Authors:  Michael Karremann; Gerrit H Gielen; Marion Hoffmann; Maria Wiese; Niclas Colditz; Monika Warmuth-Metz; Brigitte Bison; Alexander Claviez; Dannis G van Vuurden; André O von Bueren; Marco Gessi; Ingrid Kühnle; Volkmar H Hans; Martin Benesch; Dominik Sturm; Rolf-Dieter Kortmann; Andreas Waha; Torsten Pietsch; Christof M Kramm
Journal:  Neuro Oncol       Date:  2018-01-10       Impact factor: 12.300

7.  K27M mutation in histone H3.3 defines clinically and biologically distinct subgroups of pediatric diffuse intrinsic pontine gliomas.

Authors:  Dong-Anh Khuong-Quang; Pawel Buczkowicz; Patricia Rakopoulos; Xiao-Yang Liu; Adam M Fontebasso; Eric Bouffet; Ute Bartels; Steffen Albrecht; Jeremy Schwartzentruber; Louis Letourneau; Mathieu Bourgey; Guillaume Bourque; Alexandre Montpetit; Genevieve Bourret; Pierre Lepage; Adam Fleming; Peter Lichter; Marcel Kool; Andreas von Deimling; Dominik Sturm; Andrey Korshunov; Damien Faury; David T Jones; Jacek Majewski; Stefan M Pfister; Nada Jabado; Cynthia Hawkins
Journal:  Acta Neuropathol       Date:  2012-06-03       Impact factor: 17.088

8.  Glioma imaging in Europe: A survey of 220 centres and recommendations for best clinical practice.

Authors:  S C Thust; S Heiland; A Falini; H R Jäger; A D Waldman; P C Sundgren; C Godi; V K Katsaros; A Ramos; N Bargallo; M W Vernooij; T Yousry; M Bendszus; M Smits
Journal:  Eur Radiol       Date:  2018-03-13       Impact factor: 5.315

9.  Targeted detection of genetic alterations reveal the prognostic impact of H3K27M and MAPK pathway aberrations in paediatric thalamic glioma.

Authors:  Scott Ryall; Rahul Krishnatry; Anthony Arnoldo; Pawel Buczkowicz; Matthew Mistry; Robert Siddaway; Cino Ling; Sanja Pajovic; Man Yu; Joshua B Rubin; Juliette Hukin; Paul Steinbok; Ute Bartels; Eric Bouffet; Uri Tabori; Cynthia Hawkins
Journal:  Acta Neuropathol Commun       Date:  2016-08-31       Impact factor: 7.801

Review 10.  Radiomics and Artificial Intelligence for Biomarker and Prediction Model Development in Oncology.

Authors:  Reza Forghani; Peter Savadjiev; Avishek Chatterjee; Nikesh Muthukrishnan; Caroline Reinhold; Behzad Forghani
Journal:  Comput Struct Biotechnol J       Date:  2019-07-12       Impact factor: 7.271

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  3 in total

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2.  AI-Driven Image Analysis in Central Nervous System Tumors-Traditional Machine Learning, Deep Learning and Hybrid Models.

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3.  Differences in the MRI Signature and ADC Values of Diffuse Midline Gliomas with H3 K27M Mutation Compared to Midline Glioblastomas.

Authors:  Peter Raab; Rouzbeh Banan; Arash Akbarian; Majid Esmaeilzadeh; Madjid Samii; Amir Samii; Helmut Bertalanffy; Ulrich Lehmann; Joachim K Krauss; Heinrich Lanfermann; Christian Hartmann; Roland Brüning
Journal:  Cancers (Basel)       Date:  2022-03-09       Impact factor: 6.639

  3 in total

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