Literature DB >> 34654170

Diverse communities behave like typical random ecosystems.

Wenping Cui1, Robert Marsland2, Pankaj Mehta2.   

Abstract

In 1972, Robert May triggered a worldwide research program studying ecological communities using random matrix theory. Yet, it remains unclear if and when we can treat real communities as random ecosystems. Here, we draw on recent progress in random matrix theory and statistical physics to extend May's approach to generalized consumer-resource models. We show that in diverse ecosystems adding even modest amounts of noise to consumer preferences results in a transition to "typicality," where macroscopic ecological properties of communities are indistinguishable from those of random ecosystems, even when resource preferences have prominent designed structures. We test these ideas using numerical simulations on a wide variety of ecological models. Our work offers an explanation for the success of random consumer resource models in reproducing experimentally observed ecological patterns in microbial communities and highlights the difficulty of scaling up bottom-up approaches in synthetic ecology to diverse communities.

Entities:  

Year:  2021        PMID: 34654170      PMCID: PMC9005152          DOI: 10.1103/PhysRevE.104.034416

Source DB:  PubMed          Journal:  Phys Rev E        ISSN: 2470-0045            Impact factor:   2.529


  29 in total

1.  Stability criteria for complex ecosystems.

Authors:  Stefano Allesina; Si Tang
Journal:  Nature       Date:  2012-02-19       Impact factor: 49.962

2.  Constraint satisfaction mechanisms for marginal stability and criticality in large ecosystems.

Authors:  Ada Altieri; Silvio Franz
Journal:  Phys Rev E       Date:  2019-01       Impact factor: 2.529

Review 3.  Role of the microbiota in immunity and inflammation.

Authors:  Yasmine Belkaid; Timothy W Hand
Journal:  Cell       Date:  2014-03-27       Impact factor: 41.582

4.  Collective Phase in Resource Competition in a Highly Diverse Ecosystem.

Authors:  Mikhail Tikhonov; Remi Monasson
Journal:  Phys Rev Lett       Date:  2017-01-27       Impact factor: 9.161

5.  Will a large complex system be stable?

Authors:  R M May
Journal:  Nature       Date:  1972-08-18       Impact factor: 49.962

6.  Properties of Equilibria and Glassy Phases of the Random Lotka-Volterra Model with Demographic Noise.

Authors:  Ada Altieri; Felix Roy; Chiara Cammarota; Giulio Biroli
Journal:  Phys Rev Lett       Date:  2021-06-25       Impact factor: 9.161

7.  Community structure follows simple assembly rules in microbial microcosms.

Authors:  Jonathan Friedman; Logan M Higgins; Jeff Gore
Journal:  Nat Ecol Evol       Date:  2017-03-27       Impact factor: 15.460

8.  Effect of Resource Dynamics on Species Packing in Diverse Ecosystems.

Authors:  Wenping Cui; Robert Marsland; Pankaj Mehta
Journal:  Phys Rev Lett       Date:  2020-07-24       Impact factor: 9.161

9.  Feasibility and coexistence of large ecological communities.

Authors:  Jacopo Grilli; Matteo Adorisio; Samir Suweis; György Barabás; Jayanth R Banavar; Stefano Allesina; Amos Maritan
Journal:  Nat Commun       Date:  2017-02-24       Impact factor: 14.919

10.  A minimal model for microbial biodiversity can reproduce experimentally observed ecological patterns.

Authors:  Robert Marsland; Wenping Cui; Pankaj Mehta
Journal:  Sci Rep       Date:  2020-02-24       Impact factor: 4.379

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  3 in total

Review 1.  Ecological modelling approaches for predicting emergent properties in microbial communities.

Authors:  Naomi Iris van den Berg; Daniel Machado; Sophia Santos; Isabel Rocha; Jeremy Chacón; William Harcombe; Sara Mitri; Kiran R Patil
Journal:  Nat Ecol Evol       Date:  2022-05-16       Impact factor: 19.100

2.  Competition for fluctuating resources reproduces statistics of species abundance over time across wide-ranging microbiotas.

Authors:  Po-Yi Ho; Benjamin H Good; Kerwyn Casey Huang
Journal:  Elife       Date:  2022-04-11       Impact factor: 8.713

3.  Stability criteria for the consumption and exchange of essential resources.

Authors:  Theo Gibbs; Yifan Zhang; Zachary R Miller; James P O'Dwyer
Journal:  PLoS Comput Biol       Date:  2022-09-08       Impact factor: 4.779

  3 in total

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