Literature DB >> 34649096

Nanoparticle-assisted detection of nucleic acids in a polymeric nanopore with a large pore size.

Youwen Zhang1, Xiaohan Chen1, Ceming Wang2, Hsueh-Chia Chang2, Xiyun Guan3.   

Abstract

Rapid and accurate detection of nucleic acids is of paramount importance in many fields, including medical diagnosis, gene therapy and virus identification. In this work, by taking advantage of two DNA hybridization probes, one of which was immobilized on the surface of gold nanoparticles, while the other was free in solution, detection of short length nucleic acids was successfully achieved using a large size (20 nm tip diameter) polyethylene terephythalate (PET) nanopore. The sensor was sensitive and selective: DNA samples with concentrations at as low as 0.5 nM could be detected within minutes and the number of mismatches can be discerned from the translocation frequency. Furthermore, the nanopore can be repeatedly used many times. Our developed large-size nanopore sensing platform offers the potential for fieldable/point-of-care diagnostic applications.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Biomarker; DNA; PET film; Solid-state nanopore; Viral RNA

Mesh:

Substances:

Year:  2021        PMID: 34649096      PMCID: PMC8643331          DOI: 10.1016/j.bios.2021.113697

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  57 in total

1.  Nanopore detection of metal ions: Current status and future directions.

Authors:  Golbarg Mohammadi Roozbahani; Xiaohan Chen; Youwen Zhang; Liang Wang; Xiyun Guan
Journal:  Small Methods       Date:  2020-08-09

2.  Limit of blank, limit of detection and limit of quantitation.

Authors:  David A Armbruster; Terry Pry
Journal:  Clin Biochem Rev       Date:  2008-08

Review 3.  Twenty-five years of quantitative PCR for gene expression analysis.

Authors:  Heather D VanGuilder; Kent E Vrana; Willard M Freeman
Journal:  Biotechniques       Date:  2008-04       Impact factor: 1.993

4.  Dissociation and degradation of thiol-modified DNA on gold nanoparticles in aqueous and organic solvents.

Authors:  Nishi Bhatt; Po-Jung Jimmy Huang; Neeshma Dave; Juewen Liu
Journal:  Langmuir       Date:  2011-04-22       Impact factor: 3.882

5.  Resistive amplitude fingerprints during translocation of linear molecules through charged solid-state nanopores.

Authors:  Sebastian Sensale; Ceming Wang; Hsueh-Chia Chang
Journal:  J Chem Phys       Date:  2020-07-21       Impact factor: 3.488

Review 6.  Analysis with biological nanopore: On-pore, off-pore strategies and application in biological fluids.

Authors:  Yunjiao Wang; Youwen Zhang; Xiaohan Chen; Xiyun Guan; Liang Wang
Journal:  Talanta       Date:  2020-09-28       Impact factor: 6.057

7.  A fluorescence-based method for determining the surface coverage and hybridization efficiency of thiol-capped oligonucleotides bound to gold thin films and nanoparticles.

Authors:  L M Demers; C A Mirkin; R C Mucic; R A Reynolds; R L Letsinger; R Elghanian; G Viswanadham
Journal:  Anal Chem       Date:  2000-11-15       Impact factor: 6.986

8.  Rapid fabrication of solid-state nanopores with high reproducibility over a large area using a helium ion microscope.

Authors:  Deying Xia; Chuong Huynh; Shawn McVey; Aaron Kobler; Lewis Stern; Zhishan Yuan; Xinsheng Sean Ling
Journal:  Nanoscale       Date:  2018-03-15       Impact factor: 7.790

9.  Label-Free Detection of DNA Mutations by Nanopore Analysis.

Authors:  Xiaohan Chen; Golbarg M Roozbahani; Zijing Ye; Youwen Zhang; Rui Ma; Jialing Xiang; Xiyun Guan
Journal:  ACS Appl Mater Interfaces       Date:  2018-03-28       Impact factor: 9.229

10.  Peptide-Mediated Nanopore Detection of Uranyl Ions in Aqueous Media.

Authors:  Golbarg M Roozbahani; Xiaohan Chen; Youwen Zhang; Ruiqi Xie; Rui Ma; Dien Li; Huazhong Li; Xiyun Guan
Journal:  ACS Sens       Date:  2017-05-04       Impact factor: 7.711

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