Literature DB >> 34646012

Structural basis of cytokine-mediated activation of ALK family receptors.

Steven De Munck1,2, Mathias Provost1,2, Michiko Kurikawa3, Ikuko Omori3, Junko Mukohyama3, Jan Felix1,2, Yehudi Bloch1,2, Omar Abdel-Wahab4, J Fernando Bazan5, Akihide Yoshimi3, Savvas N Savvides6,7.   

Abstract

Anaplastic lymphoma kinase (ALK)1 and the related leukocyte tyrosine kinase (LTK)2 are recently deorphanized receptor tyrosine kinases3. Together with their activating cytokines, ALKAL1 and ALKAL24-6 (also called FAM150A and FAM150B or AUGβ and AUGα, respectively), they are involved in neural development7, cancer7-9 and autoimmune diseases10. Furthermore, mammalian ALK recently emerged as a key regulator of energy expenditure and weight gain11, consistent with a metabolic role for Drosophila ALK12. Despite such functional pleiotropy and growing therapeutic relevance13,14, structural insights into ALK and LTK and their complexes with cognate cytokines have remained scarce. Here we show that the cytokine-binding segments of human ALK and LTK comprise a novel architectural chimera of a permuted TNF-like module that braces a glycine-rich subdomain featuring a hexagonal lattice of long polyglycine type II helices. The cognate cytokines ALKAL1 and ALKAL2 are monomeric three-helix bundles, yet their binding to ALK and LTK elicits similar dimeric assemblies with two-fold symmetry, that tent a single cytokine molecule proximal to the cell membrane. We show that the membrane-proximal EGF-like domain dictates the apparent cytokine preference of ALK. Assisted by these diverse structure-function findings, we propose a structural and mechanistic blueprint for complexes of ALK family receptors, and thereby extend the repertoire of ligand-mediated dimerization mechanisms adopted by receptor tyrosine kinases.
© 2021. The Author(s), under exclusive licence to Springer Nature Limited.

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Year:  2021        PMID: 34646012      PMCID: PMC9343967          DOI: 10.1038/s41586-021-03959-5

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   69.504


  56 in total

1.  Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7.

Authors:  Gerrit Langer; Serge X Cohen; Victor S Lamzin; Anastassis Perrakis
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

2.  Analysis of ALK, MYCN, and the ALK ligand ALKAL2 (FAM150B/AUGα) in neuroblastoma patient samples with chromosome arm 2p rearrangements.

Authors:  Niloufar Javanmardi; Susanne Fransson; Anna Djos; Ganesh Umapathy; Malin Östensson; Jelena Milosevic; Marcus Borenäs; Bengt Hallberg; Per Kogner; Tommy Martinsson; Ruth H Palmer
Journal:  Genes Chromosomes Cancer       Date:  2019-07-24       Impact factor: 5.006

3.  Crystal structure of the complex of human epidermal growth factor and receptor extracellular domains.

Authors:  Hideo Ogiso; Ryuichiro Ishitani; Osamu Nureki; Shuya Fukai; Mari Yamanaka; Jae-Hoon Kim; Kazuki Saito; Ayako Sakamoto; Mio Inoue; Mikako Shirouzu; Shigeyuki Yokoyama
Journal:  Cell       Date:  2002-09-20       Impact factor: 41.582

4.  Extracellular complexes of the hematopoietic human and mouse CSF-1 receptor are driven by common assembly principles.

Authors:  Jonathan Elegheert; Ambroise Desfosses; Alexander V Shkumatov; Xiongwu Wu; Nathalie Bracke; Kenneth Verstraete; Kathleen Van Craenenbroeck; Bernard R Brooks; Dmitri I Svergun; Bjorn Vergauwen; Irina Gutsche; Savvas N Savvides
Journal:  Structure       Date:  2011-12-07       Impact factor: 5.006

5.  Identification of oncogenic point mutations and hyperphosphorylation of anaplastic lymphoma kinase in lung cancer.

Authors:  Yi-Wei Wang; Pang-Hsien Tu; Kuen-Tyng Lin; Shu-Chen Lin; Jenq-Yuh Ko; Yuh-Shan Jou
Journal:  Neoplasia       Date:  2011-08       Impact factor: 5.715

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  Gain-of-function polymorphism in mouse and human Ltk: implications for the pathogenesis of systemic lupus erythematosus.

Authors:  Na Li; Kazuhiro Nakamura; Yi Jiang; Hiromichi Tsurui; Shuji Matsuoka; Masaaki Abe; Mareki Ohtsuji; Hiroyuki Nishimura; Kiyoshi Kato; Takako Kawai; Tatsuya Atsumi; Takao Koike; Toshikazu Shirai; Hiroo Ueno; Sachiko Hirose
Journal:  Hum Mol Genet       Date:  2004-01-15       Impact factor: 6.150

8.  The MORPHEUS II protein crystallization screen.

Authors:  Fabrice Gorrec
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-06-27       Impact factor: 1.056

9.  Structure of the acetophenone carboxylase core complex: prototype of a new class of ATP-dependent carboxylases/hydrolases.

Authors:  Sina Weidenweber; Karola Schühle; Ulrike Demmer; Eberhard Warkentin; Ulrich Ermler; Johann Heider
Journal:  Sci Rep       Date:  2017-01-05       Impact factor: 4.379

10.  Comparative Genomics within and across Bilaterians Illuminates the Evolutionary History of ALK and LTK Proto-Oncogene Origination and Diversification.

Authors:  Alex Dornburg; Zheng Wang; Junrui Wang; Elizabeth S Mo; Francesc López-Giráldez; Jeffrey P Townsend
Journal:  Genome Biol Evol       Date:  2021-01-07       Impact factor: 3.416

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  2 in total

Review 1.  Chromosome Imbalances in Neuroblastoma-Recent Molecular Insight into Chromosome 1p-deletion, 2p-gain, and 11q-deletion Identifies New Friends and Foes for the Future.

Authors:  Jikui Guan; Bengt Hallberg; Ruth H Palmer
Journal:  Cancers (Basel)       Date:  2021-11-24       Impact factor: 6.639

2.  The FUSION protein crystallization screen.

Authors:  Fabrice Gorrec; Dom Bellini
Journal:  J Appl Crystallogr       Date:  2022-03-11       Impact factor: 3.304

  2 in total

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