Literature DB >> 34643239

Indirect Genetic Effects: A Cross-disciplinary Perspective on Empirical Studies.

Amelie Baud1,2, Sarah McPeek3, Nancy Chen4, Kimberly A Hughes5.   

Abstract

Indirect genetic effects (IGE) occur when an individual's phenotype is influenced by genetic variation in conspecifics. Opportunities for IGE are ubiquitous, and, when present, IGE have profound implications for behavioral, evolutionary, agricultural, and biomedical genetics. Despite their importance, the empirical study of IGE lags behind the development of theory. In large part, this lag can be attributed to the fact that measuring IGE, and deconvoluting them from the direct genetic effects of an individual's own genotype, is subject to many potential pitfalls. In this Perspective, we describe current challenges that empiricists across all disciplines will encounter in measuring and understanding IGE. Using ideas and examples spanning evolutionary, agricultural, and biomedical genetics, we also describe potential solutions to these challenges, focusing on opportunities provided by recent advances in genomic, monitoring, and phenotyping technologies. We hope that this cross-disciplinary assessment will advance the goal of understanding the pervasive effects of conspecific interactions in biology. © The American Genetic Association. 2021. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  dynastic effect; genetic nurture; indirect genetic effect; interacting phenotypes; neighbor effect; social genetic effect

Mesh:

Year:  2022        PMID: 34643239      PMCID: PMC8851665          DOI: 10.1093/jhered/esab059

Source DB:  PubMed          Journal:  J Hered        ISSN: 0022-1503            Impact factor:   2.679


  121 in total

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Authors:  Simon Verhulst; Jan-Ake Nilsson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-01-27       Impact factor: 6.237

Review 2.  Plant Phenomics, From Sensors to Knowledge.

Authors:  François Tardieu; Llorenç Cabrera-Bosquet; Tony Pridmore; Malcolm Bennett
Journal:  Curr Biol       Date:  2017-08-07       Impact factor: 10.834

3.  Understanding the Social Dynamics of Breeding Phenology: Indirect Genetic Effects and Assortative Mating in a Long-Distance Migrant.

Authors:  Maria Moiron; Yimen G Araya-Ajoy; Céline Teplitsky; Sandra Bouwhuis; Anne Charmantier
Journal:  Am Nat       Date:  2020-09-25       Impact factor: 3.926

4.  Reduced signal for polygenic adaptation of height in UK Biobank.

Authors:  Jeremy J Berg; Arbel Harpak; Nasa Sinnott-Armstrong; Anja Moltke Joergensen; Hakhamanesh Mostafavi; Yair Field; Evan August Boyle; Xinjun Zhang; Fernando Racimo; Jonathan K Pritchard; Graham Coop
Journal:  Elife       Date:  2019-03-21       Impact factor: 8.140

5.  A conceptual framework for associational effects: when do neighbors matter and how would we know?

Authors:  Nora Underwood; Brian D Inouye; Peter A Hambäck
Journal:  Q Rev Biol       Date:  2014-03       Impact factor: 4.875

6.  Assortative mating for cigarette smoking and for alcohol consumption in female Australian twins and their spouses.

Authors:  Arpana Agrawal; Andrew C Heath; Julia D Grant; Michele L Pergadia; Dixie J Statham; Kathleen K Bucholz; Nicholas G Martin; Pamela A F Madden
Journal:  Behav Genet       Date:  2006-05-19       Impact factor: 2.805

7.  Comparing single- and mixed-species groups in fruit flies: differences in group dynamics, but not group formation.

Authors:  Anna R Girardeau; Brad R Foley; Julia B Saltz
Journal:  J Hered       Date:  2022-02-17       Impact factor: 2.645

Review 8.  The prospects of selection for social genetic effects to improve welfare and productivity in livestock.

Authors:  Esther D Ellen; T Bas Rodenburg; Gerard A A Albers; J Elizabeth Bolhuis; Irene Camerlink; Naomi Duijvesteijn; Egbert F Knol; William M Muir; Katrijn Peeters; Inonge Reimert; Ewa Sell-Kubiak; Johan A M van Arendonk; Jeroen Visscher; Piter Bijma
Journal:  Front Genet       Date:  2014-11-11       Impact factor: 4.599

Review 9.  Prospects for the Analysis and Reduction of Damaging Behaviour in Group-Housed Livestock, With Application to Pig Breeding.

Authors:  Laurianne Canario; Piter Bijma; Ingrid David; Irene Camerlink; Alexandre Martin; Wendy Mercedes Rauw; Loïc Flatres-Grall; Lisette van der Zande; Simon P Turner; Catherine Larzul; Lotta Rydhmer
Journal:  Front Genet       Date:  2020-12-23       Impact factor: 4.599

Review 10.  Advanced phenotyping and phenotype data analysis for the study of plant growth and development.

Authors:  Md Matiur Rahaman; Dijun Chen; Zeeshan Gillani; Christian Klukas; Ming Chen
Journal:  Front Plant Sci       Date:  2015-08-10       Impact factor: 5.753

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  2 in total

1.  Cascading indirect genetic effects in a clonal vertebrate.

Authors:  Amber M Makowicz; David Bierbach; Christian Richardson; Kimberly A Hughes
Journal:  Proc Biol Sci       Date:  2022-07-13       Impact factor: 5.530

2.  Cocaine-Induced Locomotor Activation Differs Across Inbred Mouse Substrains.

Authors:  Christiann H Gaines; Sarah A Schoenrock; Joseph Farrington; David F Lee; Lucas J Aponte-Collazo; Ginger D Shaw; Darla R Miller; Martin T Ferris; Fernando Pardo-Manuel de Villena; Lisa M Tarantino
Journal:  Front Psychiatry       Date:  2022-05-06       Impact factor: 5.435

  2 in total

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