| Literature DB >> 34631918 |
Zheng Huang1, Zixiang He2, Zhongqiu Wei3, Wei Wang4, Zhenpeng Li4, Xin Xia2, Di Qin2, Ling Zhang1, Jiayin Guo1, Jie Li4, Baowei Diao4, Zhifei Zhan2, Jingyun Zhang4, Mei Zeng3, Biao Kan4,5.
Abstract
BACKGROUND: The application of nucleic acid detection methods improves the ability of laboratories to detect diarrheal pathogens, but it also poses new challenges for the interpretation of results. It is often difficult to attribute a diarrhea episode to the detected pathogens. Here we investigated the prevalence of 19 enteropathogens among diarrheal and nondiarrheal children and provided support for understanding the clinical significance of the pathogens.Entities:
Keywords: case–control; children; diarrhea; enteropathogen
Year: 2021 PMID: 34631918 PMCID: PMC8496764 DOI: 10.1093/ofid/ofab445
Source DB: PubMed Journal: Open Forum Infect Dis ISSN: 2328-8957 Impact factor: 3.835
Basic Characteristics of Children With and Without Diarrhea
| Cases (n = 383), No. (%) | Controls (n = 327), No. (%) | χ 2 Value |
| |
|---|---|---|---|---|
| Age, mo | ||||
| 0–12 | 127 (33.2) | 65 (19.9) | 32.308 | <.0001 |
| 13–36 | 229 (59.8) | 199 (60.9) | ||
| 37–60 | 27 (7.0) | 63 (19.3) | ||
| Gender | ||||
| Male | 229 (59.8) | 199 (60.9) | 0.084 | .773 |
| Female | 154 (40.2) | 128 (39.1) | ||
| Site | ||||
| Hunan | 196 (51.2) | 197 (60.2) | 5.871 | .015 |
| Shanghai | 187 (48.8) | 130 (39.8) | ||
| Seasons | ||||
| Summer (May 2017–Jul 2017) | 62 (16.2) | 51 (15.6) | 7.969 | .047 |
| Autumn (Aug 2017–Oct 2017) | 124 (32.4) | 91 (27.8) | ||
| Winter (Nov 2017–Jan 2018) | 149 (38.9) | 119 (36.4) | ||
| Spring (Feb 2018–Apr 2018) | 48 (12.5) | 66 (20.2) | ||
| Disease severity by the Vesikari 20-point scale | ||||
| Mild (scores ≤10) | 379 (99.0) | |||
| Moderate (scores of 11–15) | 4 (1.0) | |||
| Severe (scores ≥16) | 0 |
The Prevalence of Pathogens in the Case and Control Groups and the Correlation Between Pathogens and Diarrhea
| Pathogens | Cases (n = 383), No. (%) | Controls (n = 327), No. (%) |
| Multivariate Analysis | |
|---|---|---|---|---|---|
| aOR (95% CI) |
| ||||
| Viruses | |||||
| Adenovirus | 21 (5.5) | 13 (4.0) | .382 | 1.32 (0.63–2.77) | .456 |
| Norovirus GI and GII | 63 (16.4) | 16 (4.9) | <.001 | 3.82 (2.12–6.89) | .000 |
| Rotavirus A | 84 (21.9) | 11 (3.4) | <.001 | 9.91 (4.99–19.67) | .000 |
| Bacteria | |||||
|
| 5 (1.3) | 2 (0.6) | .461 | 1.92 (0.36–10.13) | .442 |
|
| 16 (4.2) | 1 (0.3) | <.001 | 20.12 (2.57–157.38) | .004 |
|
| 30 (7.8) | 28 (8.6) | .784 | 0.81 (0.47–1.42) | .462 |
| Diarrheagenic | 75 (19.6) | 65 (19.9) | .925 | 0.99 (0.65–1.50) | .955 |
| EAEC | 40 (10.4) | 28 (8.6) | .444 | 1.16 (0.67–2.00) | .591 |
| EPEC | 35 (9.1) | 38 (11.6) | .322 | 0.77 (0.45–1.31) | .332 |
| ETEC | 6 (1.6) | 13 (4.0) | .061 | 0.40 (0.14–1.12) | .082 |
| EIEC/ | 6 (1.6) | 0 (0.0) | .034 | NA | .976 |
| STEC | 4 (1.0) | 0 (0.0) | .129 | NA | .981 |
|
| 53 (13.8) | 28 (8.6) | .033 | 1.53 (0.93–2.53) | .094 |
|
| 1 (0.3) | 1 (0.3) | >.999 | 0.97 (0.06–16.53) | .982 |
|
| 1 (0.3) | 0 (0.0) | >.999 | NA | .986 |
|
| 1 (0.3) | 0 (0.0) | >.999 | NA | .986 |
| Parasites | |||||
|
| 1 (0.3) | 0 (0.0) | >.999 | NA | .987 |
|
| 1 (0.3) | 5 (1.5) | .100 | 0.22 (0.02–1.94) | .172 |
Abbreviations: aOR, adjusted odds ratio; EAEC, enteroaggregative E. coli; EIEC, enteroinvasive E. coli; EPEC, enteropathogenic E. coli; ETEC, enterotoxigenic E. coli; NA, not applicable; OR, odds ratio; STEC, Shiga toxin–producing E. coli.
aPooled analysis controlling for age, gender, enrollment site, and month of recruitment.
b P value was calculated by Fisher exact test.
Figure 1.Ct values of pathogens in positive samples. Solid black circle (● ), positive detections in case group; solid gray circle (● ), positive detections in the control group; short bar and line (┼), median with interquartile range. aSignificant difference in Ct values between the 2 groups analyzed by Mann-Whitney test. bNo significant difference in Ct values between the 2 groups. The difference in Ct values was not analyzed when the number of positives in either of the groups was <2. The Ct value of Salmonella was not analyzed as the enrichment culture was used as the template. Abbreviations: Ct, cycle threshold; EAEC, enteroaggregative E. coli; EIEC, enteroinvasive E. coli; EPEC, enteropathogenic E. coli; ETEC, enterotoxigenic E. coli; STEC, Shiga toxin–producing E. coli.
Figure 2.Variation in pathogen prevalence and adjusted odds ratio with Ct level of pathogens. X-axis: 1–4 correspond to 4 Ct value levels, ie, 0 < Ct ≤ 20, 20 < Ct ≤ 25, 25 < Ct ≤ 30, and 30 < Ct ≤ 35. Left y-axis, the prevalence of pathogens in cases and controls. Right y-axis, adjusted odds ratio by multivariate logistic regression analysis controlling for age, gender, enrollment site, month of recruitment, and Ct level. aThe pathogen was significantly associated with diarrhea at the Ct-labeled level (P < .05). Abbreviations: aOR, adjusted odds ratio; Ct, cycle threshold; EAEC, enteroaggregative E. coli; EIEC, enteroinvasive E. coli; EPEC, enteropathogenic E. coli; ETEC, enterotoxigenic E. coli; STEC, Shiga toxin–producing E. coli.