| Literature DB >> 34628049 |
Sara Mravinacova1, Malin Jönsson2, Wanda Christ3, Jonas Klingström3, Jamil Yousef1, Cecilia Hellström1, My Hedhammar2, Sebastian Havervall4, Charlotte Thålin4, Elisa Pin1, Hanna Tegel2, Peter Nilsson1, Anna Månberg1, Sophia Hober5.
Abstract
Highly accurate serological tests are key to assessing the prevalence of SARS-CoV-2 antibodies and the level of immunity in the population. This is important to predict the current and future status of the pandemic. With the recent emergence of new and more infectious SARS-CoV-2 variants, assays allowing for high throughput analysis of antibodies able to neutralize SARS-CoV-2 become even more important. Here, we report the development and validation of a robust, high throughput method, which enables the assessment of antibodies inhibiting the binding between the SARS-CoV-2 spike protein and angiotensin converting enzyme 2 (ACE2). The assay uses recombinantly produced spike-f and ACE2 and is performed in a bead array format, which allows analysis of up to 384 samples in parallel per instrument over seven hours, demanding only one hour of manual handling. The method is compared to a microneutralization assay utilising live SARS-CoV-2 and is shown to deliver highly correlating data. Further, a comparison with a serological method that measures all antibodies recognizing the spike protein shows that this type of assessment provides important insights into the neutralizing efficiency of the antibodies, especially for individuals with low antibody levels. This method can be an important and valuable tool for large-scale assessment of antibody-based neutralization, including neutralization of new spike variants that might emerge.Entities:
Keywords: Antibodies; Bead-based; Cell-free; Neutralization; Pseudoneutralization; SARS-CoV-2
Mesh:
Substances:
Year: 2021 PMID: 34628049 PMCID: PMC8495044 DOI: 10.1016/j.nbt.2021.10.002
Source DB: PubMed Journal: N Biotechnol ISSN: 1871-6784 Impact factor: 5.079
Fig. 1Schematic of the assay procedure. Serum with antibodies (orange) is preincubated with biotinylated spike-f (green) (I) followed by incubation with ACE2-coupled magnetic beads (blue) (II). Non inhibited spike-f binds to the beads (III). Fluorescently labelled streptavidin is added (yellow) to enable read out of bead-bound spike-f (IV).
Fig. 2SPR-sensorgrams displaying the binding of A) ACE2 to spike-f revealing an affinity of 1.3 nM, spike-f is immobilized on the surface and ACE2 is injected across the surface (solid: 250 nM, dashed: 125 nM, dotted: 62.5 nM). The binding of antibodies purified from sera to spike-f, B) antibodies from a COVID19 convalescent serum and C) from a COVID19 negative serum (solid: 4 μM Ab, dashed: 2 μM Ab, dotted: 1 μM Ab). Note the different scales on the Y-axis.
Fig. 3Validation and performance of the PNT assay. The figure shows the neutralization ability of samples measured with the PNT assay at a 1:10 sample dilution. High PNT (AU) levels correspond to low neutralization capacity. COVID19 (–): pre-pandemic samples from early 2019 (n = 163) and samples from HCWs (n = 6) that are classified as seronegative in the microneutralization assay. HCW and Hospitalized: samples from HCW (n = 76) and hospitalized individuals (n = 56) classified as seropositive in the microneutralization assay (a sample is defined as positive if the antibody titre in the assay is 10 or above). Colours indicate SARS-CoV-2 serology measurements at 1:50 dilution; grey: all negative; orange: IgG-positive against the nucleocapsid NC-C; blue: IgG-positive against spike-f; red: IgG-positive against both spike-f and NC-C. The dashed line represents a cut-off between the samples classified as positive or negative in the PNT assay and is defined as 3x the SD of the mean of the COVID19 (–) samples.
Fig. 4Comparison of PNT assay with microneutralization assay. Three different sample dilutions in the PNT assay are shown, A) 1:10, B) 1:50 and C) 1:500. PNT is found on the y-axis and the reciprocal titres from the microneutralization assay on the x-axis. Serum samples with a neutralization titre <10 are regarded as negative. The dashed line in A) represents a cut-off between the samples classified as positive or negative in the PNT assay and is defined as 3x the SD of the mean of the pre-pandemic samples (n = 163) and the samples classified as negative in the microneutralization assay (n = 6).
Fig. 5Comparison of PNT assay with serological analysis of spike-f specific antibodies. To discriminate between samples with diverse high signals, various sample dilutions were performed in A) 1:10 PNT and 1:50 serology; B) 1:50 PNT and 1:50 serology and C) 1:50 PNT and 1:500 serology. Negative serum samples collected during 2019 were included in the assay to assess the possible background in the PNT assay. Colours indicate status in the microneutralization assay; grey: negative; orange: positive. The dashed line in A) represents a cut-off between the samples classified as positive or negative in the PNT assay and is defined as 3x the SD of the mean of the pre-pandemic samples (n = 163) and the samples classified as negative in the microneutralization assay (n = 6). The dotted line in A) represents a cut-off for seropositivity for spike-f and was calculated as the mean + 6 × SD of 12 negative reference samples included in the analysis.
Fig. 6Correlation plots between PNT measurements using different sample preparations. A) heat-treated serum vs. plasma, B) non-heat-treated serum vs. plasma, C) heat-treated vs. non-heat-treated serum D) heat-treated vs. non-heat-treated plasma.