Literature DB >> 34617657

Conserved germ plasm characteristics across the Danio and Devario lineages.

Christina L Hansen1, Trevor J Chamberlain1, Ryan L Trevena1, Jacob E Kurek1, Francisco Pelegri1.   

Abstract

In many animal species, germ cell specification requires the inheritance of germ plasm, a biomolecular condensate containing maternally derived RNAs and proteins. Most studies of germ plasm composition and function have been performed in widely evolutionarily divergent model organisms, such as Caenorhabditis elegans, Drosophila, Xenopus laevis, and Danio rerio (zebrafish). In zebrafish, 12 RNAs localize to germ plasm at the furrows of the early embryo. Here, we tested for the presence of these RNAs in three additional species within the Danionin clade: Danio kyathit, Danio albolineatus, and Devario aequipinnatus. By visualizing nanos RNA, we find that germ plasm segregation patterns during early embryogenesis are conserved across these species. Ten additional germ plasm RNAs exhibit localization at the furrows of early embryos in all three non-zebrafish Danionin species, consistent with germ plasm localization. One component of zebrafish germ plasm, ca15b, lacked specific localization in embryos of the more distantly related D. aequipinnatus. Our findings show that within a subset of closely related Danionin species, the vast majority of germ plasm RNA components are conserved. At the same time, the lack of ca15b localization in D. aequipinnatus germ plasm highlights the potential for the divergence of germ plasm composition across a restricted phylogenetic space.
© 2021 Wiley Periodicals LLC.

Entities:  

Keywords:  Danionin; embryonic development; evolution; germline; primordial germ cells; zebrafish

Mesh:

Substances:

Year:  2021        PMID: 34617657      PMCID: PMC8651028          DOI: 10.1002/dvg.23452

Source DB:  PubMed          Journal:  Genesis        ISSN: 1526-954X            Impact factor:   2.389


  87 in total

1.  Maternal mRNA localization of zebrafish DAZ-like gene.

Authors:  S Maegawa; K Yasuda; K Inoue
Journal:  Mech Dev       Date:  1999-03       Impact factor: 1.882

Review 2.  Mechanisms of germ cell specification across the metazoans: epigenesis and preformation.

Authors:  Cassandra G Extavour; Michael Akam
Journal:  Development       Date:  2003-12       Impact factor: 6.868

3.  High-throughput analysis reveals novel maternal germline RNAs crucial for primordial germ cell preservation and proper migration.

Authors:  Dawn A Owens; Amanda M Butler; Tristan H Aguero; Karen M Newman; Derek Van Booven; Mary Lou King
Journal:  Development       Date:  2017-01-15       Impact factor: 6.868

4.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

5.  Slow calcium waves mediate furrow microtubule reorganization and germ plasm compaction in the early zebrafish embryo.

Authors:  Celeste Eno; Timothy Gomez; Diane C Slusarski; Francisco Pelegri
Journal:  Development       Date:  2018-05-17       Impact factor: 6.868

6.  A critical role for Xdazl, a germ plasm-localized RNA, in the differentiation of primordial germ cells in Xenopus.

Authors:  D W Houston; M L King
Journal:  Development       Date:  2000-02       Impact factor: 6.868

7.  nos-1 and nos-2, two genes related to Drosophila nanos, regulate primordial germ cell development and survival in Caenorhabditis elegans.

Authors:  K Subramaniam; G Seydoux
Journal:  Development       Date:  1999-11       Impact factor: 6.868

8.  The sequence read archive.

Authors:  Rasko Leinonen; Hideaki Sugawara; Martin Shumway
Journal:  Nucleic Acids Res       Date:  2010-11-09       Impact factor: 16.971

9.  Zebrafish vasa RNA but not its protein is a component of the germ plasm and segregates asymmetrically before germline specification.

Authors:  H Knaut; F Pelegri; K Bohmann; H Schwarz; C Nüsslein-Volhard
Journal:  J Cell Biol       Date:  2000-05-15       Impact factor: 10.539

10.  HybPiper: Extracting coding sequence and introns for phylogenetics from high-throughput sequencing reads using target enrichment.

Authors:  Matthew G Johnson; Elliot M Gardner; Yang Liu; Rafael Medina; Bernard Goffinet; A Jonathan Shaw; Nyree J C Zerega; Norman J Wickett
Journal:  Appl Plant Sci       Date:  2016-07-12       Impact factor: 1.936

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