| Literature DB >> 34616844 |
Hanjiang Xu1,2,3, Fan Mo1,2,3, Jun Zhou1,2,3, Zongyao Hao1,2,3, Xianguo Chen1,2,3, Chaozhao Liang1,2,3.
Abstract
METHOD: We search the PubMed, Embase, Google Scholar, and Wanfang (China) databases (up to December 1, 2020) to identify all eligible publications. The pooled odds ratio (OR) correspondence with 95% confidence interval (CI) was calculated to evaluate the associations.Entities:
Mesh:
Substances:
Year: 2021 PMID: 34616844 PMCID: PMC8490044 DOI: 10.1155/2021/6525449
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Methodological quality of the included studies according to the Newcastle-Ottawa Scale.
| Variants | Author | Representativeness of cases | Source of controls | HWE in controls | Genotyping examination | Association assessment | Total scores |
|---|---|---|---|---|---|---|---|
| rs7579 | Meplan et al. | ∗∗ | ∗∗ | ∗∗ | 0 | ∗∗ | 8 |
| Steinbrecher et al. | ∗∗ | ∗∗ | ∗∗ | 0 | ∗∗ | 8 | |
| Meplan et al. | ∗∗ | ∗ | ∗ | 0 | ∗ | 5 | |
| Sutherland et al. | ∗∗ | ∗ | ∗ | 0 | ∗∗ | 6 | |
| Amini et al. | ∗∗ | ∗∗ | ∗ | 0 | ∗∗ | 7 | |
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| rs3877899 | Steinbrecher et al. | ∗∗ | ∗∗ | ∗∗ | 0 | ∗∗ | 8 |
| Cooper et al. | ∗∗ | ∗∗ | ∗∗ | 0 | ∗∗ | 8 | |
| Geybels et al. | ∗∗ | ∗∗ | ∗∗ | 0 | ∗∗ | 8 | |
| Karunasinghe et al. | ∗∗ | ∗∗ | ∗∗ | 0 | ∗∗ | 8 | |
| Meplan et al. | ∗∗ | ∗ | ∗ | 0 | ∗ | 5 | |
| Sutherland et al. | ∗∗ | ∗ | ∗∗ | 0 | ∗∗ | 7 | |
| Meplan et al. | ∗∗ | ∗∗ | ∗∗ | 0 | ∗∗ | 8 | |
| Jablonska et al. | ∗∗ | ∗∗ | ∗∗ | 0 | ∗∗ | 8 | |
| Mohammaddoust et al. | ∗∗ | ∗∗ | ∗ | 0 | ∗∗ | 7 | |
This table identifies “high” quality choices with a “star.” A study can be awarded a maximum of one star for each numbered item within the selection and exposure categories. A maximum of 2 stars can be given for comparability.
Figure 1The eligible study selection process.
Characteristics of case-control studies on SEPP1 polymorphisms and cancer risk included in the meta-analysis.
| Variants | Author | Year | Tumor type | Ethnicity | Genotyping method | Source of controls | Case | Control | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GG | GA | AA | GG | GA | AA | ||||||||
| rs7579 | Méplan et al. | 2013 | BC | European | TaqMan | PB | 455 | 396 | 86 | 436 | 420 | 101 | 0.992 |
| Steinbrecher et al. | 2010 | PCa | European | MALDI-TOF | PB | 116 | 105 | 27 | 250 | 209 | 33 | 0.224 | |
| Méplan et al. | 2010 | CRC | European | KASPar | HB | 260 | 369 | 61 | 269 | 323 | 37 |
| |
| Sutherland et al. | 2010 | CRC | Asian | PCR-RFLP | HB | 190 | 121 | 32 | 363 | 239 | 67 |
| |
| Amini et al. | 2019 | CRC | Asian | PCR-HRM | PB | 24 | 22 | 14 | 40 | 23 | 11 |
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| rs3877899 | Steinbrecher et al. | 2010 | PCa | European | MALDI-TOF | PB | 152 | 86 | 10 | 271 | 194 | 27 | 0.309 |
| Cooper et al. | 2008 | PCa | European | TaqMan | PB | 1522 | 949 | 172 | 878 | 595 | 97 | 0.775 | |
| Geybels et al. | 2013 | PCa | European | MALDI-TOF | PB | 758 | 441 | 53 | 739 | 426 | 67 | 0.585 | |
| Karunasinghe et al. | 2012 | PCa | European | TaqMan | PB | 153 | 88 | 18 | 255 | 162 | 19 | 0.286 | |
| Méplan et al. | 2010 | CRC | European | KASPar | HB | 427 | 258 | 47 | 409 | 204 | 44 |
| |
| Sutherland et al. | 2010 | CRC | Asian | PCR-RFLP | HB | 797 | 5 | 0 | 710 | 1 | 0 | 0.985 | |
| Méplan et al. | 2013 | BC | European | TaqMan | PB | 586 | 321 | 30 | 594 | 317 | 48 | 0.499 | |
| Jablonska et al. | 2015 | BC | European | TaqMan | PB | 81 | 44 | 9 | 122 | 55 | 6 | 0.948 | |
| Mohammaddoust et al. | 2017 | BC | Asian | PCR-RFLP | PB | 80 | 37 | 33 | 151 | 33 | 16 |
| |
BC: breast cancer; PCa: prostate cancer; CRC: colorectal cancer; PB: population-based; HB: hospital-based; MALDI-TOF: matrix-assisted laser desorption/ionizing time-of-flight mass spectrometry; PCR-RFLP: polymerase chain reaction-restriction fragment length polymorphism; PCR-HRM: polymerase chain reaction high-resolution melting method; KASPar: KBiosciences' Competitive Allele-Specific PCR; TaqMan: TaqMan fluorescent probe method.
Subgroup analyses of the SEPP1 polymorphisms and cancer risk.
| Variants | Comparison | Subgroup |
| Regression model | ||||
|---|---|---|---|---|---|---|---|---|
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| Random | Fixed | ||||
| rs3877899 | A vs. G | Overall | 9 | ≤0.001 | 0.243 | 0.104 | 1.099 (0.938-1.287) | 1.008 (0.948-1.071) |
| A vs. G | PCa | 4 | 0.514 | 0.206 | 0.954 (0.885-1.027) | 0.953 (0.885-1.027) | ||
| A vs. G | BC | 3 | ≤0.001 | 0.240 | 1.480 (0.770-2.844) | 1.134 (0.992-1.295) | ||
| A vs. G | PB | 7 | ≤0.001 | 0.335 | 1.093 (0.912-1.310) | 0.993 (0.931-1.059) | ||
| A vs. G | Y | 7 | 0.293 | 0.231 | 0.962 (0.888-1.042) | 0.961 (0.899-1.026) | ||
| A vs. G | European | 7 | 0.269 | 0.434 | 0.979 (0.910-1.055) | 0.976 (0.917-1.038) | ||
| AA vs. GG | Overall | 8 | ≤0.001 | 0.498 | 0.337 | 1.129 (0.794-1.605) | 1.021 (0.871-1.196) | |
| AA vs. GG | PCa | 4 | 0.206 | 0.604 | 0.946 (0.718-1.246) | 0.949 (0.780-1.155) | ||
| AA vs. GG | BC | 3 | ≤0.001 | 0.405 | 1.726 (0.478-6.237) | 1.269 (0.902-1.784) | ||
| AA vs. GG | PB | 7 | ≤0.001 | 0.483 | 1.162 (0.765-1.765) | 1.020 (0.861-1.210) | ||
| AA vs. GG | Y | 6 | 0.081 | 0.599 | 0.925 (0.693-1.236) | 0.917 (0.767-1.095) | ||
| AA vs. GG | European | 7 | 0.124 | 0.397 | 0.936 (0.738-1.187) | 0.931 (0.790-1.098) | ||
| AG vs. GG | Overall | 9 | 0.036 | 0.603 | 0.109 | 1.035 (0.909-1.179) | 1.003 (0.928-1.084) | |
| AG vs. GG | PCa | 4 | 0.585 | 0.156 | 0.934 (0.850-1.027) | 0.934 (0.850-1.026) | ||
| AG vs. GG | BC | 3 | 0.046 | 0.203 | 1.300 (0.868-1.947) | 1.123 (0.948-1.331) | ||
| AG vs. GG | PB | 7 | 0.072 | 0.975 | 0.998 (0.875-1.138) | 0.976 (0.898-1.060) | ||
| AG vs. GG | Y | 7 | 0.478 | 0.351 | 0.960 (0.883-1.044) | 0.961 (0.884-1.045) | ||
| AG vs. GG | European | 7 | 0.308 | 0.703 | 0.989 (0.904-1.082) | 0.985 (0.911-1.065) | ||
| AG+AA vs. GG | Overall | 9 | 0.001 | 0.356 | 0.098 | 1.079 (0.919-1.267) | 1.008 (0.936-1.085) | |
| AG+AA vs. GG | PCa | 4 | 0.623 | 0.152 | 0.936 (0.855-1.025) | 0.936 (0.855-1.025) | ||
| AG+AA vs. GG | BC | 3 | ≤0.001 | 0.210 | 1.474 (0.804-2.704) | 1.150 (0.980-1.350) | ||
| AG+AA vs. GG | PB | 7 | 0.001 | 0.551 | 1.056 (0.884-1.261) | 0.984 (0.909-1.064) | ||
| AG+AA vs. GG | Y | 7 | 0.452 | 0.266 | 0.955 (0.881-1.034) | 0.956 (0.882-1.035) | ||
| AG+AA vs. GG | European | 7 | 0.317 | 0.553 | 0.981 (0.901-1.068) | 0.978 (0.907-1.054) | ||
| AA vs. AG+GG | Overall | 8 | 0.001 | 0.555 | 0.371 | 1.103 (0.797-1.526) | 1.017 (0.871-1.189) | |
| AA vs. AG+GG | PCa | 4 | 0.176 | 0.811 | 0.974 (0.733-1.295) | 0.977 (0.806-1.184) | ||
| AA vs. AG+GG | BC | 3 | ≤0.001 | 0.445 | 1.580 (0.489-5.108) | 1.199 (0.856-1.681) | ||
| AA vs. AG+GG | PB | 7 | 0.001 | 0.497 | 1.143 (0.777-1.681) | 1.027 (0.869-1.215) | ||
| AA vs. AG+GG | Y | 6 | 0.067 | 0.699 | 0.944 (0.704-1.265) | 0.936 (0.786-1.115) | ||
| AA vs. AG+GG | European | 7 | 0.113 | 0.444 | 0.940 (0.741-1.192) | 0.939 (0.799-1.103) | ||
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| rs7579 | A vs. G | Overall | 5 | 0.015 | 0.309 | 0.233 | 1.090 (0.923-1.286) | 1.044 (0.958-1.137) |
| A vs. G | CRC | 3 | 0.079 | 0.236 | 1.148 (0.914-1.443) | 1.125 (0.995-1.273) | ||
| A vs. G | European | 3 | 0.013 | 0.449 | 1.084 (0.880-1.335) | 1.047 (0.952-1.152) | ||
| A vs. G | PB | 3 | 0.015 | 0.405 | 1.137 (0.840-1.539) | 1.01 (0.892-1.123) | ||
| A vs. G | N | 3 | 0.079 | 0.236 | 1.148 (0.914-1.443) | 1.125 (0.995-1.273) | ||
| AA vs. GG | Overall | 5 | 0.014 | 0.230 | 0.157 | 1.267 (0.861-1.866) | 1.128 (0.923-1.379) | |
| AA vs. GG | CRC | 3 | 0.091 | 0.204 | 1.387 (0.837-2.296) | 1.329 (0.989-1.786) | ||
| AA vs. GG | European | 3 | 0.007 | 0.337 | 1.310 (0.755-2.274) | 1.147 (0.910-1.445) | ||
| AA vs. GG | PB | 3 | 0.019 | 0.383 | 1.334 (0.698-2.548) | 1.043 (0.802-1.356) | ||
| AA vs. GG | N | 3 | 0.091 | 0.204 | 1.387 (0.837-2.296) | 1.329 (0.989-1.786) | ||
| AG vs. GG | Overall | 5 | 0.315 | 0.715 | 0.264 | 1.029 (0.900-1.177) | 1.022 (0.908-1.151) | |
| AG vs. GG | CRC | 3 | 0.357 | 0.223 | 1.112 (0.932-1.327) | 1.112 (0.937-1.321) | ||
| AG vs. GG | European | 3 | 0.190 | 0.753 | 1.034 (0.866-1.234) | 1.022 (0.895-1.166) | ||
| AG vs. GG | PB | 3 | 0.276 | 0.693 | 0.994 (0.808-1.224) | 0.968 (0.825-1.136) | ||
| AG vs. GG | N | 3 | 0.357 | 0.223 | 1.112 (0.932-1.327) | 1.112 (0.937-1.321) | ||
| AG+AA vs. GG | Overall | 5 | 0.071 | 0.434 | 0.210 | 1.075 (0.897-1.287) | 1.038 (0.927-1.162) | |
| AG+AA vs. GG | CRC | 3 | 0.149 | 0.116 | 1.158 (0.897-1.496) | 1.140 (0.968-1.342) | ||
| AG+AA vs. GG | European | 3 | 0.051 | 0.551 | 1.072 (0.852-1.350) | 1.039 (0.915-1.180) | ||
| AG+AA vs. GG | PB | 3 | 0.069 | 0.581 | 1.093 (0.798-1.497) | 0.983 (0.845-1.144) | ||
| AG+AA vs. GG | N | 3 | 0.149 | 0.116 | 1.158 (0.897-1.287) | 1.140 (0.968-1.342) | ||
| AA vs. AG+GG | Overall | 5 | 0.053 | 0.245 | 0.180 | 1.209 (0.878-1.666) | 1.117 (0.921-1.355) | |
| AA vs. AG+GG | CRC | 3 | 0.189 | 0.109 | 1.280 (0.861-1.903) | 1.261 (0.949-1.676) | ||
| AA vs. AG+GG | European | 3 | 0.022 | 0.316 | 1.268 (0.797-2.019) | 1.139 (0.912-1.422) | ||
| AA vs. AG+GG | PB | 3 | 0.046 | 0.396 | 1.264 (0.736-2.169) | 1.054 (0.820-1.355) | ||
| AA vs. AG+GG | N | 3 | 0.189 | 0.109 | 1.280 (0.861-1.903) | 1.261 (0.949-1.676) | ||
PCa: prostate cancer; BC: breast cancer; CRC: colorectal cancer; HWE: Hardy-Weinberg Equilibrium; Y: study conformed to HWE; N: study did not conform to HWE; P-B: population-based; H-B: hospital-based; PE = P value of Egger test; PH = P value of heterogeneity test; PZ = P value of Z test.
Figure 2(a) Begg's funnel plot of publication bias (for rs7579 polymorphism, A vs. G). Each point represents a separate study for the indicated association. Log (OR), natural logarithm of OR; horizontal line, mean effect size. CI = confidence interval; OR = odds ratio. (b) Begg's funnel plot of publication bias (for rs3877899 polymorphism, GA vs. GG). Each point represents a separate study for the indicated association. Log (OR), natural logarithm of OR; horizontal line, mean effect size. CI = confidence interval; OR = odds ratio.