| Literature DB >> 34616173 |
Alicia Romero-Lorca1, Apolonia Novillo1, María Gaibar1, María Fuencisla Gilsanz1, Miguel Galán1, Laura Beltrán1, Beatriz Antón2, Diego Malón2, Amalia Moreno2, Ana Fernández-Santander1.
Abstract
PURPOSE: Bevacizumab is a monoclonal antibody that binds to vascular endothelial growth factor A. It is currently used in combination with chemotherapy to treat metastatic colorectal cancer. This therapy is not equally effective in every patient; in some, mechanisms of resistance arise that remain poorly understood. The aim of the present work was to determine whether the expression of 26 miRNAs could be associated with the effectiveness of bevacizumab plus chemotherapy, with progression-free survival (PFS), and with overall survival (OS) in metastatic colorectal cancer. PATIENTS AND METHODS: Paraffin-embedded biopsies from 76 patients with metastatic colorectal cancer were collected to isolate miRNAs. The expression of 26 miRNAs was analyzed by quantitative RT-PCR. For the purpose of analysis, patients were classified as either "responders" (PFS ≥6 months since beginning treatment) or "non-responders" (PFS <6 months). For the analysis of PFS and OS, patients were classified into two groups using the median gene expression value as the cut-off point ("high" [≥50% percentile] or "low" [<50% percentile]). Time-to-event data were analyzed using the Kaplan-Meier method and compared by the log rank test. Cox regression was used to estimate hazard ratios (HR) and their 95% confidence intervals.Entities:
Keywords: bevacizumab; colorectal cancer; miRNAs; overall survival; paraffin-embedded biopsies; progression free survival
Year: 2021 PMID: 34616173 PMCID: PMC8488031 DOI: 10.2147/PGPM.S313594
Source DB: PubMed Journal: Pharmgenomics Pers Med ISSN: 1178-7066
Sequences and Code Numbers of the 26 miRNAs Analyzed ()
| miRNA | Sequence | Code Number |
|---|---|---|
| hsa-miR-7-5p | UGGAAGACUAGUGAUUUUGUUGUU | MIMAT0000252 |
| hsa-miR-10a-5p | UACCCUGUAGAUCCGAAUUUGUG | MIMAT0000253 |
| hsa-miR-20b-5p | CAAAGUGCUCAUAGUGCAGGUAG | MIMAT0001413 |
| hsa-miR-27b-3p | UUCACAGUGGCUAAGUUCUGC | MIMAT0000419 |
| hsa-miR-29b-3p | UAGCACCAUUUGAAAUCAGUGUU | MIMAT0000100 |
| hsa-miR-34a-5p | UGGCAGUGUCUUAGCUGGUUGU | MIMAT0000255 |
| hsa-miR-92b-3p | UAUUGCACUCGUCCCGGCCUCC | MIMAT0003218 |
| hsa-miR-101-3p | UACAGUACUGUGAUAACUGAA | MIMAT0000099 |
| hsa-miR-124-3p | UAAGGCACGCGGUGAAUGCCAA | MIMAT0000422 |
| hsa-miR-125a-5p | UCCCUGAGACCCUUUAACCUGUGA | MIMAT0000443 |
| hsa-miR-126-3p | UCGUACCGUGAGUAAUAAUGCG | MIMAT0000445 |
| hsa-miR-143-3p | TGAGATGAAGCACTGTAGCTC | MIMAT0000435 |
| hsa-miR-145-5p | GUCCAGUUUUCCCAGGAAUCCCU | MIMAT0000437 |
| hsa-miR-155-5p | UUAAUGCUAAUCGUGAUAGGGGUU | MIMAT0000646 |
| hsa-miR-192-5p | CUGACCUAUGAAUUGACAGCC | MIMAT0000222 |
| hsa-miR-196b-5p | UAGGUAGUUUCCUGUUGUUGGG | MIMAT0001080 |
| hsa-miR-199a-5p | CCCAGUGUUCAGACUACCUGUUC | MIMAT0000231 |
| hsa-miR-200b-3p | UAAUACUGCCUGGUAAUGAUGA | MIMAT0000318 |
| hsa-miR-204-5p | UUCCCUUUGUCAUCCUAUGCCU | MIMAT0000265 |
| hsa-miR-222-3p | AGCUACAUCUGGCUACUGGGU | MIMAT0000279 |
| hsa-miR-363-3p | AAUUGCACGGUAUCCAUCUGUA | MIMAT0000707 |
| hsa-miR-376a-3p | AUCAUAGAGGAAAAUCCACGU | MIMAT0000729 |
| hsa-miR-455-5p | UAUGUGCCUUUGGACUACAUCG | MIMAT0003150 |
| hsa-miR-497-5p | CAGCAGCACACUGUGGUUUGU | MIMAT0002820 |
| hsa-miR-663a | AGGCGGGGCGCCGCGGGACCGC | MIMAT0003326 |
| hsa-miR-664-3p | UAUUCAUUUAUCCCCAGCCUACA | MIMAT0005949 |
Patient Characteristics
| Patient Characteristics | No. (%) |
|---|---|
| Median age, years | 62; range 27–84 |
| Gender | |
| - Male | 53 (69.7) |
| - Female | 23 (30.3) |
| Tumor location | |
| - Right-sided | 20 (26.7) |
| - Left-sided | 55 (73.3) |
| Stage at diagnosis | |
| - II | 2 (2.6) |
| - III | 17 (22.4) |
| - IV | 57 (75.0) |
| KRAS Status | |
| - Wild type | 18 (24.3) |
| - Mutated | 56 (75.7) |
| Chemotherapy regimen | |
| - FOLFOX4 | 36 (47.4) |
| - FOLFIRI | 26 (34.2) |
| - Xeloda | 8 (10.5) |
| - 5-Fluorouracil | 4 (5.3) |
| - Irinotecan | 2 (2.6) |
| Response to bevacizumab | |
| - Responders | 41 (53.9) |
| - Non-Responders | 35 (46.1) |
Figure 1Progression-free survival (A) and overall survival (B).
Figure 2Average relative gene expression (2∆∆Ct) of the 26 miRNAs with respect to responder status: responders (light grey, n=41) and non-responders (dark grey, n=35).
Correlation Between miRNAs Expression with Respect to Responder Status (R= Responders, NR= Non-Responders). Significant Results are Shown in Bold Type
| miRNA | Response Status | N | Mean | SD | Median | Range | p value |
|---|---|---|---|---|---|---|---|
| R | 34 | 3.55 | 10.03 | 0.13 | 0.00–55.18 | ||
| NR | 31 | 27.74 | 138.85 | 1.05 | 0.00–775.36 | ||
| R | 34 | 2.57 | 8.43 | 0.12 | 0.00–48.00 | ||
| NR | 31 | 10.47 | 42.38 | 0.69 | 0.00–237.22 | ||
| miR-20b-5p | R | 27 | 0.036 | 0.070 | 0.004 | 0.00–0.33 | 0.051 |
| NR | 28 | 0.068 | 0.118 | 0.028 | 0.00–0.58 | ||
| miR-29b-3p | R | 34 | 30.38 | 84.76 | 0.64 | 0.00–3296.80 | 0.100 |
| NR | 31 | 118.19 | 590.30 | 3.50 | 0.00–390.14 | ||
| miR-204-5p | R | 34 | 1.08 | 4.55 | 0.05 | 0.00–26.63 | 0.053 |
| NR | 27 | 1.97 | 7.32 | 0.21 | 0.00–37.93 |
Progression-Free Survival with Respect to miRNA Expression. Significant Results are Shown in Bold Type
| Patients with miRNA Expression Values < Cutoff | Patients with miRNA Expression Values ≥ Cutoff | Log Rank Test Results | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| miRNA | n | Month | 95% CI | n | Month | 95% CI | HR | 95% CI | p | |||
| miR-7-5p | 30 | 11.34 | 8.07 | 16.26 | 32 | 7.44 | 6.00 | 11.74 | 1.37 | 0.82 | 2.29 | 0.232 |
| miR-10a-5p | 31 | 11.74 | 8.52 | 15.70 | 31 | 6.62 | 5.51 | 10.95 | 1.55 | 0.93 | 2.59 | 0.093 |
| miR-20b-5p | 25 | 11.34 | 5.61 | 19.57 | 27 | 10.39 | 6.20 | 15.64 | 1.35 | 0.76 | 2.41 | 0.299 |
| miR-27b-3p | 31 | 9.41 | 6.20 | 13.05 | 33 | 8.75 | 6.62 | 13.18 | 1.20 | 0.72 | 2.01 | 0.477 |
| miR-29b-3p | 31 | 11.34 | 6.89 | 15.70 | 31 | 8.26 | 6.20 | 12.20 | 1.28 | 0.77 | 2.15 | 0.344 |
| miR-34a-5p | 31 | 9.41 | 6.00 | 13.18 | 33 | 8.75 | 7.05 | 12.20 | 1.09 | 0.66 | 1.82 | 0.726 |
| miR-92b-3p | 30 | 8.75 | 5.74 | 15.70 | 31 | 9.48 | 6.62 | 13.05 | 0.94 | 0.55 | 1.59 | 0.809 |
| miR-101-3p | 30 | 7.11 | 6.00 | 12.43 | 33 | 10.95 | 7.44 | 15.64 | 0.94 | 0.56 | 1.56 | 0.803 |
| miR-124-3p | 29 | 9.41 | 5.51 | 15.64 | 31 | 8.75 | 7.05 | 13.18 | 1.20 | 0.71 | 2.04 | 0.498 |
| miR-125a-5p | 31 | 11.74 | 6.62 | 16.26 | 32 | 7.44 | 6.20 | 10.95 | 1.54 | 0.92 | 2.59 | 0.097 |
| miR-126-3p | 30 | 10.43 | 6.52 | 15.64 | 33 | 8.26 | 5.61 | 10.95 | 1.44 | 0.86 | 2.42 | 0.163 |
| 30 | 7.05 | 5.74 | 10.43 | 33 | 12.20 | 8.07 | 16.26 | 0.57 | 0.33 | 0.96 | ||
| miR-145-5p | 30 | 7.05 | 5.74 | 11.74 | 33 | 10.95 | 7.44 | 15.64 | 0.82 | 0.49 | 1.36 | 0.434 |
| miR-155-5p | 31 | 11.34 | 7.05 | 15.70 | 31 | 7.84 | 6.20 | 12.20 | 1.44 | 0.86 | 2.41 | 0.167 |
| miR-192-5p | 31 | 8.75 | 6.20 | 14.03 | 32 | 9.48 | 6.62 | 13.18 | 1.16 | 0.69 | 1.95 | 0.564 |
| miR-196b-5p | 32 | 10.39 | 5.74 | 15.48 | 31 | 8.52 | 6.62 | 13.05 | 1.26 | 0.75 | 2.10 | 0.386 |
| miR-199a-5p | 31 | 9.41 | 6.00 | 13.05 | 32 | 8.75 | 6.89 | 15.48 | 0.95 | 0.57 | 1.59 | 0.852 |
| miR-200b-3p | 32 | 10.43 | 6.52 | 15.64 | 32 | 7.44 | 5.61 | 12.20 | 1.43 | 0.86 | 2.38 | 0.164 |
| miR-204-5p | 28 | 11.34 | 8.75 | 15.70 | 30 | 7.44 | 5.74 | 15.48 | 1.18 | 0.69 | 2.00 | 0.552 |
| miR-222-3p | 32 | 10.43 | 6.89 | 15.64 | 30 | 7.84 | 5.61 | 13.18 | 1.04 | 0.62 | 1.75 | 0.879 |
| miR-363-3p | 29 | 11.34 | 5.51 | 15.64 | 31 | 8.26 | 6.62 | 13.18 | 1.00 | 0.59 | 1.70 | 0.989 |
| miR-376a-3p | 31 | 11.74 | 6.89 | 16.26 | 33 | 8.26 | 5.34 | 10.95 | 1.50 | 0.90 | 2.49 | 0.117 |
| miR-455-5p | 31 | 8.52 | 5.74 | 12.43 | 32 | 10.39 | 7.11 | 15.48 | 0.91 | 0.55 | 1.52 | 0.728 |
| miR-497-5p | 31 | 6.89 | 5.44 | 11.74 | 33 | 10.95 | 7.84 | 15.70 | 0.71 | 0.43 | 1.18 | 0.188 |
| miR-663a | 31 | 11.74 | 5.74 | 15.70 | 31 | 8.26 | 6.52 | 10.95 | 1.11 | 0.66 | 1.88 | 0.687 |
| miR-664-3p | 31 | 10.39 | 5.74 | 15.64 | 33 | 8.52 | 6.89 | 12.20 | 1.07 | 0.65 | 1.78 | 0.789 |
Figure 3Progression-free survival with respect to miR-143-3p expression. The continuous line represents patients with low miRNA expression values (
Overall Survival in Relation to miRNA Expression. Significant Results are Shown in Bold Type
| Patients with miRNA Expression Values < Cutoff | Patients with miRNA Expression Values ≥ Cutoff | Log Rank Test Results | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| miRNA | n | Month | 95% CI | n | Month | 95% CI | HR | 95% CI | p | |||
| 31 | 32.89 | 22.30 | 44.95 | 32 | 18.85 | 12.10 | 24.59 | 2.54 | 1.42 | 4.55 | ||
| 32 | 28.85 | 21.48 | 43.84 | 31 | 22.07 | 12.20 | 29.28 | 1.81 | 1.02 | 3.20 | ||
| miR-20b-5p | 26 | 29.74 | 18.62 | 43.84 | 27 | 23.51 | 19.38 | 29.28 | 1.48 | 0.80 | 2.75 | 0.212 |
| miR-27b-3p | 32 | 28.39 | 14.03 | 37.87 | 33 | 23.11 | 18.85 | 27.54 | 1.48 | 0.84 | 2.59 | 0.170 |
| miR-29b-3p | 32 | 27.54 | 20.00 | 39.28 | 31 | 22.07 | 12.82 | 29.28 | 1.50 | 0.85 | 2.64 | 0.159 |
| miR-34a-5p | 32 | 28.85 | 18.62 | 36.52 | 33 | 22.30 | 14.75 | 24.59 | 1.29 | 0.74 | 2.25 | 0.360 |
| miR-92b-3p | 31 | 23.87 | 18.62 | 34.89 | 31 | 23.51 | 18.85 | 32.72 | 0.89 | 0.50 | 1.58 | 0.701 |
| miR-101-3p | 31 | 28.39 | 12.82 | 36.52 | 33 | 23.11 | 19.38 | 29.28 | 1.15 | 0.66 | 2.01 | 0.631 |
| miR-124-3p | 30 | 28.85 | 12.82 | 43.84 | 31 | 23.51 | 19.38 | 29.28 | 1.45 | 0.81 | 2.58 | 0.206 |
| miR-125a-5p | 32 | 28.85 | 21.48 | 34.89 | 32 | 20.72 | 12.20 | 27.54 | 1.36 | 0.78 | 2.37 | 0.281 |
| miR-126-3p | 31 | 29.74 | 18.62 | 39.28 | 33 | 22.30 | 16.03 | 24.59 | 1.65 | 0.94 | 2.91 | 0.080 |
| miR-143-3p | 31 | 21.48 | 12.82 | 34.89 | 33 | 24.59 | 20.72 | 32.72 | 0.74 | 0.42 | 1.29 | 0.285 |
| miR-145-5p | 31 | 23.87 | 12.82 | 35.02 | 33 | 23.51 | 20.00 | 29.74 | 0.90 | 0.51 | 1.57 | 0.701 |
| miR-155-5p | 32 | 23.87 | 14.03 | 39.28 | 31 | 23.51 | 18.85 | 29.28 | 1.22 | 0.69 | 2.13 | 0.495 |
| miR-192-5p | 32 | 22.30 | 12.82 | 37.87 | 32 | 23.51 | 20.00 | 30.92 | 1.16 | 0.66 | 2.04 | 0.595 |
| miR-196b-5p | 33 | 28.39 | 19.38 | 37.87 | 31 | 23.11 | 14.75 | 29.28 | 1.39 | 0.79 | 2.42 | 0.248 |
| miR-199a-5p | 31 | 23.51 | 12.82 | 29.74 | 33 | 23.51 | 19.38 | 32.72 | 0.85 | 0.49 | 1.49 | 0.570 |
| miR-200b-3p | 33 | 28.39 | 19.38 | 39.28 | 32 | 22.30 | 14.75 | 27.54 | 1.59 | 0.91 | 2.77 | 0.100 |
| miR-204-5p | 29 | 28.39 | 22.20 | 37.87 | 30 | 21.48 | 14.75 | 29.28 | 1.41 | 0.79 | 2.53 | 0.244 |
| miR-222-3p | 33 | 28.85 | 22.20 | 39.28 | 30 | 19.38 | 12.20 | 28.39 | 1.73 | 0.99 | 3.05 | 0.053 |
| miR-363-3p | 30 | 28.85 | 21.48 | 39.28 | 31 | 22.30 | 18.62 | 29.28 | 1.35 | 0.76 | 2.40 | 0.302 |
| miR-376a-3p | 32 | 22.20 | 14.03 | 35.02 | 33 | 23.51 | 18.85 | 30.92 | 1.06 | 0.61 | 1.85 | 0.825 |
| miR-455-5p | 32 | 23.87 | 12.92 | 34.89 | 32 | 23.11 | 19.38 | 30.92 | 0.93 | 0.53 | 1.62 | 0.798 |
| miR-497-5p | 31 | 20.00 | 12.10 | 28.39 | 33 | 27.54 | 20.72 | 34.89 | 0.59 | 0.34 | 1.02 | 0.058 |
| miR-663a | 32 | 23.87 | 20.72 | 37.87 | 31 | 23.11 | 12.92 | 29.28 | 1.25 | 0.71 | 2.19 | 0.440 |
| miR-664-3p | 32 | 22.20 | 14.03 | 34.89 | 33 | 23.87 | 16.03 | 32.72 | 0.86 | 0.50 | 1.50 | 0.604 |
Figure 4Overall survival with respect to miR-7-5p expression. The continuous line represents patients with low miRNA expression values (
Figure 5Overall survival with respect to miR-10a-5p expression. The continuous line represents patients with low miRNA expression values (