Literature DB >> 34606244

Stabilization and Kinetics of an Adsorbed Protein Depends on the Poly(N-isopropylacrylamide) Grafting Density.

Zully Mora-Sierra, Gopika Gopan, Roger Chang, Deborah E Leckband, Martin Gruebele.   

Abstract

The solubility transition at the lower critical solution temperature (LCST, 32 °C) of poly(N-isopropylacrylamide) (PNIPAM) is widely used as a thermal switch to rapidly and reversibly capture and release proteins and cells. It is generally assumed that proteins adsorbed to PNIPAM above the LCST are unaffected by polymer interactions. Here we show that the folding stability of the enzyme phosphoglycerate kinase (PGK) is increased by interactions with end-grafted PNIPAM films above the LCST. We systematically compare two protein mutants with different stabilities. The stabilization mirrors the degree of protein adsorption under grafting conditions studied previously. Maximum stabilization occurs when proteins adsorb to low density, collapsed polymer "mushrooms". In the denser polymer "brush" regime, protein stabilization decreases back to a value indistinguishable from the bulk solution, consistent with low protein adsorption on dense, collapsed brushes. The temperature-dependent kinetics measured by Fast Relaxation Imaging reveals that PNIPAM does not affect the overall folding/unfolding mechanism. Based on the different stabilizations of two mutants and the relaxation kinetics, we hypothesize that the polymer acts mainly by increasing the conformational entropy of the folded protein by interacting with the protein surface and less by crowding the unfolded state of PGK.

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Year:  2021        PMID: 34606244      PMCID: PMC9326955          DOI: 10.1021/acs.biomac.1c00417

Source DB:  PubMed          Journal:  Biomacromolecules        ISSN: 1525-7797            Impact factor:   6.978


  30 in total

1.  Structure, function, and folding of phosphoglycerate kinase are strongly perturbed by macromolecular crowding.

Authors:  Apratim Dhar; Antonios Samiotakis; Simon Ebbinghaus; Lea Nienhaus; Dirar Homouz; Martin Gruebele; Margaret S Cheung
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

2.  Programmed adsorption and release of proteins in a microfluidic device.

Authors:  Dale L Huber; Ronald P Manginell; Michael A Samara; Byung-Il Kim; Bruce C Bunker
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

3.  The diffusion coefficient for PGK folding in eukaryotic cells.

Authors:  Apratim Dhar; Simon Ebbinghaus; Zhen Shen; Tripta Mishra; Martin Gruebele
Journal:  Biophys J       Date:  2010-11-03       Impact factor: 4.033

4.  Surface-Mediated Protein Unfolding as a Search Process for Denaturing Sites.

Authors:  James S Weltz; Daniel K Schwartz; Joel L Kaar
Journal:  ACS Nano       Date:  2015-11-25       Impact factor: 15.881

5.  Better biomolecule thermodynamics from kinetics.

Authors:  Kiran Girdhar; Gregory Scott; Yann R Chemla; Martin Gruebele
Journal:  J Chem Phys       Date:  2011-07-07       Impact factor: 3.488

6.  End-grafted low-molecular-weight PNIPAM does not collapse above the LCST.

Authors:  X Zhu; C Yan; F M Winnik; D Leckband
Journal:  Langmuir       Date:  2007-01-02       Impact factor: 3.882

7.  Control of protein-ligand recognition using a stimuli-responsive polymer.

Authors:  P S Stayton; T Shimoboji; C Long; A Chilkoti; G Chen; J M Harris; A S Hoffman
Journal:  Nature       Date:  1995-11-30       Impact factor: 49.962

8.  Simple fluidic system for purifying and concentrating diagnostic biomarkers using stimuli-responsive antibody conjugates and membranes.

Authors:  Allison L Golden; Charles F Battrell; Sean Pennell; Allan S Hoffman; James J Lai; Patrick S Stayton
Journal:  Bioconjug Chem       Date:  2010-10-20       Impact factor: 4.774

9.  Ternary protein adsorption onto brushes: strong versus weak.

Authors:  A Halperin; M Kröger
Journal:  Langmuir       Date:  2009-10-06       Impact factor: 3.882

10.  Direct observation of the phase transition for a poly(N-isopropylacryamide) layer grafted onto a solid surface by AFM and QCM-D.

Authors:  Naoyuki Ishida; Simon Biggs
Journal:  Langmuir       Date:  2007-09-29       Impact factor: 3.882

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