| Literature DB >> 34594506 |
Muyang Lu1,2, Lianming Gao3, Hongtao Li4, Fangliang He1,5.
Abstract
AIM: (1) To understand geographic patterns of species discovery by examining the effect of growth form, range size, and geographic distribution on discovery probability of vascular plant species in China; (2) to find out which taxa harbor the largest number of undiscovered species and where those species locate; and (3) to find out the determinants of province-level mean discovery time and inventory completeness. LOCATION: China.Entities:
Keywords: Flora of China; biodiversity hot spots; botanical discovery; conservation prioritization; species accumulation curve; survival analysis; taxonomic efforts
Year: 2021 PMID: 34594506 PMCID: PMC8462150 DOI: 10.1002/ece3.7971
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Cox proportional hazard model as a function of biological and geographic predictors for ~31,000 vascular plant species from China
| Effect size | Lower 95% | Upper 95% | Standard error | ||
|---|---|---|---|---|---|
| Growth form.fern | −0.82 | −0.87 | −0.76 | 0.03 | <.001 |
| Growth form.herb | −0.13 | −0.16 | −0.10 | 0.01 | <.001 |
| Growth form.vine.liana | −0.13 | −0.19 | −0.07 | 0.03 | <.001 |
| Range size | 0.51 | 0.39 | 0.63 | 0.06 | <.001 |
| Coast | 0.13 | 0.09 | 0.16 | 0.02 | <.001 |
| Maximum longitude | 0.90 | 0.80 | 0.99 | 0.05 | <.001 |
| Minimum longitude | −0.46 | −0.56 | −0.36 | 0.05 | <.001 |
| Maximum latitude | 0.67 | 0.57 | 0.78 | 0.07 | <.001 |
| Minimum latitude | −0.73 | −0.82 | −0.64 | 0.04 | <.001 |
Growth form was categorical data and tree/shrub was treated as the baseline category. N = 30,944. Concordance = 0.653 (SE = 0.002).
FIGURE 1Fitted survival curves of the Cox proportional hazard models (a) stratified on variable “growth form” and (b) “coast.” Dashed lines show 95% confidence intervals
Estimated species richness for different growth forms based on the logistic discovery model
| Number of discovered species | Estimated total number of species | Lower 95% bound | Upper 95% bound | Completeness (lower 95%‐) | |
|---|---|---|---|---|---|
| Fern | 1,921 | 2,712 | 749 | 4,676 | 0.622 (0.41‐) |
| Vine/Liana | 1,202 | 1,710 | 856 | 2,563 | 0.685 (0.47‐) |
| Herb | 18,370 | 23,867 | 16,982 | 30,752 | 0.737 (0.59‐) |
| Tree/Shrub | 9,451 | 12,998 | 8,855 | 15,741 | 0.754 (0.60‐) |
FIGURE 2(a–d) Species accumulation curves for four growth forms (based on 5‐year interval data). (e) Boxplot for discovery time of the four growth forms. “a” labels the groups with no significant difference in Turkey's range test
FIGURE 3(a) Distribution of mean province‐level species discovery time in China. (b) Distribution of species inventory completeness. Mollweide projection is used for mapping
FIGURE 4(a–c) Mean species discovery time against human population density, number of discovered species, and latitude. (d) Boxplot of mean discovery time for inland and coastal provinces. (e–g) Species inventory completeness against human population density, number of discovered species, and latitude. (h) Boxplot of inventory completeness for inland and coastal provinces. Solid lines show the fitted smooth spline curves
Linear regression of province‐level mean discovery time
| Coefficient | Lower 95% CI | Upper 95% CI | Standard error | ||
|---|---|---|---|---|---|
| Intercept | 1,902.22 | 1,889.93 | 1,914.52 | 6.27 | <.001 |
| Number of species | 35.79 | 20.43 | 51.14 | 7.83 | <.001 |
| Coast | −7.55 | −13.79 | −1.30 | 3.18 | .012 |
| Mean longitude | −17.98 | −30.28 | −5.68 | 6.27 | .004 |
| Mean latitude | −37.30 | −50.41 | −24.19 | 6.69 | <.001 |
Model with the minimum AIC was selected by step selection. Predictors standardized between 0 and 1. Adjusted R 2 = .87.
Beta regression of province‐level inventory completeness
| Coefficient | Lower 95% CI | Upper 95% CI | Standard error | ||
|---|---|---|---|---|---|
| Intercept | 1.29 | 1.04 | 1.55 | 0.13 | <.001 |
| Human population density | 0.78 | 0.38 | 1.19 | 0.21 | <.001 |
| Area | −0.85 | −1.28 | −0.43 | 0.22 | <.001 |
| Latitude | 2.01 | 1.63 | 2.40 | 0.19 | <.001 |
Model with the minimum AIC was selected by step selection. Predictors standardized between 0 and 1. Pseudo R 2 = .85.