Literature DB >> 34590692

CRISPR Cas9-Mediated Selective Isothermal Amplification for Sensitive Detection of Rare Mutant Alleles.

Junman Chen1,2, Tian Qiu3, Michael G Mauk2, Yaguang Fan4, Yong Jiang5, Jianming Ying3, Qinghua Zhou6, Youlin Qiao5, Haim H Bau2, Jinzhao Song1,2.   

Abstract

Entities:  

Keywords:  isothermal nucleic acids amplification; liquid biopsy; mutant allele enrichment; mutation detection; point-of-care testing; programmable endonuclease

Mesh：

Year:  2021        PMID： 34590692      PMCID： PMC8561782          DOI： 10.1093/clinchem/hvab163

Source DB:  PubMed          Journal:  Clin Chem        ISSN： 0009-9147            Impact factor:   8.327


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  5 in total

1.  Elimination of unaltered DNA in mixed clinical samples via nuclease-assisted minor-allele enrichment.

Authors:  Chen Song; Yibin Liu; Rachel Fontana; Alexander Makrigiorgos; Harvey Mamon; Matthew H Kulke; G Mike Makrigiorgos
Journal:  Nucleic Acids Res       Date:  2016-07-18       Impact factor: 16.971

2.  CUT-PCR: CRISPR-mediated, ultrasensitive detection of target DNA using PCR.

Authors:  S H Lee; J Yu; G-H Hwang; S Kim; H S Kim; S Ye; K Kim; J Park; D Y Park; Y-K Cho; J-S Kim; S Bae
Journal:  Oncogene       Date:  2017-08-28       Impact factor: 9.867

3.  Highly specific enrichment of rare nucleic acid fractions using Thermus thermophilus argonaute with applications in cancer diagnostics.

Authors:  Jinzhao Song; Jorrit W Hegge; Michael G Mauk; Junman Chen; Jacob E Till; Neha Bhagwat; Lotte T Azink; Jing Peng; Moen Sen; Jazmine Mays; Erica L Carpenter; John van der Oost; Haim H Bau
Journal:  Nucleic Acids Res       Date:  2020-02-28       Impact factor: 16.971

4.  DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.

Authors:  Samuel H Sternberg; Sy Redding; Martin Jinek; Eric C Greene; Jennifer A Doudna
Journal:  Nature       Date:  2014-01-29       Impact factor: 49.962

5.  Depletion of Abundant Sequences by Hybridization (DASH): using Cas9 to remove unwanted high-abundance species in sequencing libraries and molecular counting applications.

Authors:  W Gu; E D Crawford; B D O'Donovan; M R Wilson; E D Chow; H Retallack; J L DeRisi
Journal:  Genome Biol       Date:  2016-03-04       Impact factor: 13.583
  5 in total
  2 in total

1.  Programmable endonuclease combined with isothermal polymerase amplification to selectively enrich for rare mutant allele fractions.

Authors:  Junman Chen; Tian Qiud; Michael G Mauk; Zheng Su; Yaguang Fan; Dennis J Yuan; Qinghua Zhou; Youlin Qiao; Haim H Bau; Jianming Ying; Jinzhao Song
Journal:  Chin Chem Lett       Date:  2021-11-26       Impact factor: 8.455

Review 2.  Pre-PCR Mutation-Enrichment Methods for Liquid Biopsy Applications.

Authors:  Farzaneh Darbeheshti; Fangyan Yu; G Mike Makrigiorgos
Journal:  Cancers (Basel)       Date:  2022-06-27       Impact factor: 6.575
  2 in total

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