Literature DB >> 34586874

Historical Perspective on the Discovery of the Quasispecies Concept.

Esteban Domingo1,2, Carlos García-Crespo1, Celia Perales1,2,3.   

Abstract

Viral quasispecies are dynamic distributions of nonidentical but closely related mutant and recombinant viral genomes subjected to a continuous process of genetic variation, competition, and selection that may act as a unit of selection. The quasispecies concept owes its theoretical origins to a model for the origin of life as a collection of mutant RNA replicators. Independently, experimental evidence for the quasispecies concept was obtained from sampling of bacteriophage clones, which revealed that the viral populations consisted of many mutant genomes whose frequency varied with time of replication. Similar findings were made in animal and plant RNA viruses. Quasispecies became a theoretical framework to understand viral population dynamics and adaptability. The evidence came at a time when mutations were considered rare events in genetics, a perception that was to change dramatically in subsequent decades. Indeed, viral quasispecies was the conceptual forefront of a remarkable degree of biological diversity, now evident for cell populations and organisms, not only for viruses. Quasispecies dynamics unveiled complexities in the behavior of viral populations,with consequences for disease mechanisms and control strategies. This review addresses the origin of the quasispecies concept, its major implications on both viral evolution and antiviral strategies, and current and future prospects.

Entities:  

Keywords:  adaptation; antiviral strategies; lethal mutagenesis; mutation; mutation rate; population dynamics; residue conservation; sequence space

Mesh:

Substances:

Year:  2021        PMID: 34586874     DOI: 10.1146/annurev-virology-091919-105900

Source DB:  PubMed          Journal:  Annu Rev Virol        ISSN: 2327-056X            Impact factor:   10.431


  13 in total

1.  Plasticity in structure and assembly of SARS-CoV-2 nucleocapsid protein.

Authors:  Huaying Zhao; Ai Nguyen; Di Wu; Yan Li; Sergio A Hassan; Jiji Chen; Hari Shroff; Grzegorz Piszczek; Peter Schuck
Journal:  PNAS Nexus       Date:  2022-05-16

Review 2.  A Virus Is a Community: Diversity within Negative-Sense RNA Virus Populations.

Authors:  Lavinia J González Aparicio; Carolina B López; Sébastien A Felt
Journal:  Microbiol Mol Biol Rev       Date:  2022-06-23       Impact factor: 13.044

3.  Impact of Intrahost NS5 Nucleotide Variations on Dengue Virus Replication.

Authors:  Dayna Cheng; Sheng-Wen Huang; Wei-Xin Chin; Su-Jhen Hung; Huey-Pin Tsai; Justin Jang Hann Chu; Chiao-Hsuan Chao; Jen-Ren Wang
Journal:  Front Microbiol       Date:  2022-07-05       Impact factor: 6.064

4.  SARS-CoV-2 Mutant Spectra at Different Depth Levels Reveal an Overwhelming Abundance of Low Frequency Mutations.

Authors:  Brenda Martínez-González; María Eugenia Soria; Lucía Vázquez-Sirvent; Cristina Ferrer-Orta; Rebeca Lobo-Vega; Pablo Mínguez; Lorena de la Fuente; Carlos Llorens; Beatriz Soriano; Ricardo Ramos-Ruíz; Marta Cortón; Rosario López-Rodríguez; Carlos García-Crespo; Pilar Somovilla; Antoni Durán-Pastor; Isabel Gallego; Ana Isabel de Ávila; Soledad Delgado; Federico Morán; Cecilio López-Galíndez; Jordi Gómez; Luis Enjuanes; Llanos Salar-Vidal; Mario Esteban-Muñoz; Jaime Esteban; Ricardo Fernández-Roblas; Ignacio Gadea; Carmen Ayuso; Javier Ruíz-Hornillos; Nuria Verdaguer; Esteban Domingo; Celia Perales
Journal:  Pathogens       Date:  2022-06-08

5.  A Two-Level, Intramutant Spectrum Haplotype Profile of Hepatitis C Virus Revealed by Self-Organized Maps.

Authors:  Soledad Delgado; Celia Perales; Carlos García-Crespo; María Eugenia Soria; Isabel Gallego; Ana Isabel de Ávila; Brenda Martínez-González; Lucía Vázquez-Sirvent; Cecilio López-Galíndez; Federico Morán; Esteban Domingo
Journal:  Microbiol Spectr       Date:  2021-11-10

6.  Updated HIV-1 Consensus Sequences Change but Stay Within Similar Distance From Worldwide Samples.

Authors:  Gregorio V Linchangco; Brian Foley; Thomas Leitner
Journal:  Front Microbiol       Date:  2022-01-31       Impact factor: 6.064

Review 7.  RNA-Binding Proteins as Regulators of Internal Initiation of Viral mRNA Translation.

Authors:  Brenda López-Ulloa; Yazmín Fuentes; Magdalena S Pizarro-Ortega; Marcelo López-Lastra
Journal:  Viruses       Date:  2022-01-19       Impact factor: 5.048

8.  Plasticity in structure and assembly of SARS-CoV-2 nucleocapsid protein.

Authors:  Huaying Zhao; Ai Nguyen; Di Wu; Yan Li; Sergio A Hassan; Jiji Chen; Hari Shroff; Grzegorz Piszczek; Peter Schuck
Journal:  bioRxiv       Date:  2022-02-09

9.  SARS-CoV-2 Point Mutation and Deletion Spectra and Their Association with Different Disease Outcomes.

Authors:  Brenda Martínez-González; María Eugenia Soria; Lucía Vázquez-Sirvent; Cristina Ferrer-Orta; Rebeca Lobo-Vega; Pablo Mínguez; Lorena de la Fuente; Carlos Llorens; Beatriz Soriano; Ricardo Ramos; Marta Cortón; Rosario López-Rodríguez; Carlos García-Crespo; Isabel Gallego; Ana Isabel de Ávila; Jordi Gómez; Luis Enjuanes; Llanos Salar-Vidal; Jaime Esteban; Ricardo Fernandez-Roblas; Ignacio Gadea; Carmen Ayuso; Javier Ruíz-Hornillos; Nuria Verdaguer; Esteban Domingo; Celia Perales
Journal:  Microbiol Spectr       Date:  2022-03-29

Review 10.  Lethal Mutagenesis of RNA Viruses and Approved Drugs with Antiviral Mutagenic Activity.

Authors:  Ikbel Hadj Hassine; Manel Ben M'hadheb; Luis Menéndez-Arias
Journal:  Viruses       Date:  2022-04-18       Impact factor: 5.818

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