Literature DB >> 34582788

In vivo CRISPR screens identify the E3 ligase Cop1 as a modulator of macrophage infiltration and cancer immunotherapy target.

Xiaoqing Wang1, Collin Tokheim2, Shengqing Stan Gu1, Binbin Wang3, Qin Tang4, Yihao Li5, Nicole Traugh6, Zexian Zeng2, Yi Zhang2, Ziyi Li6, Boning Zhang1, Jingxin Fu7, Tengfei Xiao1, Wei Li2, Clifford A Meyer2, Jun Chu8, Peng Jiang2, Paloma Cejas9, Klothilda Lim9, Henry Long9, Myles Brown10, X Shirley Liu11.   

Abstract

Despite remarkable clinical efficacy of immune checkpoint blockade (ICB) in cancer treatment, ICB benefits for triple-negative breast cancer (TNBC) remain limited. Through pooled in vivo CRISPR knockout (KO) screens in syngeneic TNBC mouse models, we found that deletion of the E3 ubiquitin ligase Cop1 in cancer cells decreases secretion of macrophage-associated chemokines, reduces tumor macrophage infiltration, enhances anti-tumor immunity, and strengthens ICB response. Transcriptomics, epigenomics, and proteomics analyses revealed that Cop1 functions through proteasomal degradation of the C/ebpδ protein. The Cop1 substrate Trib2 functions as a scaffold linking Cop1 and C/ebpδ, which leads to polyubiquitination of C/ebpδ. In addition, deletion of the E3 ubiquitin ligase Cop1 in cancer cells stabilizes C/ebpδ to suppress expression of macrophage chemoattractant genes. Our integrated approach implicates Cop1 as a target for improving cancer immunotherapy efficacy in TNBC by regulating chemokine secretion and macrophage infiltration in the tumor microenvironment.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  C/ebpδ; CRISPR screening; Cop1; E3 ubiquitin ligase; immunotherapy; triple-negative breast cancer

Mesh:

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Year:  2021        PMID: 34582788      PMCID: PMC9136996          DOI: 10.1016/j.cell.2021.09.006

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   66.850


  135 in total

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Journal:  Science       Date:  2018-01-04       Impact factor: 47.728

2.  Therapeutic antitumor immunity by checkpoint blockade is enhanced by ibrutinib, an inhibitor of both BTK and ITK.

Authors:  Idit Sagiv-Barfi; Holbrook E K Kohrt; Debra K Czerwinski; Patrick P Ng; Betty Y Chang; Ronald Levy
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

3.  Human De-etiolated-1 regulates c-Jun by assembling a CUL4A ubiquitin ligase.

Authors:  Ingrid E Wertz; Karen M O'Rourke; Zemin Zhang; David Dornan; David Arnott; Raymond J Deshaies; Vishva M Dixit
Journal:  Science       Date:  2004-01-22       Impact factor: 47.728

4.  Transcription factor c-Jun activation represses mdr-1 gene expression.

Authors:  Ze-Hong Miao; Jian Ding
Journal:  Cancer Res       Date:  2003-08-01       Impact factor: 12.701

5.  Sequence determinants of improved CRISPR sgRNA design.

Authors:  Han Xu; Tengfei Xiao; Chen-Hao Chen; Wei Li; Clifford A Meyer; Qiu Wu; Di Wu; Le Cong; Feng Zhang; Jun S Liu; Myles Brown; X Shirley Liu
Journal:  Genome Res       Date:  2015-06-10       Impact factor: 9.043

6.  A draft network of ligand-receptor-mediated multicellular signalling in human.

Authors:  Jordan A Ramilowski; Tatyana Goldberg; Jayson Harshbarger; Edda Kloppmann; Edda Kloppman; Marina Lizio; Venkata P Satagopam; Masayoshi Itoh; Hideya Kawaji; Piero Carninci; Burkhard Rost; Alistair R R Forrest
Journal:  Nat Commun       Date:  2015-07-22       Impact factor: 14.919

7.  Simultaneous enumeration of cancer and immune cell types from bulk tumor gene expression data.

Authors:  Julien Racle; Kaat de Jonge; Petra Baumgaertner; Daniel E Speiser; David Gfeller
Journal:  Elife       Date:  2017-11-13       Impact factor: 8.140

8.  Determining cell type abundance and expression from bulk tissues with digital cytometry.

Authors:  Aaron M Newman; Chloé B Steen; Chih Long Liu; Andrew J Gentles; Aadel A Chaudhuri; Florian Scherer; Michael S Khodadoust; Mohammad S Esfahani; Bogdan A Luca; David Steiner; Maximilian Diehn; Ash A Alizadeh
Journal:  Nat Biotechnol       Date:  2019-05-06       Impact factor: 54.908

9.  Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology.

Authors:  Gregor Sturm; Francesca Finotello; Florent Petitprez; Jitao David Zhang; Jan Baumbach; Wolf H Fridman; Markus List; Tatsiana Aneichyk
Journal:  Bioinformatics       Date:  2019-07-15       Impact factor: 6.931

10.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

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  14 in total

Review 1.  CRISPR in cancer biology and therapy.

Authors:  Alyna Katti; Bianca J Diaz; Christina M Caragine; Neville E Sanjana; Lukas E Dow
Journal:  Nat Rev Cancer       Date:  2022-02-22       Impact factor: 60.716

2.  [Effects of ring finger and tryptophan-aspartic acid 2 on dendritic spines and synapse formation in cerebral cortex neurons of mice].

Authors:  T Sun; Y Wang; Z Fang; J Xu; S Ma; J Chang; G Liu; Y Guo; C Liu
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2022-01-20

Review 3.  Clinical relevance of tumour-associated macrophages.

Authors:  Mikael J Pittet; Olivier Michielin; Denis Migliorini
Journal:  Nat Rev Clin Oncol       Date:  2022-03-30       Impact factor: 66.675

4.  In vivo CRISPR screens reveal the landscape of immune evasion pathways across cancer.

Authors:  Juan Dubrot; Peter P Du; Sarah Kate Lane-Reticker; Emily A Kessler; Audrey J Muscato; Arnav Mehta; Samuel S Freeman; Peter M Allen; Kira E Olander; Kyle M Ockerman; Clara H Wolfe; Fabius Wiesmann; Nelson H Knudsen; Hsiao-Wei Tsao; Arvin Iracheta-Vellve; Emily M Schneider; Andrea N Rivera-Rosario; Ian C Kohnle; Hans W Pope; Austin Ayer; Gargi Mishra; Margaret D Zimmer; Sarah Y Kim; Animesh Mahapatra; Hakimeh Ebrahimi-Nik; Dennie T Frederick; Genevieve M Boland; W Nicholas Haining; David E Root; John G Doench; Nir Hacohen; Kathleen B Yates; Robert T Manguso
Journal:  Nat Immunol       Date:  2022-09-23       Impact factor: 31.250

5.  Mapping the Tumor Microenvironment in TNBC and Deep Exploration for M1 Macrophages-Associated Prognostic Genes.

Authors:  Baojin Xu; Hefen Sun; Xiaoqing Song; Qiqi Liu; Wei Jin
Journal:  Front Immunol       Date:  2022-06-30       Impact factor: 8.786

Review 6.  Nanomaterial-assisted CRISPR gene-engineering - A hallmark for triple-negative breast cancer therapeutics advancement.

Authors:  Jabeen Farheen; Narayan S Hosmane; Ruibo Zhao; Qingwei Zhao; M Zubair Iqbal; Xiangdong Kong
Journal:  Mater Today Bio       Date:  2022-10-04

Review 7.  Immune Checkpoint Blockades in Triple-Negative Breast Cancer: Current State and Molecular Mechanisms of Resistance.

Authors:  Hyungjoo Kim; Je-Min Choi; Kyung-Min Lee
Journal:  Biomedicines       Date:  2022-05-13

Review 8.  Going with the Flow: Modeling the Tumor Microenvironment Using Microfluidic Technology.

Authors:  Hongyan Xie; Jackson W Appelt; Russell W Jenkins
Journal:  Cancers (Basel)       Date:  2021-12-01       Impact factor: 6.575

Review 9.  CRISPR-Cas9 library screening approach for anti-cancer drug discovery: overview and perspectives.

Authors:  Yau-Tuen Chan; Yuanjun Lu; Junyu Wu; Cheng Zhang; Hor-Yue Tan; Zhao-Xiang Bian; Ning Wang; Yibin Feng
Journal:  Theranostics       Date:  2022-04-11       Impact factor: 11.600

Review 10.  Preclinical Evaluation of CAR T Cell Function: In Vitro and In Vivo Models.

Authors:  Xiaohui Si; Lu Xiao; Christine E Brown; Dongrui Wang
Journal:  Int J Mol Sci       Date:  2022-03-15       Impact factor: 5.923

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