Literature DB >> 34582771

Is developmental synchrony enabled by CTCF residence time?

Hsiao-Lin V Wang1, Victor G Corces2.   

Abstract

Depletion of CTCF in cultured cells has minor effects on transcription whereas its mutation leads to embryonic lethality and developmental defects. In a recent issue of Nature Cell Biology, Soochit et al. (2021) show that the residence time of CTCF on DNA may explain its critical role in cell differentiation.
Copyright © 2021 Elsevier Inc. All rights reserved.

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Year:  2021        PMID： 34582771      PMCID： PMC8883576          DOI： 10.1016/j.devcel.2021.09.003

Source DB:  PubMed          Journal:  Dev Cell        ISSN： 1534-5807            Impact factor:   13.417


  9 in total

1.  CTCF and cohesin regulate chromatin loop stability with distinct dynamics.

Authors:  Anders S Hansen; Iryna Pustova; Claudia Cattoglio; Robert Tjian; Xavier Darzacq
Journal:  Elife       Date:  2017-05-03       Impact factor: 8.140

2.  CTCF chromatin residence time controls three-dimensional genome organization, gene expression and DNA methylation in pluripotent cells.

Authors:  Widia Soochit; Frank Sleutels; Gregoire Stik; Frank Grosveld; Ralph Stadhouders; Niels Galjart; Marek Bartkuhn; Sreya Basu; Silvia C Hernandez; Sarra Merzouk; Enrique Vidal; Ruben Boers; Joachim Boers; Michael van der Reijden; Bart Geverts; Wiggert A van Cappellen; Mirjam van den Hout; Zeliha Ozgur; Wilfred F J van IJcken; Joost Gribnau; Rainer Renkawitz; Thomas Graf; Adriaan Houtsmuller
Journal:  Nat Cell Biol       Date:  2021-07-29       Impact factor: 28.824

Review 3.  Developing in 3D: the role of CTCF in cell differentiation.

Authors:  Rodrigo G Arzate-Mejía; Félix Recillas-Targa; Victor G Corces
Journal:  Development       Date:  2018-03-22       Impact factor: 6.868

4.  Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites.

Authors:  Maolu Yin; Jiuyu Wang; Min Wang; Xinmei Li; Mo Zhang; Qiang Wu; Yanli Wang
Journal:  Cell Res       Date:  2017-10-27       Impact factor: 25.617

5.  Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.

Authors:  Hideharu Hashimoto; Dongxue Wang; John R Horton; Xing Zhang; Victor G Corces; Xiaodong Cheng
Journal:  Mol Cell       Date:  2017-05-18       Impact factor: 17.970

6.  A genome-wide map of CTCF multivalency redefines the CTCF code.

Authors:  Hirotaka Nakahashi; Kyong-Rim Kieffer Kwon; Wolfgang Resch; Laura Vian; Marei Dose; Diana Stavreva; Ofir Hakim; Nathanael Pruett; Steevenson Nelson; Arito Yamane; Jason Qian; Wendy Dubois; Scott Welsh; Robert D Phair; B Franklin Pugh; Victor Lobanenkov; Gordon L Hager; Rafael Casellas
Journal:  Cell Rep       Date:  2013-05-23       Impact factor: 9.423

Review 7.  Organizational principles of 3D genome architecture.

Authors:  M Jordan Rowley; Victor G Corces
Journal:  Nat Rev Genet       Date:  2018-12       Impact factor: 53.242

8.  Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.

Authors:  Elphège P Nora; Anton Goloborodko; Anne-Laure Valton; Johan H Gibcus; Alec Uebersohn; Nezar Abdennur; Job Dekker; Leonid A Mirny; Benoit G Bruneau
Journal:  Cell       Date:  2017-05-18       Impact factor: 41.582

9.  CTCF variants in 39 individuals with a variable neurodevelopmental disorder broaden the mutational and clinical spectrum.

Authors:  Enrico D H Konrad; Niels Nardini; Almuth Caliebe; Inga Nagel; Dana Young; Gabriella Horvath; Stephanie L Santoro; Christine Shuss; Alban Ziegler; Dominique Bonneau; Marlies Kempers; Rolph Pfundt; Eric Legius; Arjan Bouman; Kyra E Stuurman; Katrin Õunap; Sander Pajusalu; Monica H Wojcik; Georgia Vasileiou; Gwenaël Le Guyader; Hege M Schnelle; Siren Berland; Evelien Zonneveld-Huijssoon; Simone Kersten; Aditi Gupta; Patrick R Blackburn; Marissa S Ellingson; Matthew J Ferber; Radhika Dhamija; Eric W Klee; Meriel McEntagart; Klaske D Lichtenbelt; Amy Kenney; Samantha A Vergano; Rami Abou Jamra; Konrad Platzer; Mary Ella Pierpont; Divya Khattar; Robert J Hopkin; Richard J Martin; Marjolijn C J Jongmans; Vivian Y Chang; Julian A Martinez-Agosto; Outi Kuismin; Mitja I Kurki; Olli Pietiläinen; Aarno Palotie; Timothy J Maarup; Diana S Johnson; Katja Venborg Pedersen; Lone W Laulund; Sally A Lynch; Moira Blyth; Katrina Prescott; Natalie Canham; Rita Ibitoye; Eva H Brilstra; Marwan Shinawi; Emily Fassi; Heinrich Sticht; Anne Gregor; Hilde Van Esch; Christiane Zweier
Journal:  Genet Med       Date:  2019-06-26       Impact factor: 8.822
  9 in total

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