| Literature DB >> 34580550 |
Ali Abbasian Ardakani1, Robert M Kwee2, Mohammad Mirza-Aghazadeh-Attari3, Horacio Matías Castro4, Taha Yusuf Kuzan5, Kübra Murzoğlu Altintoprak5, Giulia Besutti6,7, Filippo Monelli6,7, Fariborz Faeghi1, U Rajendra Acharya8,9,10, Afshin Mohammadi11.
Abstract
Computed tomography has gained an important role in the early diagnosis of COVID-19 pneumonia. However, the ever-increasing number of patients has overwhelmed radiology departments and has caused a reduction in quality of services. Artificial intelligence (AI) systems are the remedy to the current situation. However, the lack of application in real-world conditions has limited their consideration in clinical settings. This study validated a clinical AI system, COVIDiag, to aid radiologists in accurate and rapid evaluation of COVID-19 cases. 50 COVID-19 and 50 non-COVID-19 pneumonia cases were included from each of five centers: Argentina, Turkey, Iran, Netherlands, and Italy. The Dutch database included only 50 COVID-19 cases. The performance parameters namely sensitivity, specificity, accuracy, and area under the ROC curve (AUC) were computed for each database using COVIDiag model. The most common pattern of involvement among COVID-19 cases in all databases were bilateral involvement of upper and lower lobes with ground-glass opacities. The best sensitivity of 92.0% was recorded for the Italian database. The system achieved an AUC of 0.983, 0.914, 0.910, and 0.882 for Argentina, Turkey, Iran, and Italy, respectively. The model obtained a sensitivity of 86.0% for the Dutch database. COVIDiag model could diagnose COVID-19 pneumonia in all of cohorts with AUC of 0.921 (sensitivity, specificity, and accuracy of 88.8%, 87.0%, and 88.0%, respectively). Our study confirmed the accuracy of our proposed AI model (COVIDiag) in the diagnosis of COVID-19 cases. Furthermore, the system demonstrated consistent optimal diagnostic performance on multinational databases, which is critical to determine the generalizability and objectivity of the proposed COVIDiag model. Our results are significant as they provide real-world evidence regarding the applicability of AI systems in clinical medicine.Entities:
Keywords: Artificial intelligence; Coronavirus infections; Machine learning; Pneumonia; Tomography, X-ray computed
Year: 2021 PMID: 34580550 PMCID: PMC8457921 DOI: 10.1016/j.patrec.2021.09.012
Source DB: PubMed Journal: Pattern Recognit Lett ISSN: 0167-8655 Impact factor: 3.756
Fig. 1Geographical distribution of databases used in this study.
Computed tomography parameters of five centers used in this study.
| Center | Scanner | Tube voltage, kVp | Tube current, mAs | Pitch | Matrix | Reconstruction slice thickness, mm | Reconstruction algorithm |
|---|---|---|---|---|---|---|---|
| Argentina | Canon Aquilion 64 | 120 | 50-100 | 1.5 | 512 × 512 | 1 | Adaptive iterative Dose Reduction 3D (AIDR3D) |
| Canon Activion 16 | 120 | 50-100 | 0.9 | 512 × 512 | 2 | Adaptive iterative Dose Reduction 3D (AIDR3D) | |
| Turkey | GE Optima 520 | 120 | 100-200 | 0.8-2.0 | 512 × 512 | 1.25 | Adaptive Statistical Iterative Reconstruction (ASIR) |
| Iran | Siemens SOMATOM scope | 120 | 50-100 | 0.8-1.5 | 512 × 512 | 1.5 | Model-based iterative reconstruction (MBIR) |
| The Netherlands | Philips Incisive | 120 | 73 | 1.0 | 512 × 512 | 1 | Iterative |
| Siemens SOMATOM Definition Flash | 120 | 85 | 1.2 | 512 × 512 | 1 | Iterative | |
| Italy | Siemens SOMATOM Definition Edge | 120 | 50–150 | 1.2 | 512 × 512 | 1 | Advanced Modeled Iterative Reconstruction (ADMIRE) |
CT chest findings of COVID-19 and non-COVID-19 groups based on each center.
| CT Findings | Database | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Location 1 | |||||||||
| Unilateral | 1 (2.0) | 14 (28.0) | 8 (16.0) | 17 (34.0) | 7 (14.0) | 19 (38.0) | 0 (0.0) | 9 (18.0) | 5 (10.0) |
| Bilateral | 49 (98.0) | 36 (72.0) | 42 (84.0) | 33 (66.0) | 43 (86.0) | 31 (62.0) | 50 (100) | 41 (82.0) | 45 (90.0) |
| Location 2 | |||||||||
| Lower Lobe | 15 (30.0) | 18 (36.0) | 17 (34.0) | 10 (20.0) | 5 (10.0) | 12 (24.0) | 0 (0.0) | 10 (20.0) | 5 (10.0) |
| Upper Lobe | 0 (0.0) | 5 (10.0) | 2 (4.0) | 6 (12.0) | 4 (8.0) | 25 (50.0) | 1 (2.0) | 2 (4.0) | 0 (0.0) |
| Both Lobes | 35 (70.0) | 27 (54.0) | 31 (62.0) | 34 (68.0) | 41 (82.0) | 13 (26.0) | 49 (98.0) | 38 (76.0) | 45 (90.0) |
| Distribution | |||||||||
| Peripheral | 31 (62.0) | 6 (12.0) | 34 (68.0) | 3 (6.0) | 37 (74.0) | 8 (16.0) | 5 (10.0) | 13 (26.0) | 26 (52.0) |
| Central | 0 (0.0) | 17 (34.0) | 0 (0.0) | 1 (2.0) | 4 (8.0) | 22 (44.0) | 0 (0.0) | 3 (6.0) | 0 (0.0) |
| Both Central and Peripheral | 19 (38.0) | 27 (54.0) | 16 (32.0) | 46 (92.0) | 9 (18.0) | 20 (40.0) | 45 (90.0) | 34 (68.0) | 24 (48.0) |
| Lesion | |||||||||
| Single | 1 (2.0) | 12 (24.0) | 6 (12.0) | 5 (10.0) | 7 (14.0) | 15 (30.0) | 0 (0.0) | 4 (8.0) | 4 (8.0) |
| Multiple | 34 (68.0) | 33 (66.0) | 40 (80.0) | 26 (52.0) | 35 (70.0) | 29 (58.0) | 2 (4.0) | 23 (46.0) | 26 (52.0) |
| Diffuse | 15 (30.0) | 5 (10.0) | 4 (8.0) | 19 (38.0) | 8 (16.0) | 6 (12.0) | 48 (96.0) | 23 (46.0) | 20 (40.0) |
| GGO | |||||||||
| No | 4 (8.0) | 38 (76.0) | 0 (0.0) | 4 (8.0) | 1 (2.0) | 34 (68.0) | 2 (4.0) | 11 (22.0) | 1 (2.0) |
| Yes | 46 (92.0) | 12 (24.0) | 50 (100) | 46 (92.0) | 49 (98.0) | 16 (32.0) | 48 (96.0) | 39 (78.0) | 49 (98.0) |
| Consolidation | |||||||||
| No | 29 (58.0) | 11 (22.0) | 33 (66.0) | 8 (16.0) | 29 (58.0) | 26 (52.0) | 31 (62.0) | 15 (30.0) | 28 (56.0) |
| Yes | 21 (42.0) | 39 (78.0) | 17 (34.0) | 42 (84.0) | 21 (42.0) | 24 (48.0) | 19 (38.0) | 35 (70.0) | 22 (44.0) |
| Reticular | |||||||||
| No | 27 (54.0) | 44 (88.0) | 44 (88.0) | 33 (66.0) | 47 (94.0) | 21 (42.0) | 8 (16.0) | 9 (18.0) | 46 (92.0) |
| Yes | 23 (46.0) | 6 (12.0) | 6 (12.0) | 17 (34.0) | 3 (6.0) | 29 (58.0) | 42 (84.0) | 41 (82.0) | 4 (8.0) |
| Nodule | |||||||||
| No | 48 (96.0) | 21 (42.0) | 48 (96.0) | 21 (42.0) | 42 (84.0) | 32 (64.0) | 48 (96.0) | 26 (52.0) | 49 (98.0) |
| Yes | 2 (4.0) | 29 (58.0) | 2 (4.0) | 29 (58.0) | 8 (16.0) | 18 (36.0) | 2 (4.0) | 24 (48.0) | 1 (2.0) |
| Bronchial Wall Thickening | |||||||||
| No | 46 (92.0) | 37 (74.0) | 47 (94.0) | 11 (22.0) | 30 (60.0) | 31 (62.0) | 47 (94.0) | 22 (44.0) | 47 (94.0) |
| Yes | 4 (8.0) | 13 (26.0) | 3 (6.0) | 39 (78.0) | 20 (40.0) | 19 (38.0) | 3 (6.0) | 28 (56.0) | 3 (6.0) |
| Air Bronchogram | |||||||||
| No | 43 (86.0) | 38 (76.0) | 47 (94.0) | 22 (44.0) | 34 (68.0) | 48 (96.0) | 36 (72.0) | 22 (44.0) | 39 (78.0) |
| Yes | 7 (14.0) | 12 (24.0) | 3 (6.0) | 28 (56.0) | 16 (32.0) | 2 (4.0) | 14 (28.0) | 28 (56.0) | 11 (22.0) |
| Cavity | |||||||||
| No | 50 (100) | 43 (86.0) | 50 (100) | 50 (100) | 50 (100) | 47 (94.0) | 50 (100) | 46 (92.0) | 48 (96.0) |
| Yes | 0 (0.0) | 7 (14.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 3 (6.0) | 0 (0.0) | 4 (8.0) | 2 (4.0) |
| Crazy Paving | |||||||||
| No | 35 (70.0) | 50 (100) | 47 (94.0) | 48 (96.0) | 36 (72.0) | 42 (84.0) | 32 (64.0) | 42 (84.0) | 37 (74.0) |
| Yes | 15 (30.0) | 0 (0.0) | 3 (6.0) | 2 (4.0) | 14 (28.0) | 8 (16.0) | 18 (36.0) | 8 (16.0) | 13 (26.0) |
| Pleural Effusion | |||||||||
| No | 47 (94.0) | 36 (72.0) | 50 (100) | 35 (70.0) | 43 (86.0) | 37 (74.0) | 50 (100) | 31 (62.0) | 44 (88.0) |
| Yes | 3 (6.0) | 14 (28.0) | 0 (0.0) | 15 (30.0) | 7 (14.0) | 13 (26.0) | 0 (0.0) | 19 (38.0) | 6 (12.0) |
| Pleural Thickening | |||||||||
| No | 50 (100) | 47 (94.0) | 43 (86.0) | 32 (64.0) | 50 (100) | 45 (90.0) | 47 (94.0) | 40 (80.0) | 48 (96.0) |
| Yes | 0 (0.0) | 3 (6.0) | 7 (14.0) | 18 (36.0) | 0 (0.0) | 5 (10.0) | 3 (6.0) | 10 (20.0) | 2 (4.0) |
| Lymphadenopathy | |||||||||
| No | 45 (90.0) | 48 (96.0) | 46 (92.0) | 38 (76.0) | 47 (94.0) | 33 (66.0) | 48 (96.0) | 35 (70.0) | 45 (90.0) |
| Yes | 5 (10.0) | 2 (4.0) | 4 (8.0) | 12 (24.0) | 3 (6.0) | 17 (34.0) | 2 (4.0) | 15 (30.0) | 5 (10.0) |
Summary of developed AI systems for COVID-19 diagnosis.
| DensNet121 | United States | 984 (296) | COVID-19, non-COVID-19 (Viral, Bacterial, Fungal) | Six centers, four countries (China, Italy, Japan, USA) | NA/NA | NA/NA | NA/91.70 | NA/NA | 1337 | Six centers from four countries (China, Italy, Japan, USA) | 84.00 | 93.00 | 90.80 | 0.949 | |
| Inception | Netherlands | 476 (105) | Negative, positive COVID-19 | Two centers, Netherlands | NA/85.7 | NA/89.8 | NA/NA | NA/0.950 | 262 | One center, Netherlands | 82.00 | 80.50 | NA | 0.880 | |
| ResNet18 | China | 2246 (260) | COVID-19, non-COVID-19 (Viral, Bacterial, Mycoplasma), and Normal | Seven centers from China | NA/94.93 | NA/91.13 | NA/92.49 | NA/0.979 | 208 | Yichang, China | 92.51 | 85.92 | 90.70 | 0.971 | |
| 242 | Hefei, China | 94.74 | 89.19 | 90.32 | 0.970 | ||||||||||
| 409 | Wuhan, China | 94.03 | 88.46 | 91.20 | 0.961 | ||||||||||
| 140 | Guangzhou, China | 90.00 | 84.15 | 84.78 | 0.951 | ||||||||||
| 107 | Ecuador | 86.67 | 82.26 | 84.11 | 0.905 | ||||||||||
| DenseNet | China | 709 (NA) | COVID-19, non-COVID-19 (Viral, Bacterial, Mycoplasma, Fungal) | Two centers from China | 78.93/NA | 89.93/NA | 81.24/NA | 0.900/NA | 161 | Heilongjiang, China | 79.35 | 81.16 | 80.12 | 0.880 | |
| 226 | Anhui, China | 80.39 | 76.61 | 78.32 | 0.870 | ||||||||||
| U-Net based algorithm | China | 2447(639) | COVID-19, non-COVID-19 | Two centers from China | NA/97.30 | NA/85.00 | NA/NA | NA/0.985 | 369 (820 scans) | Xianning, China | 83.90 | 66.00 | NA | 0.837 | |
| 411 (1097 Scans) | Tianyou, China | 90.70 | 38.60 | NA | 0.725 | ||||||||||
| 130 (203 scans) | Xiangy, China | 83.30 | 51.70 | NA | 0.679 | ||||||||||
| ResNet152 | China | 2688 (2688) | COVID-19, non-COVID-19 pneumonia (Viral and Bacterial) | Three centers from China | NA/87.30 | NA/96.60 | NA/NA | NA/0.974 | 2539 | Seven centers, China | 78.00 | 93.50 | NA | 0.921 | |
| This study | Ensemble learning | Iran | 488 (124) | COVID-19, and non-COVID-19 (Viral, Atypical) | Single center | 94.67/93.54 | 93.03/90.32 | 93.85/91.94 | 0.988/0.965 | 100 | Argentina | 90.0 | 96.0 | 93.0 | 0.983 |
| 100 | Turkey | 86.0 | 88.0 | 87.0 | 0.914 | ||||||||||
| 100 | Iran | 90.0 | 84.0 | 87.0 | 0.910 | ||||||||||
| 100 | Italy | 92.0 | 80.0 | 86.0 | 0.882 | ||||||||||
| 50 | The Netherlands | 86.0 | NA | NA | NA | ||||||||||
Sen, Sensitivity; Spc, Specificity, Acc, Accuracy, AUC, Area under the ROC curve
Fig. 2(a) ROC curves and (b) radar plots of COVIDiag model on different centers. Sen, sensitivity; Spc, specificity; Acc, accuracy; AUC, area under the ROC curve.